BLASTX nr result

ID: Chrysanthemum21_contig00030893 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030893
         (663 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97754.1| hypothetical protein Ccrd_000113, partial [Cynara...    61   3e-07
gb|PLY87385.1| hypothetical protein LSAT_4X7801 [Lactuca sativa]       60   1e-06
ref|XP_023761311.1| paired amphipathic helix protein Sin3-like 3...    60   1e-06
gb|KVH96088.1| hypothetical protein Ccrd_001827 [Cynara carduncu...    58   4e-06

>gb|KVH97754.1| hypothetical protein Ccrd_000113, partial [Cynara cardunculus var.
           scolymus]
          Length = 1172

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -1

Query: 663 LCLREKVKKRLHN*DNYRKFLSCIVHYSTESITRSNLENLV 541
           LCLREKVK+RL N D+Y+ FL CIVHY TE+ITR  L++LV
Sbjct: 369 LCLREKVKERLRNSDDYQAFLKCIVHYCTENITRPQLQSLV 409


>gb|PLY87385.1| hypothetical protein LSAT_4X7801 [Lactuca sativa]
          Length = 1107

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = -1

Query: 663 LCLREKVKKRLHN*DNYRKFLSCIVHYSTESITRSNLENLV 541
           + LREKVK+RLHN D+Y+ FL CIVHY TE+ITR  L++LV
Sbjct: 289 ISLREKVKERLHNSDDYQAFLKCIVHYCTENITRPQLQSLV 329


>ref|XP_023761311.1| paired amphipathic helix protein Sin3-like 3 [Lactuca sativa]
 ref|XP_023761312.1| paired amphipathic helix protein Sin3-like 3 [Lactuca sativa]
          Length = 1136

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 27/41 (65%), Positives = 34/41 (82%)
 Frame = -1

Query: 663 LCLREKVKKRLHN*DNYRKFLSCIVHYSTESITRSNLENLV 541
           + LREKVK+RLHN D+Y+ FL CIVHY TE+ITR  L++LV
Sbjct: 318 ISLREKVKERLHNSDDYQAFLKCIVHYCTENITRPQLQSLV 358


>gb|KVH96088.1| hypothetical protein Ccrd_001827 [Cynara cardunculus var. scolymus]
          Length = 1450

 Score = 58.2 bits (139), Expect = 4e-06
 Identities = 27/41 (65%), Positives = 32/41 (78%)
 Frame = -1

Query: 663 LCLREKVKKRLHN*DNYRKFLSCIVHYSTESITRSNLENLV 541
           LCLREKVK+RL N D+Y+ FL CI HY TE ITR  L++LV
Sbjct: 353 LCLREKVKERLSNADDYQAFLKCIAHYCTEIITRPQLQSLV 393


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