BLASTX nr result

ID: Chrysanthemum21_contig00029006 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00029006
         (639 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022020539.1| mediator of RNA polymerase II transcription ...    60   9e-07

>ref|XP_022020539.1| mediator of RNA polymerase II transcription subunit 23-like
            [Helianthus annuus]
 gb|OTF87867.1| putative mediator complex, subunit Med23 [Helianthus annuus]
          Length = 1550

 Score = 59.7 bits (143), Expect = 9e-07
 Identities = 28/39 (71%), Positives = 33/39 (84%)
 Frame = +1

Query: 10   YAEASRVIEDNKLNSAVGFALLDPTWAAQENTSTTLGFV 126
            Y EASRVI+DN+ +S V +ALLDPTWAAQ+NTST LG V
Sbjct: 1356 YEEASRVIKDNESHSVVAYALLDPTWAAQDNTSTALGNV 1394


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