BLASTX nr result

ID: Chrysanthemum21_contig00030110 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00030110
         (483 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY92737.1| hypothetical protein LSAT_8X47361 [Lactuca sativa]      62   6e-08
ref|XP_023754224.1| TMV resistance protein N-like [Lactuca sativa]     62   6e-08

>gb|PLY92737.1| hypothetical protein LSAT_8X47361 [Lactuca sativa]
          Length = 1085

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
 Frame = +1

Query: 22   YKELRKWVGYVPFDSLRHTLWWDQSLTAHAVSFSIDFNDAYFDDDTYYPNKKNEETKERC 201
            Y+E + +VGYV F SLRHT WW+ S   + +SFSID   +               +    
Sbjct: 966  YRETKTYVGYVSFSSLRHTTWWNSS--CNKISFSIDMGCS---------------SASAQ 1008

Query: 202  SGFGVKLVPR--LSHIGSRKDSSQLFDEKYDSRCTYGIQYDSNTDLQLNF 345
            S FGV+LVPR        + D S+ +D++ +   T+ IQ+DS + +++++
Sbjct: 1009 SNFGVELVPRKIKGDEVQKTDCSEFWDKELEDETTFMIQHDSPSSIKISW 1058


>ref|XP_023754224.1| TMV resistance protein N-like [Lactuca sativa]
          Length = 1097

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 36/110 (32%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
 Frame = +1

Query: 22   YKELRKWVGYVPFDSLRHTLWWDQSLTAHAVSFSIDFNDAYFDDDTYYPNKKNEETKERC 201
            Y+E + +VGYV F SLRHT WW+ S   + +SFSID   +               +    
Sbjct: 966  YRETKTYVGYVSFSSLRHTTWWNSS--CNKISFSIDMGCS---------------SASAQ 1008

Query: 202  SGFGVKLVPR--LSHIGSRKDSSQLFDEKYDSRCTYGIQYDSNTDLQLNF 345
            S FGV+LVPR        + D S+ +D++ +   T+ IQ+DS + +++++
Sbjct: 1009 SNFGVELVPRKIKGDEVQKTDCSEFWDKELEDETTFMIQHDSPSSIKISW 1058


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