BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030909
         (483 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021977832.1| U2 small nuclear ribonucleoprotein B'' [Heli...    55   6e-06
ref|XP_023728799.1| U2 small nuclear ribonucleoprotein B'' [Lact...    55   7e-06
gb|KVH94113.1| Nucleotide-binding, alpha-beta plait [Cynara card...    54   9e-06

>ref|XP_021977832.1| U2 small nuclear ribonucleoprotein B'' [Helianthus annuus]
 gb|OTG18937.1| putative U2 small nuclear ribonucleoprotein B [Helianthus annuus]
          Length = 226

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +3

Query: 141 NENQSSTAMQSLQGFKITPQNSMAISYA 224
           +EN+SSTAMQSLQGFKITPQNSMAISYA
Sbjct: 197 DENESSTAMQSLQGFKITPQNSMAISYA 224


>ref|XP_023728799.1| U2 small nuclear ribonucleoprotein B'' [Lactuca sativa]
 gb|PLY77688.1| hypothetical protein LSAT_9X14560 [Lactuca sativa]
          Length = 229

 Score = 54.7 bits (130), Expect = 7e-06
 Identities = 26/28 (92%), Positives = 28/28 (100%)
 Frame = +3

Query: 141 NENQSSTAMQSLQGFKITPQNSMAISYA 224
           ++NQSSTAMQSLQGFKITPQNSMAISYA
Sbjct: 200 DDNQSSTAMQSLQGFKITPQNSMAISYA 227


>gb|KVH94113.1| Nucleotide-binding, alpha-beta plait [Cynara cardunculus var.
           scolymus]
          Length = 174

 Score = 53.5 bits (127), Expect = 9e-06
 Identities = 25/28 (89%), Positives = 28/28 (100%)
 Frame = +3

Query: 141 NENQSSTAMQSLQGFKITPQNSMAISYA 224
           ++NQSSTAMQSLQGFKITPQNSM+ISYA
Sbjct: 145 DDNQSSTAMQSLQGFKITPQNSMSISYA 172