BLASTX nr result

ID: Chrysanthemum21_contig00031658 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00031658
         (441 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022015556.1| probable RNA-dependent RNA polymerase 5 [Hel...    56   3e-06

>ref|XP_022015556.1| probable RNA-dependent RNA polymerase 5 [Helianthus annuus]
 gb|OTF91152.1| putative RNA-dependent RNA polymerase family protein [Helianthus
           annuus]
          Length = 1089

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/36 (75%), Positives = 30/36 (83%)
 Frame = +1

Query: 193 DESGCILYDELGEPTIQTDGTGFIS*DLAVLVLNDF 300
           DE+GC + DE GEP+I TDGTGFIS DLAVLV NDF
Sbjct: 473 DENGCTVCDEDGEPSIHTDGTGFISEDLAVLVPNDF 508


Top