BLASTX nr result

ID: Chrysanthemum21_contig00031873 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00031873
         (522 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021972286.1| F-box/FBD/LRR-repeat protein At1g13570-like ...    40   4e-06

>ref|XP_021972286.1| F-box/FBD/LRR-repeat protein At1g13570-like [Helianthus annuus]
 ref|XP_021972287.1| F-box/FBD/LRR-repeat protein At1g13570-like [Helianthus annuus]
 ref|XP_021972288.1| F-box/FBD/LRR-repeat protein At1g13570-like [Helianthus annuus]
 ref|XP_021972289.1| F-box/FBD/LRR-repeat protein At1g13570-like [Helianthus annuus]
 gb|OTG19842.1| putative F-box domain, Leucine-rich repeat domain, L domain-like
           protein [Helianthus annuus]
          Length = 386

 Score = 40.0 bits (92), Expect(3) = 4e-06
 Identities = 26/78 (33%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
 Frame = +1

Query: 169 LTL*TAEMSLIVATIPPSLTYLNVIPVIESLTVPICILQSFVHDR----VPPA*IHLKYF 336
           LTL  A   +    +   +  L  +PVIE L V    ++ F+  R    +P A +HLKY 
Sbjct: 203 LTLDNASTFICDDEVTTIVDLLECLPVIEYLYVVFSFVEDFLRWRHPKELPTALVHLKYL 262

Query: 337 HTNEISFTHKDGLSFFVL 390
             +++SF+H  GL F  L
Sbjct: 263 CIHDLSFSHIYGLPFLAL 280



 Score = 28.9 bits (63), Expect(3) = 4e-06
 Identities = 14/27 (51%), Positives = 18/27 (66%)
 Frame = +2

Query: 107 YATRLSLFSFRLLTILCLSGSSLYEQQ 187
           Y   +SLFS   LT L LSG +LY+Q+
Sbjct: 141 YKLPISLFSLHQLTSLYLSGCALYQQR 167



 Score = 28.5 bits (62), Expect(3) = 4e-06
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +3

Query: 378 FFCAFLRNSPSLEKLKIENKVFDQDDSSMEDDLCTEDEIYSFTVDSY 518
           F    +R+SP+LEKLK+           M D+   E E+ SFT++ Y
Sbjct: 277 FLALLIRSSPNLEKLKL----------VMYDEDLEEYEMGSFTLEDY 313


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