BLASTX nr result

ID: Chrysanthemum21_contig00028816 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00028816
         (447 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023745857.1| RING-H2 finger protein ATL54-like [Lactuca s...    90   9e-19
ref|XP_023764742.1| RING-H2 finger protein ATL54-like [Lactuca s...    90   2e-18
ref|XP_021993280.1| RING-H2 finger protein ATL54-like [Helianthu...    84   1e-16
gb|KVH93400.1| Non-heme dioxygenase N-terminal domain-containing...    82   3e-15
gb|KVI10915.1| Zinc finger, RING/FYVE/PHD-type [Cynara carduncul...    74   8e-13
ref|XP_021988188.1| RING-H2 finger protein ATL54-like [Helianthu...    65   2e-09

>ref|XP_023745857.1| RING-H2 finger protein ATL54-like [Lactuca sativa]
 gb|PLY64653.1| hypothetical protein LSAT_7X82160 [Lactuca sativa]
          Length = 303

 Score = 90.1 bits (222), Expect = 9e-19
 Identities = 52/132 (39%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
 Frame = +2

Query: 50  MAAHDRHRKLLEDLTNTTSIYIKFCFSQCDPKANPSGLCFAECLPFCPSFCHVGGXXXXX 229
           MA  +RHR+L+ D T      I FC  QCD + NPSG+CF  C   CPSFC +       
Sbjct: 1   MAPSNRHRRLMVDST------ISFCNLQCDLERNPSGICFPFCAATCPSFCRIADYSPPP 54

Query: 230 XXXXXXXXXXXXXXGDP---NSPLSLPLKISLVFIVSSFIYTIYKFY-IWHKSRRPRVP- 394
                           P   +  +S PLK+SL+F++ +FIYT+YKFY + ++S+  R P 
Sbjct: 55  SSSPSPANSPYSQPAPPAPNHLKISFPLKLSLLFLIGTFIYTLYKFYTVSYRSKSHRTPP 114

Query: 395 --LRENQETRDQ 424
               ENQET DQ
Sbjct: 115 PVSPENQETLDQ 126


>ref|XP_023764742.1| RING-H2 finger protein ATL54-like [Lactuca sativa]
 gb|PLY84716.1| hypothetical protein LSAT_5X108880 [Lactuca sativa]
          Length = 353

 Score = 89.7 bits (221), Expect = 2e-18
 Identities = 58/144 (40%), Positives = 77/144 (53%), Gaps = 12/144 (8%)
 Frame = +2

Query: 50  MAAHDRHRKLLEDLTNTTSIYIKFCFSQCDPKANPSGLCFAECLPFCPSFCHVGGXXXXX 229
           MAA++ HR++LE+  N T   I  C   CD   NP+G C A+C   CP  C++       
Sbjct: 1   MAAYNFHREILEEPANATEAEI--CSIHCDSLQNPTGGCVAKCASICPYLCNISDSSPPP 58

Query: 230 XXXXXXXXXXXXXXGDP----NSPLSLPLKISLVFIVSSF----IYTIYKFY-IWHKSRR 382
                           P    +SPLSLPLKISLV +V +F    +YT+YKFY +W++SRR
Sbjct: 59  QSPPPLPTGGFILSTSPPKHHHSPLSLPLKISLVILVVTFSLFLLYTLYKFYTVWYRSRR 118

Query: 383 PR--VPLRENQETRDQ-IDLAVLD 445
            R   P  ENQET  + +D  VLD
Sbjct: 119 RRSPPPSPENQETHGEFLDHDVLD 142


>ref|XP_021993280.1| RING-H2 finger protein ATL54-like [Helianthus annuus]
 gb|OTG07726.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
          Length = 272

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 54/138 (39%), Positives = 73/138 (52%), Gaps = 11/138 (7%)
 Frame = +2

Query: 50  MAAHDRHRKLLEDLTNTTSIY----IKF--CFSQCDPKANPSGLCFAECLPFCPSFCHVG 211
           MAA  RHRKL +  +  + I+    I+F  C  QCDP  NP+ +C  EC   CP+FCH  
Sbjct: 1   MAAPSRHRKLTQYSSAPSPIHTPDTIEFLTCPLQCDPLYNPTHICSRECSSVCPTFCH-P 59

Query: 212 GXXXXXXXXXXXXXXXXXXXGDPNSPLSLPLKISLVFIVSSFIYTIYKFY-IWHKSRR-- 382
                                  + P SLPLKIS +F++++FIYT+YKFY IW +SR   
Sbjct: 60  EYSPTLSPSTTPYATLTPPDHHRHQPFSLPLKISFLFLIATFIYTLYKFYTIWCRSRPQR 119

Query: 383 --PRVPLRENQETRDQID 430
             P+  L ENQE+   +D
Sbjct: 120 TIPQPELVENQESNVVVD 137


>gb|KVH93400.1| Non-heme dioxygenase N-terminal domain-containing protein [Cynara
           cardunculus var. scolymus]
          Length = 672

 Score = 82.0 bits (201), Expect = 3e-15
 Identities = 54/139 (38%), Positives = 75/139 (53%), Gaps = 7/139 (5%)
 Frame = +2

Query: 50  MAAHDRHRKLLEDLTNTTSIYIKFCFSQCDPKANPSGLCFAECLPFCPSFCHVGGXXXXX 229
           MAA+  HRK++E+  N T      C  QCDP+ N +GLC + C   CP+ C+        
Sbjct: 1   MAAYSFHRKIMEETPNAT-----ICLIQCDPQQNLNGLCISLCSKVCPNVCNT----IQS 51

Query: 230 XXXXXXXXXXXXXXGDPNSPLSLPLKISLVFIVSSF----IYTIYKFY-IWHKSR-RPRV 391
                            +S LSLPLKISLV +V++F    +Y++YK Y +W++SR R R 
Sbjct: 52  APPPTDDYILIPPPIPHHSSLSLPLKISLVILVTTFSLFLLYSLYKLYTVWYRSRSRRRP 111

Query: 392 PLRENQETRDQ-IDLAVLD 445
           P   NQET D+ +D  VLD
Sbjct: 112 PPPGNQETLDEFVDHDVLD 130


>gb|KVI10915.1| Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus var. scolymus]
          Length = 333

 Score = 74.3 bits (181), Expect = 8e-13
 Identities = 49/136 (36%), Positives = 67/136 (49%), Gaps = 12/136 (8%)
 Frame = +2

Query: 50  MAAHDRHRKLLEDLTNTTSIYIKFCFSQCDPKANPSGLCFAECLPFCPSFCHV----GGX 217
           MAA  RHRK +ED T  T+I  ++C +QC+   NP+G+C + C   CPS C V       
Sbjct: 1   MAASSRHRKFMEDTTKATAID-RYCTTQCNLPLNPTGVCVSTCHYICPSICRVIDSSPPP 59

Query: 218 XXXXXXXXXXXXXXXXXXGDPNSPLSLPLKISLVFIVSS----FIYTIYKF-YIWHKS-- 376
                                + PLSLPL+ISL+F+  +    F+YT+ K   +W +S  
Sbjct: 60  SSSSFSPANSPYPSLPITKHHHPPLSLPLRISLIFLFVTFSLFFLYTLCKLSVVWCRSRC 119

Query: 377 -RRPRVPLRENQETRD 421
            R P  P  EN ET D
Sbjct: 120 HRTPPPPSPENYETND 135


>ref|XP_021988188.1| RING-H2 finger protein ATL54-like [Helianthus annuus]
 gb|OTG10734.1| putative zinc finger, RING/FYVE/PHD-type [Helianthus annuus]
          Length = 341

 Score = 65.1 bits (157), Expect = 2e-09
 Identities = 52/141 (36%), Positives = 74/141 (52%), Gaps = 15/141 (10%)
 Frame = +2

Query: 68  HRKLLEDLTNTTSIYIKFCFSQCDPKANPSGLCFAECL------PFCPSFCHVGGXXXXX 229
           HRK+++D +N+T+  I  C + CDP   PS  C + C+      P  PS  + GG     
Sbjct: 4   HRKIIQDPSNSTTGSI-ICTTDCDPLKTPSINCLS-CVFNESSSPPLPSPPYTGGYILDT 61

Query: 230 XXXXXXXXXXXXXXGDPNSPLSLPLKISLVFIVSSF----IYTIYKFY-IWHKSRR---P 385
                            +S LSLPLKISLV +V +F    +YT+YKFY +W+++RR   P
Sbjct: 62  PPKPH------------HSSLSLPLKISLVILVLTFSFFLLYTLYKFYTVWYRTRRRRTP 109

Query: 386 RVPLRENQETRDQ-IDLAVLD 445
             P  ENQE  ++ +D  VLD
Sbjct: 110 PPPPPENQEINNEFLDHDVLD 130


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