BLASTX nr result

ID: Chrysanthemum21_contig00030417 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030417
         (424 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023728914.1| leucine-rich repeat extensin-like protein 1 ...    59   1e-09
ref|XP_021995279.1| classical arabinogalactan protein 9-like [He...    56   5e-07

>ref|XP_023728914.1| leucine-rich repeat extensin-like protein 1 [Lactuca sativa]
 gb|PLY77651.1| hypothetical protein LSAT_5X77500 [Lactuca sativa]
          Length = 169

 Score = 59.3 bits (142), Expect(2) = 1e-09
 Identities = 32/62 (51%), Positives = 36/62 (58%)
 Frame = -1

Query: 364 VMFKPARSPSSVHRALNLSRFYYFDSPISKFLHMTKSYPPPAYISKGGNKGGLSRLRLMY 185
           V  +P  SPS V  A    RFYYFDSP+S    +TKS PPPAY S GG K      R +Y
Sbjct: 61  VASRPPPSPSLVQHAPPPPRFYYFDSPLSIAPPLTKSTPPPAYTSVGGKKTSPPPPRFVY 120

Query: 184 FP 179
           FP
Sbjct: 121 FP 122



 Score = 31.2 bits (69), Expect(2) = 1e-09
 Identities = 16/38 (42%), Positives = 21/38 (55%)
 Frame = -3

Query: 131 GTNNYPYLYDIFDPQAASFSYIGIVCTLMLSVCFHVTL 18
           G  +YPY Y ++D +A S   +G    L L V  HVTL
Sbjct: 129 GQTSYPYPYYVYDSKACSLC-VGFFWVLWLLVVVHVTL 165


>ref|XP_021995279.1| classical arabinogalactan protein 9-like [Helianthus annuus]
          Length = 161

 Score = 56.2 bits (134), Expect = 5e-07
 Identities = 31/61 (50%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
 Frame = -1

Query: 355 KPARSPSSVHRALNLSRFYYFDSPISKFLHMTKSYPPPAYIS--KGGNKGGLSRLRLMYF 182
           KP  SP+  H      RFYYFDSP S       SYPPPAYI+   GG  GG    RL+YF
Sbjct: 68  KPPPSPTPAHHTPPPPRFYYFDSPESLAPPAVTSYPPPAYITLGGGGGGGGPPSPRLVYF 127

Query: 181 P 179
           P
Sbjct: 128 P 128


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