BLASTX nr result

ID: Chrysanthemum21_contig00030677 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030677
         (489 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10491.1| hypothetical protein Ccrd_011090, partial [Cynara...    60   3e-07
ref|XP_021992897.1| WD repeat-containing protein 44 [Helianthus ...    55   8e-06

>gb|KVI10491.1| hypothetical protein Ccrd_011090, partial [Cynara cardunculus var.
            scolymus]
          Length = 981

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 32/44 (72%), Positives = 35/44 (79%)
 Frame = -1

Query: 489  SSATNGYSFDRMSATWPEEKLVSAAAKNRSCRTSVALLD*MSPG 358
            SSA+NGY FDR+SATWPEEKLV  A KNRS RTSV   + MSPG
Sbjct: 910  SSASNGYFFDRISATWPEEKLV-LATKNRSPRTSVDYTNGMSPG 952


>ref|XP_021992897.1| WD repeat-containing protein 44 [Helianthus annuus]
 gb|OTG07259.1| putative transducin/WD40 repeat-like superfamily protein
           [Helianthus annuus]
          Length = 896

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -1

Query: 489 SSATNGYSFDRMSATWPEEKLVSAAAKNRSCRTSVALLD*MSPG 358
           SSATNGY FDR+SAT+PEEKLV  + KNRS RTSV   + ++ G
Sbjct: 824 SSATNGYFFDRISATFPEEKLVMGSTKNRSPRTSVDFSNGLNAG 867


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