BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00029970
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023761456.1| RNA polymerase sigma factor sigE, chloroplas...    58   4e-07

>ref|XP_023761456.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Lactuca sativa]
 ref|XP_023761457.1| RNA polymerase sigma factor sigE, chloroplastic/mitochondrial
           [Lactuca sativa]
 gb|PLY87284.1| hypothetical protein LSAT_4X164620 [Lactuca sativa]
          Length = 515

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 30/64 (46%), Positives = 41/64 (64%)
 Frame = +2

Query: 14  LEREPTDGELAAATNMNVSQVRKQIVLGQAETN*LMRDKKGNLIDFWIRHWNVAIKAATF 193
           LEREPTDGELA ATNMNVSQ+RKQI +GQA  N L++     ++    +++        F
Sbjct: 247 LEREPTDGELAEATNMNVSQLRKQIGIGQAARNKLIKHNLRLVLFVMNKYFQEFANGRNF 306

Query: 194 KNIC 205
           ++ C
Sbjct: 307 QDFC 310