BLASTX nr result

ID: Chrysanthemum21_contig00030933 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030933
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTG38162.1| putative F-box/RNI-like/FBD-like domains-containi...    74   1e-12
ref|XP_021984933.1| F-box protein At4g22280-like [Helianthus ann...    71   1e-11
gb|KVH99992.1| F-box domain, cyclin-like protein [Cynara cardunc...    64   4e-09
ref|XP_022031683.1| FBD-associated F-box protein At2g26860-like ...    64   6e-09
ref|XP_022031685.1| FBD-associated F-box protein At2g26860-like ...    59   3e-07

>gb|OTG38162.1| putative F-box/RNI-like/FBD-like domains-containing protein
           [Helianthus annuus]
          Length = 450

 Score = 73.9 bits (180), Expect = 1e-12
 Identities = 33/70 (47%), Positives = 50/70 (71%)
 Frame = +3

Query: 3   PSCLRLKIKEIVILNQDSVSQLEFTFIRYLLKHGVSLERLTINVPTVDPERREELLSIHR 182
           P CLR K+K+I+I+N+++++  E   I+YLLK    LE LTIN   +DP+RRE++L  +R
Sbjct: 381 PPCLRFKMKKIIIVNRETITPEELKLIKYLLKRANHLEILTINAHKIDPKRREQVLKFYR 440

Query: 183 GSSLCQIQFV 212
            S  C+I+FV
Sbjct: 441 ASKSCRIEFV 450


>ref|XP_021984933.1| F-box protein At4g22280-like [Helianthus annuus]
 gb|OTG38158.1| putative F-box/RNI-like superfamily protein [Helianthus annuus]
          Length = 452

 Score = 71.2 bits (173), Expect = 1e-11
 Identities = 33/70 (47%), Positives = 48/70 (68%)
 Frame = +3

Query: 3   PSCLRLKIKEIVILNQDSVSQLEFTFIRYLLKHGVSLERLTINVPTVDPERREELLSIHR 182
           P+CLR K+K+I I N+++V+  E   I Y+LKH   LE LTIN   +DP+ R ++L  +R
Sbjct: 383 PTCLRFKMKKITIKNRETVTPEELKLISYMLKHANHLEILTINAHKIDPKTRGQVLKFYR 442

Query: 183 GSSLCQIQFV 212
           GS  C+I+FV
Sbjct: 443 GSKSCRIEFV 452


>gb|KVH99992.1| F-box domain, cyclin-like protein [Cynara cardunculus var.
           scolymus]
          Length = 407

 Score = 63.9 bits (154), Expect = 4e-09
 Identities = 34/70 (48%), Positives = 44/70 (62%)
 Frame = +3

Query: 3   PSCLRLKIKEIVILNQDSVSQLEFTFIRYLLKHGVSLERLTINVPTVDPERREELLSIHR 182
           P CLR KI EI I N++ V Q EF  IRYLL+H  +L    IN    D + RE LLS+ R
Sbjct: 338 PGCLRHKITEITICNREPVIQEEFGLIRYLLQHSTNLRIFRINGHRNDSKSRERLLSLPR 397

Query: 183 GSSLCQIQFV 212
           GS+  +++FV
Sbjct: 398 GSNQSRVEFV 407


>ref|XP_022031683.1| FBD-associated F-box protein At2g26860-like [Helianthus annuus]
          Length = 471

 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 28/58 (48%), Positives = 42/58 (72%)
 Frame = +3

Query: 3   PSCLRLKIKEIVILNQDSVSQLEFTFIRYLLKHGVSLERLTINVPTVDPERREELLSI 176
           P CLR K+K+I+I+N+++++  E   IRYLLKH   LE LT+N   +DP+RRE+ L +
Sbjct: 361 PPCLRFKMKKIIIVNRETITPKELKLIRYLLKHANHLEILTMNAHKIDPKRREQCLKM 418


>ref|XP_022031685.1| FBD-associated F-box protein At2g26860-like [Helianthus annuus]
          Length = 462

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 26/54 (48%), Positives = 39/54 (72%)
 Frame = +3

Query: 3   PSCLRLKIKEIVILNQDSVSQLEFTFIRYLLKHGVSLERLTINVPTVDPERREE 164
           P CLR K+K+I+I+N+++++  E   I+YLLK    LE LTIN   +DP+RRE+
Sbjct: 381 PPCLRFKMKKIIIVNRETITPEELKLIKYLLKRANHLEILTINAHKIDPKRREQ 434


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