BLASTX nr result

ID: Chrysanthemum21_contig00030605 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030605
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021969236.1| WD repeat-containing protein 44-like [Helian...    89   3e-18
gb|KVH95270.1| G-protein beta WD-40 repeat-containing protein [C...    86   5e-17
ref|XP_023745633.1| WD repeat-containing protein 44-like isoform...    82   1e-15
ref|XP_023745632.1| WD repeat-containing protein 44-like isoform...    82   1e-15
ref|XP_022025725.1| uncharacterized WD repeat-containing protein...    80   4e-15
ref|XP_023766050.1| uncharacterized protein LOC111914569 [Lactuc...    66   2e-10
ref|XP_023742372.1| WD repeat-containing protein 44-like [Lactuc...    64   2e-09
gb|KVH91778.1| hypothetical protein Ccrd_006198 [Cynara carduncu...    64   3e-09
gb|OTG32118.1| putative transducin/WD40 repeat-like superfamily ...    54   7e-06
ref|XP_022029155.1| uncharacterized WD repeat-containing protein...    54   7e-06

>ref|XP_021969236.1| WD repeat-containing protein 44-like [Helianthus annuus]
 ref|XP_021969238.1| WD repeat-containing protein 44-like [Helianthus annuus]
 ref|XP_021969239.1| WD repeat-containing protein 44-like [Helianthus annuus]
 gb|OTG21992.1| putative dynein regulator LIS1 [Helianthus annuus]
          Length = 699

 Score = 89.4 bits (220), Expect = 3e-18
 Identities = 58/121 (47%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
 Frame = -2

Query: 338 MGSY---KEDVFFDAYEFFDDMFDS------EDCSTSGFGYDYWGVGDMESVGFRRNKLL 186
           MGSY   +ED FFDA E FD M DS      EDCSTSGFGYDYW VG+++ V  RR+KLL
Sbjct: 1   MGSYSEDEEDEFFDAREVFDYMSDSGSDWLPEDCSTSGFGYDYW-VGNLDGVDARRDKLL 59

Query: 185 RFMGLSSRWLXXXXXXXXXXXXXXXXXXXXXEIREDSNVVLDGKIGDASLGLSRQPSLSD 6
           R MGLSSRW                      EIR+   VV    +      L RQPSL+D
Sbjct: 60  RLMGLSSRW---RVNRDNEEGYDPYEDGFIDEIRDSGEVVSRENLNTQDEVLCRQPSLTD 116

Query: 5   W 3
           W
Sbjct: 117 W 117


>gb|KVH95270.1| G-protein beta WD-40 repeat-containing protein [Cynara cardunculus
           var. scolymus]
          Length = 708

 Score = 85.9 bits (211), Expect = 5e-17
 Identities = 57/114 (50%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
 Frame = -2

Query: 326 KEDVFFDAYEFFDDMFDS------EDCSTSGFGYDYWGVGDMESVGFRRNKLLRFMGLSS 165
           +ED FFDA E F  M DS      EDCSTSGFGYDYW VG+++SV  RR+KLLRFMGL+S
Sbjct: 8   QEDDFFDAREVFASMSDSGSDCSPEDCSTSGFGYDYW-VGNLDSVDIRRDKLLRFMGLNS 66

Query: 164 RWLXXXXXXXXXXXXXXXXXXXXXEIREDSNVVLDGKIGDASLGLSRQPSLSDW 3
           RWL                     EIRED+ +V   K       L RQPSL DW
Sbjct: 67  RWL-------VRDPEEEYEDDFVDEIREDTMLV---KSDFQDGFLYRQPSLCDW 110


>ref|XP_023745633.1| WD repeat-containing protein 44-like isoform X2 [Lactuca sativa]
 gb|PLY64866.1| hypothetical protein LSAT_3X12220 [Lactuca sativa]
          Length = 712

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 56/120 (46%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
 Frame = -2

Query: 338 MGSYK--EDVFFDAYEFFDDMFDS------EDCSTSGFGYDYWGVGDMESVGFRRNKLLR 183
           MGSY   ED FFDA E F  M DS      EDCSTSGF YDYW VG+ME V  RR+K LR
Sbjct: 1   MGSYSDNEDEFFDAREAFASMSDSGSDCSPEDCSTSGFDYDYW-VGNMEGVDSRRDKFLR 59

Query: 182 FMGLSSRWLXXXXXXXXXXXXXXXXXXXXXEIREDSNVVLDGKIGDASLGLSRQPSLSDW 3
           FMGL+S+WL                     EI ED+ ++           L RQPSLS W
Sbjct: 60  FMGLNSKWL------VNREGEEEYDNDFIDEINEDTVLISPQNSDFQDRILCRQPSLSIW 113


>ref|XP_023745632.1| WD repeat-containing protein 44-like isoform X1 [Lactuca sativa]
          Length = 719

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 56/120 (46%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
 Frame = -2

Query: 338 MGSYK--EDVFFDAYEFFDDMFDS------EDCSTSGFGYDYWGVGDMESVGFRRNKLLR 183
           MGSY   ED FFDA E F  M DS      EDCSTSGF YDYW VG+ME V  RR+K LR
Sbjct: 8   MGSYSDNEDEFFDAREAFASMSDSGSDCSPEDCSTSGFDYDYW-VGNMEGVDSRRDKFLR 66

Query: 182 FMGLSSRWLXXXXXXXXXXXXXXXXXXXXXEIREDSNVVLDGKIGDASLGLSRQPSLSDW 3
           FMGL+S+WL                     EI ED+ ++           L RQPSLS W
Sbjct: 67  FMGLNSKWL------VNREGEEEYDNDFIDEINEDTVLISPQNSDFQDRILCRQPSLSIW 120


>ref|XP_022025725.1| uncharacterized WD repeat-containing protein C18H10.05-like
           [Helianthus annuus]
 gb|OTF84927.1| putative transducin/WD40 repeat-like superfamily protein
           [Helianthus annuus]
          Length = 695

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 51/114 (44%), Positives = 62/114 (54%), Gaps = 6/114 (5%)
 Frame = -2

Query: 326 KEDVFFDAYEFFDDMFDS------EDCSTSGFGYDYWGVGDMESVGFRRNKLLRFMGLSS 165
           +ED FFDA E FD M DS      EDCSTSGFGY YW VG+++SV  RR+KLLRFMGL+S
Sbjct: 8   EEDEFFDAREVFDLMSDSDSDCSPEDCSTSGFGYGYW-VGNLDSVDARRDKLLRFMGLNS 66

Query: 164 RWLXXXXXXXXXXXXXXXXXXXXXEIREDSNVVLDGKIGDASLGLSRQPSLSDW 3
           RWL                     E+R+   V+L   +      L R  S+ DW
Sbjct: 67  RWL------VNRDREEEYEDVFVDEVRDKIEVILPENLRSRDEFLFRNKSVIDW 114


>ref|XP_023766050.1| uncharacterized protein LOC111914569 [Lactuca sativa]
          Length = 293

 Score = 66.2 bits (160), Expect = 2e-10
 Identities = 38/69 (55%), Positives = 45/69 (65%), Gaps = 8/69 (11%)
 Frame = -2

Query: 338 MGSYK--EDVFFDAYEFFDDMFDS------EDCSTSGFGYDYWGVGDMESVGFRRNKLLR 183
           MGSY   ED FFDA E F  M DS      +DCST+ F YDYW VG++E V  R +K LR
Sbjct: 1   MGSYSDNEDEFFDAREAFASMSDSGSDCSPKDCSTTVFDYDYW-VGNLEGVESRCDKFLR 59

Query: 182 FMGLSSRWL 156
            MGL+S+WL
Sbjct: 60  LMGLNSKWL 68


>ref|XP_023742372.1| WD repeat-containing protein 44-like [Lactuca sativa]
 ref|XP_023742373.1| WD repeat-containing protein 44-like [Lactuca sativa]
 gb|PLY67242.1| hypothetical protein LSAT_6X82540 [Lactuca sativa]
          Length = 669

 Score = 64.3 bits (155), Expect = 2e-09
 Identities = 45/114 (39%), Positives = 56/114 (49%), Gaps = 7/114 (6%)
 Frame = -2

Query: 323 EDVFFDAYEFFDDMFDSE------DCSTSGFGYDYWGVGDMESVGFRRNKLLRFMGLSSR 162
           ED FFDA E F  M DS+      DC TSG+ YD W +G+++SV  RRNK +R +GLSS+
Sbjct: 10  EDDFFDAREVFVSMSDSDSERYSDDCCTSGYKYDSW-IGNLDSVDERRNKFIRSIGLSSK 68

Query: 161 WLXXXXXXXXXXXXXXXXXXXXXEIREDSNVVLDGKIGD-ASLGLSRQPSLSDW 3
           WL                        E+     D +I D     L RQPSLS W
Sbjct: 69  WLVRDEESDETSDEK----------TENPKPAADQQIPDLEDAFLIRQPSLSIW 112


>gb|KVH91778.1| hypothetical protein Ccrd_006198 [Cynara cardunculus var. scolymus]
          Length = 632

 Score = 63.5 bits (153), Expect = 3e-09
 Identities = 35/63 (55%), Positives = 43/63 (68%), Gaps = 4/63 (6%)
 Frame = -2

Query: 332 SYKEDVFFDAYEFFDDMFDS----EDCSTSGFGYDYWGVGDMESVGFRRNKLLRFMGLSS 165
           S  ED F DA+E F    DS    +DCSTSGFGYD W VG+++SV  RRN+ +R MGLSS
Sbjct: 5   SETEDEFLDAHEVFVSSSDSGSECDDCSTSGFGYDSW-VGNLDSVDERRNRFMRSMGLSS 63

Query: 164 RWL 156
           + L
Sbjct: 64  KRL 66


>gb|OTG32118.1| putative transducin/WD40 repeat-like superfamily protein
           [Helianthus annuus]
          Length = 690

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
 Frame = -2

Query: 335 GSYKEDVFFDAYEFFDDMFDSE------DCSTSGFG--YDYWGVGDMESVGFRRNKLLRF 180
           GS  ED FFDA E F  + DS+      +CSTS  G  YD W +G+ +SV  RRN+ +R 
Sbjct: 4   GSDIEDDFFDAREMFAVLSDSDTERSSDECSTSASGLKYDDW-MGNFDSVNERRNRFIRS 62

Query: 179 MGLSSRWL 156
           +GLSS+W+
Sbjct: 63  VGLSSKWV 70


>ref|XP_022029155.1| uncharacterized WD repeat-containing protein C3H5.08c-like
           [Helianthus annuus]
          Length = 692

 Score = 53.9 bits (128), Expect = 7e-06
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 8/68 (11%)
 Frame = -2

Query: 335 GSYKEDVFFDAYEFFDDMFDSE------DCSTSGFG--YDYWGVGDMESVGFRRNKLLRF 180
           GS  ED FFDA E F  + DS+      +CSTS  G  YD W +G+ +SV  RRN+ +R 
Sbjct: 6   GSDIEDDFFDAREMFAVLSDSDTERSSDECSTSASGLKYDDW-MGNFDSVNERRNRFIRS 64

Query: 179 MGLSSRWL 156
           +GLSS+W+
Sbjct: 65  VGLSSKWV 72


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