BLASTX nr result

ID: Chrysanthemum21_contig00030541 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030541
         (643 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007694696.1| hypothetical protein COCSADRAFT_209102 [Bipo...   100   6e-23
ref|XP_014084687.1| hypothetical protein COCC4DRAFT_55440 [Bipol...    57   5e-07

>ref|XP_007694696.1| hypothetical protein COCSADRAFT_209102 [Bipolaris sorokiniana
           ND90Pr]
 gb|EMD69345.1| hypothetical protein COCSADRAFT_209102 [Bipolaris sorokiniana
           ND90Pr]
          Length = 150

 Score = 99.8 bits (247), Expect = 6e-23
 Identities = 62/120 (51%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
 Frame = +3

Query: 255 SAFACVGVSI----LYIFLSTLQLCKFSLCLFVLCHCSLLRAACWIDIPSSLQVXXXXXX 422
           S  ACVGV      L+ F  T  +C  SLCLFVLCHCSLLRAA WIDIPSS  +      
Sbjct: 5   SPLACVGVFDFTFWLFFFQHTQPIC-ISLCLFVLCHCSLLRAARWIDIPSSRSLTVKLCR 63

Query: 423 XXXXXXXXXRLPATRDAVCVCL*MSFHQMMRSVYISLSMSVPEVPYARSSPARPGTLHFP 602
                    + P        CL +SFHQMMR V+ISLSMSVPEVPYAR S  +P    FP
Sbjct: 64  QLSLRQTYVQSPCLLRLHVRCLQISFHQMMRFVHISLSMSVPEVPYARFS-VQPSYFLFP 122


>ref|XP_014084687.1| hypothetical protein COCC4DRAFT_55440 [Bipolaris maydis ATCC 48331]
 gb|EMD95919.1| hypothetical protein COCHEDRAFT_1152010 [Bipolaris maydis C5]
 gb|ENI10778.1| hypothetical protein COCC4DRAFT_55440 [Bipolaris maydis ATCC 48331]
          Length = 116

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 32/77 (41%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
 Frame = +3

Query: 255 SAFACVGV---SILYIFLSTLQLCKFSLCLFVLCHCSLLRAACWIDIPSSLQVXXXXXXX 425
           S  ACVGV   +  + F    Q    SLCLFVLCHCSLLR A WIDIPS   +       
Sbjct: 5   SPLACVGVFDFTFWFFFFQYTQPTCISLCLFVLCHCSLLRVARWIDIPSLRSLTAKLCRR 64

Query: 426 XXXXXXXXRLPATRDAV 476
                   + P +RD +
Sbjct: 65  LSLRQTCVQSPPSRDCI 81


Top