BLASTX nr result

ID: Chrysanthemum21_contig00028890 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00028890
         (559 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PON91042.1| HAT (Half-A-TPR) repeat [Trema orientalis]              54   6e-06

>gb|PON91042.1| HAT (Half-A-TPR) repeat [Trema orientalis]
          Length = 156

 Score = 54.3 bits (129), Expect = 6e-06
 Identities = 25/49 (51%), Positives = 32/49 (65%)
 Frame = -1

Query: 559 NTFRYPTSRCYINFMRKANDNKGPAVQEESMQTYDLMPDYVGMSIYQLF 413
           N F+ P  RCYI F+RKAND KG   QEE+ + +D M  YVG+S +  F
Sbjct: 91  NCFQVPLWRCYIRFIRKANDKKGLDGQEETKKAFDFMLSYVGVSYHSSF 139


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