BLASTX nr result

ID: Chrysanthemum21_contig00030269 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030269
         (379 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OTF92762.1| putative F-box domain-containing protein [Heliant...    78   3e-14
ref|XP_022018171.1| F-box protein At5g07610-like [Helianthus ann...    78   3e-14
gb|KVH97376.1| F-box domain, cyclin-like protein [Cynara cardunc...    74   9e-13

>gb|OTF92762.1| putative F-box domain-containing protein [Helianthus annuus]
          Length = 355

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
 Frame = -2

Query: 345 FEGLGVGTYCNDAIHWINHDVNGALHYKLDFVNKTVLTKIQLPVTMDTVDNYC--KLSKS 172
           F G   G Y NDAIHW+ H+ N ALH +LD  +K  LT I  P  +D  + +C  +L +S
Sbjct: 196 FRGFHQGIYWNDAIHWL-HNANRALHCRLDVEHKC-LTSINTPKILDGKEVHCDQRLFES 253

Query: 171 RGCLLLLGMDKTHSHDQLNVYEMGNGDSEWFLKYSVN--QWGISLGGVW----------- 31
            GCLLLL +D      ++++YEM  GDS W +KY VN  ++ + L   W           
Sbjct: 254 HGCLLLLCIDL----QRMSIYEMREGDSGWSVKYIVNLVEFMMLLPKTWRKGLRCLCSNH 309

Query: 30  --FIALGEREED 1
              I +G+REED
Sbjct: 310 VRCIMIGKREED 321


>ref|XP_022018171.1| F-box protein At5g07610-like [Helianthus annuus]
          Length = 366

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 17/132 (12%)
 Frame = -2

Query: 345 FEGLGVGTYCNDAIHWINHDVNGALHYKLDFVNKTVLTKIQLPVTMDTVDNYC--KLSKS 172
           F G   G Y NDAIHW+ H+ N ALH +LD  +K  LT I  P  +D  + +C  +L +S
Sbjct: 196 FRGFHQGIYWNDAIHWL-HNANRALHCRLDVEHKC-LTSINTPKILDGKEVHCDQRLFES 253

Query: 171 RGCLLLLGMDKTHSHDQLNVYEMGNGDSEWFLKYSVN--QWGISLGGVW----------- 31
            GCLLLL +D      ++++YEM  GDS W +KY VN  ++ + L   W           
Sbjct: 254 HGCLLLLCIDL----QRMSIYEMREGDSGWSVKYIVNLVEFMMLLPKTWRKGLRCLCSNH 309

Query: 30  --FIALGEREED 1
              I +G+REED
Sbjct: 310 VRCIMIGKREED 321


>gb|KVH97376.1| F-box domain, cyclin-like protein [Cynara cardunculus var.
           scolymus]
          Length = 365

 Score = 73.6 bits (179), Expect = 9e-13
 Identities = 54/131 (41%), Positives = 69/131 (52%), Gaps = 15/131 (11%)
 Frame = -2

Query: 348 PFEGLGVGTYCNDAIHWINHDVNGALHYKLDFVNKTVLTKIQLPVTMDTVDNYC-KLSKS 172
           P  G   G Y N+AIHW++  VNG LH+KLD +   +LT++Q P T+D   +Y  KL +S
Sbjct: 117 PDAGFHHGIYWNNAIHWLDF-VNGGLHFKLD-IEHPLLTRVQTPGTLDRKLHYVHKLLES 174

Query: 171 RGCLLLLGMDKTHSHDQLNVYEMGNGDSEWFLKYSVN--QWGISLGGVWFIA-------- 22
           RG LLL+         QL VYEM N  S W +KY VN    G      W I+        
Sbjct: 175 RGRLLLVY--PVLDSRQLKVYEMRNEYSGWLVKYIVNLDDMGKLFPKTWLISAKRFCIIV 232

Query: 21  ----LGEREED 1
               +GEREED
Sbjct: 233 RSVVVGEREED 243


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