BLASTX nr result

ID: Chrysanthemum21_contig00030303 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030303
         (448 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021969944.1| chromatin remodeling protein EBS isoform X2 ...    59   1e-07
ref|XP_023749122.1| chromatin remodeling protein EBS [Lactuca sa...    57   9e-07

>ref|XP_021969944.1| chromatin remodeling protein EBS isoform X2 [Helianthus annuus]
 gb|OTG36339.1| putative bromo adjacent homology (BAH) domain, Zinc finger,
           RING/FYVE/PHD-type [Helianthus annuus]
          Length = 220

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +1

Query: 1   CKERYHPACINMTDDEAKQIDSFTCDECRSLD 96
           CK+ YHPAC+NMT ++ KQ+DSFTCDEC SLD
Sbjct: 159 CKDWYHPACLNMTVEQTKQLDSFTCDECSSLD 190


>ref|XP_023749122.1| chromatin remodeling protein EBS [Lactuca sativa]
          Length = 215

 Score = 56.6 bits (135), Expect = 9e-07
 Identities = 25/44 (56%), Positives = 33/44 (75%), Gaps = 4/44 (9%)
 Frame = +1

Query: 1   CKERYHPACINMTDDEAKQIDSFTCDECRSLDV----NQASSSA 120
           CK+ YHP C+NMT ++AKQ+DSFTC +C S DV    N+ SSS+
Sbjct: 159 CKDWYHPTCLNMTTEQAKQLDSFTCSDCSSEDVKRPPNRNSSSS 202


Top