BLASTX nr result

ID: Chrysanthemum21_contig00030232 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030232
         (394 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH97984.1| TATA element modulatory factor 1 DNA binding, par...   139   2e-35
ref|XP_023760701.1| golgin candidate 5-like isoform X2 [Lactuca ...   102   2e-22
ref|XP_023760693.1| golgin candidate 5-like isoform X1 [Lactuca ...   102   2e-22
ref|XP_022033655.1| golgin candidate 5-like [Helianthus annuus] ...    86   7e-17
gb|KVI05987.1| TATA element modulatory factor 1 TATA binding [Cy...    84   3e-16
gb|PLY96946.1| hypothetical protein LSAT_4X102580 [Lactuca sativa]     59   2e-07
ref|XP_023738966.1| golgin candidate 5-like [Lactuca sativa]           59   3e-07
ref|XP_023761863.1| golgin candidate 5-like [Lactuca sativa] >gi...    57   7e-07

>gb|KVH97984.1| TATA element modulatory factor 1 DNA binding, partial [Cynara
           cardunculus var. scolymus]
          Length = 792

 Score =  139 bits (349), Expect = 2e-35
 Identities = 82/136 (60%), Positives = 94/136 (69%), Gaps = 6/136 (4%)
 Frame = -1

Query: 394 ESSADHADQSESVDHVPSSDNSEF------VPIQEESANTVGQGVGTSELNEVHHAPDLQ 233
           E SADHA+QSE V  V S D+SE         IQ+ES N   Q V TSELNEVH APDL 
Sbjct: 225 ELSADHAEQSEFVVRVLSRDSSEVGSSKKSESIQDESTNLSDQVVVTSELNEVHPAPDLP 284

Query: 232 KDEDELKTQSEETSHEVSAIEVLEPSYDSQAGNTTELDDVQSVTLEAAKTAAEGQPHSLE 53
           KDED LK Q EE S EVSA+EV++PSYD Q G  TEL++VQSV  E  K A EGQ HSL+
Sbjct: 285 KDEDGLKIQLEEASQEVSAVEVVKPSYDGQDGIVTELNEVQSVIHETTKVAEEGQLHSLQ 344

Query: 52  SSGDVSAMVLEVVSQE 5
           SS DVS++V EVV +E
Sbjct: 345 SSDDVSSVVPEVVPKE 360


>ref|XP_023760701.1| golgin candidate 5-like isoform X2 [Lactuca sativa]
          Length = 961

 Score =  102 bits (253), Expect = 2e-22
 Identities = 65/123 (52%), Positives = 80/123 (65%), Gaps = 7/123 (5%)
 Frame = -1

Query: 349 VPSSDNSEFVP------IQEESANTVGQGVGTSELNEVHHAPDLQKDEDELKTQSEETSH 188
           V S D+SE  P      IQ+ES +   Q V  SELNEVH APDLQKD+D  KT+S +TS 
Sbjct: 204 VLSRDSSEAGPLEKSESIQDESTSFSDQVVIASELNEVHSAPDLQKDDDGPKTESADTSQ 263

Query: 187 EVSAIEVLEPSYDSQAGNTTELDDVQSVTLEAAKTAAEGQPHSLESSGDVSA-MVLEVVS 11
           EVSA+EV++P YD Q G         S TLE  + A EGQ HSL+SS DV+A +V EVVS
Sbjct: 264 EVSAVEVVKPLYDGQTG---------SETLETTEVAEEGQLHSLQSSDDVAAVLVPEVVS 314

Query: 10  QEE 2
           +E+
Sbjct: 315 KED 317


>ref|XP_023760693.1| golgin candidate 5-like isoform X1 [Lactuca sativa]
 gb|PLY98619.1| hypothetical protein LSAT_1X35300 [Lactuca sativa]
          Length = 963

 Score =  102 bits (253), Expect = 2e-22
 Identities = 65/123 (52%), Positives = 80/123 (65%), Gaps = 7/123 (5%)
 Frame = -1

Query: 349 VPSSDNSEFVP------IQEESANTVGQGVGTSELNEVHHAPDLQKDEDELKTQSEETSH 188
           V S D+SE  P      IQ+ES +   Q V  SELNEVH APDLQKD+D  KT+S +TS 
Sbjct: 206 VLSRDSSEAGPLEKSESIQDESTSFSDQVVIASELNEVHSAPDLQKDDDGPKTESADTSQ 265

Query: 187 EVSAIEVLEPSYDSQAGNTTELDDVQSVTLEAAKTAAEGQPHSLESSGDVSA-MVLEVVS 11
           EVSA+EV++P YD Q G         S TLE  + A EGQ HSL+SS DV+A +V EVVS
Sbjct: 266 EVSAVEVVKPLYDGQTG---------SETLETTEVAEEGQLHSLQSSDDVAAVLVPEVVS 316

Query: 10  QEE 2
           +E+
Sbjct: 317 KED 319


>ref|XP_022033655.1| golgin candidate 5-like [Helianthus annuus]
 gb|OTG27081.1| putative golgin candidate 5 [Helianthus annuus]
          Length = 975

 Score = 85.9 bits (211), Expect = 7e-17
 Identities = 59/137 (43%), Positives = 84/137 (61%), Gaps = 7/137 (5%)
 Frame = -1

Query: 391 SSADHADQSE-SVDHVPSSDNSEFV----PIQEESANTVGQGVGTSELNEVHHAPDLQKD 227
           ++A+   Q+E +VD V   + SEFV     I +ES + V Q V  SELNEVH  PDL+  
Sbjct: 221 TAAEVDSQAELNVDRV---ELSEFVGKSESIVDESTDGVDQVVAASELNEVHPTPDLK-- 275

Query: 226 EDELKTQSEETSHE--VSAIEVLEPSYDSQAGNTTELDDVQSVTLEAAKTAAEGQPHSLE 53
                  SEE SHE  VSA+EV +PS D + G+ +E+++ QSVTLE  K A EGQ H  +
Sbjct: 276 -------SEEASHEESVSAVEVEKPSVDGETGSLSEINEGQSVTLEEIKVAEEGQLHLSQ 328

Query: 52  SSGDVSAMVLEVVSQEE 2
           +  DVS ++ E +S+++
Sbjct: 329 NPDDVSVIISEALSKKD 345


>gb|KVI05987.1| TATA element modulatory factor 1 TATA binding [Cynara cardunculus
           var. scolymus]
          Length = 1100

 Score = 84.3 bits (207), Expect = 3e-16
 Identities = 52/132 (39%), Positives = 78/132 (59%), Gaps = 4/132 (3%)
 Frame = -1

Query: 388 SADHADQSESVDHVPSSDNSE---FVPIQEESANTVGQGVGTS-ELNEVHHAPDLQKDED 221
           SAD A++S+ +    +S+      +  +++ES N+V Q   TS ELNE + APD+QK + 
Sbjct: 330 SADDAEESKFLGREENSEIDSVKNYGSVEDESTNSVDQVSTTSPELNEKNAAPDMQKSDH 389

Query: 220 ELKTQSEETSHEVSAIEVLEPSYDSQAGNTTELDDVQSVTLEAAKTAAEGQPHSLESSGD 41
           EL  Q + T+ E SA+E ++ SY+ Q+ N +E    Q    E  ++  E QPH L SS D
Sbjct: 390 ELNMQDKMTTQEDSAVEAVDSSYEDQSANESEPLGPQYPVSEVDESVEECQPHLLPSSDD 449

Query: 40  VSAMVLEVVSQE 5
            S MVLEV S++
Sbjct: 450 ASKMVLEVASKD 461


>gb|PLY96946.1| hypothetical protein LSAT_4X102580 [Lactuca sativa]
          Length = 409

 Score = 58.5 bits (140), Expect = 2e-07
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
 Frame = -1

Query: 391 SSADHADQSESVDHVPSSDNSEFVPIQEESANTVGQGVGTSELNEVHH-APDLQKDEDEL 215
           S+ D  DQS+S++HV  S++SE      ++  ++ Q   T  ++EV   +PDLQK + EL
Sbjct: 172 STNDAEDQSDSLEHVQDSESSEIG--STKNLGSIDQL--TDSVDEVQTISPDLQKSDHEL 227

Query: 214 KTQSEETSHEVSAIEVLEPSYDSQAGNTTELDDVQSVTLEAAKTAAEGQPHSLESSGDVS 35
             Q+  T+ E   +E ++ +YD Q+        ++S   E  KT  +GQPH L    + S
Sbjct: 228 NVQNTVTTQEDDLVEGVDATYDGQSA-------IESEPHEMIKTVQKGQPHLLPK--NAS 278

Query: 34  AMVLEVVSQE 5
             V EVV ++
Sbjct: 279 EKVPEVVPKD 288


>ref|XP_023738966.1| golgin candidate 5-like [Lactuca sativa]
          Length = 939

 Score = 58.5 bits (140), Expect = 3e-07
 Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 1/130 (0%)
 Frame = -1

Query: 391 SSADHADQSESVDHVPSSDNSEFVPIQEESANTVGQGVGTSELNEVHH-APDLQKDEDEL 215
           S+ D  DQS+S++HV  S++SE      ++  ++ Q   T  ++EV   +PDLQK + EL
Sbjct: 172 STNDAEDQSDSLEHVQDSESSEIG--STKNLGSIDQL--TDSVDEVQTISPDLQKSDHEL 227

Query: 214 KTQSEETSHEVSAIEVLEPSYDSQAGNTTELDDVQSVTLEAAKTAAEGQPHSLESSGDVS 35
             Q+  T+ E   +E ++ +YD Q+        ++S   E  KT  +GQPH L    + S
Sbjct: 228 NVQNTVTTQEDDLVEGVDATYDGQSA-------IESEPHEMIKTVQKGQPHLLPK--NAS 278

Query: 34  AMVLEVVSQE 5
             V EVV ++
Sbjct: 279 EKVPEVVPKD 288


>ref|XP_023761863.1| golgin candidate 5-like [Lactuca sativa]
 gb|PLY86902.1| hypothetical protein LSAT_5X130960 [Lactuca sativa]
          Length = 886

 Score = 57.4 bits (137), Expect = 7e-07
 Identities = 46/128 (35%), Positives = 63/128 (49%), Gaps = 5/128 (3%)
 Frame = -1

Query: 373 DQSESVDHVPSSDNSEFVPIQEESANTVGQGVGTS-ELNEVHHAPDLQKDEDELKTQSEE 197
           D+SE+ D + +    + V    ES N+  Q  GTS E NEV+   DLQK EDE+KTQ EE
Sbjct: 155 DESETSDKLEAEAGVDHVD-HAESTNSEDQVAGTSLESNEVNIVLDLQKTEDEVKTQEEE 213

Query: 196 TSHEVSAIEVLEPSYDSQAGNTTELDDVQSVTLEAAKTA----AEGQPHSLESSGDVSAM 29
           +  EVS         D Q GN T   + QS + + A       A  +   +  S + S +
Sbjct: 214 SIGEVS---------DGQTGNGTRQHEAQSASSDVASIQVSDDAIKEQEMISGSNEDSVV 264

Query: 28  VLEVVSQE 5
            LE V +E
Sbjct: 265 ELEKVKRE 272


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