BLASTX nr result

ID: Chrysanthemum21_contig00028801 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00028801
         (414 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY86525.1| hypothetical protein LSAT_4X112480 [Lactuca sativa]     77   3e-14
ref|XP_023762448.1| uncharacterized protein LOC111910876 [Lactuc...    77   1e-13
ref|XP_022016963.1| E3 ubiquitin-protein ligase CIP8-like [Helia...    68   9e-11
ref|XP_022018917.1| E3 ubiquitin-protein ligase CIP8-like [Helia...    66   5e-10
gb|PLY83035.1| hypothetical protein LSAT_5X24400 [Lactuca sativa]      62   2e-08
ref|XP_023767046.1| uncharacterized protein LOC111915638 [Lactuc...    62   2e-08
gb|KVH98488.1| Zinc finger, RING/FYVE/PHD-type [Cynara carduncul...    61   5e-08
gb|KVI06480.1| Zinc finger, RING/FYVE/PHD-type [Cynara carduncul...    58   5e-07

>gb|PLY86525.1| hypothetical protein LSAT_4X112480 [Lactuca sativa]
          Length = 256

 Score = 77.0 bits (188), Expect = 3e-14
 Identities = 52/127 (40%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
 Frame = +2

Query: 50  VCWDAFQLDDXXXXXXXXXXXXXGPNVSLNXXXXXXXXXXXXXXI---LSMFFGAEADDD 220
           +CWD+F LDD              PN ++N                  LSMFFGAEADDD
Sbjct: 41  LCWDSFHLDDDNTTP--------NPNTNINGDFDWEEVDEHERIDGRELSMFFGAEADDD 92

Query: 221 ASXXXXXXXXXXXXXLGE---NRGGNTDWEVLLNVHNFEPNMDYEDDEYEAHNNREYEMF 391
           AS               E   +R G+ DWEVLLN  NFE N D    EY+ +N  EYEMF
Sbjct: 93  ASVLPGIPPRNHESHEEEEEEDRDGS-DWEVLLNAQNFEQNPDVSG-EYDEYNYTEYEMF 150

Query: 392 FGQFGDN 412
           FGQF D+
Sbjct: 151 FGQFADS 157


>ref|XP_023762448.1| uncharacterized protein LOC111910876 [Lactuca sativa]
          Length = 484

 Score = 77.0 bits (188), Expect = 1e-13
 Identities = 52/127 (40%), Positives = 61/127 (48%), Gaps = 6/127 (4%)
 Frame = +2

Query: 50  VCWDAFQLDDXXXXXXXXXXXXXGPNVSLNXXXXXXXXXXXXXXI---LSMFFGAEADDD 220
           +CWD+F LDD              PN ++N                  LSMFFGAEADDD
Sbjct: 269 LCWDSFHLDDDNTTP--------NPNTNINGDFDWEEVDEHERIDGRELSMFFGAEADDD 320

Query: 221 ASXXXXXXXXXXXXXLGE---NRGGNTDWEVLLNVHNFEPNMDYEDDEYEAHNNREYEMF 391
           AS               E   +R G+ DWEVLLN  NFE N D    EY+ +N  EYEMF
Sbjct: 321 ASVLPGIPPRNHESHEEEEEEDRDGS-DWEVLLNAQNFEQNPDVSG-EYDEYNYTEYEMF 378

Query: 392 FGQFGDN 412
           FGQF D+
Sbjct: 379 FGQFADS 385


>ref|XP_022016963.1| E3 ubiquitin-protein ligase CIP8-like [Helianthus annuus]
          Length = 317

 Score = 68.2 bits (165), Expect = 9e-11
 Identities = 45/134 (33%), Positives = 58/134 (43%), Gaps = 11/134 (8%)
 Frame = +2

Query: 44  FRVCWDAFQLDDXXXXXXXXXXXXXGPNVSLNXXXXXXXXXXXXXX-------ILSMFFG 202
           F + WDAF L+D               N + N                      LSMFFG
Sbjct: 88  FHLGWDAFHLEDEITNPNLNPNPNSISNANANAYVNEDFEWEEVDDQIDDEREALSMFFG 147

Query: 203 AEADDDASXXXXXXXXXXXXX-LGENRGGNTDWEVLLNVHNFEPNMDYED---DEYEAHN 370
            E DDDAS                 ++    +W+VL NV  FEPN+D +D   D+Y+ +N
Sbjct: 148 LEPDDDASVSPVLLIGFAEVAEQPRDQHDALEWQVLSNVQTFEPNLDSDDQEHDQYDEYN 207

Query: 371 NREYEMFFGQFGDN 412
             EYEMFFGQF D+
Sbjct: 208 YTEYEMFFGQFADS 221


>ref|XP_022018917.1| E3 ubiquitin-protein ligase CIP8-like [Helianthus annuus]
          Length = 349

 Score = 66.2 bits (160), Expect = 5e-10
 Identities = 36/79 (45%), Positives = 45/79 (56%), Gaps = 4/79 (5%)
 Frame = +2

Query: 185 LSMFFGAEADDDASXXXXXXXXXXXXX-LGENRGGNTDWEVLLNVHNFEPNMDYED---D 352
           LSMFFG E DDDAS                 ++    +W+VL NV  FEPN+D +D   D
Sbjct: 174 LSMFFGLEPDDDASVSPVLLTGFAEVAEQPRDQHDALEWQVLSNVQTFEPNLDSDDQEHD 233

Query: 353 EYEAHNNREYEMFFGQFGD 409
           +Y+ +N  EYEMFFGQF D
Sbjct: 234 QYDEYNYTEYEMFFGQFAD 252


>gb|PLY83035.1| hypothetical protein LSAT_5X24400 [Lactuca sativa]
          Length = 438

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 41/128 (32%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
 Frame = +2

Query: 47  RVCWDAFQLDDXXXXXXXXXXXXXGPNVSLNXXXXXXXXXXXXXXILSMFFGAEADDDAS 226
           R+CWDAFQL+D                   +              +L+MF  AEAD++ +
Sbjct: 223 RLCWDAFQLEDDDHSRWDIP-------AQQHFEWEEVDGGVNEREVLTMFLDAEADNNTT 275

Query: 227 XXXXXXXXXXXXXLGENRGGNTD------WEVLLNVHNFEPNMDYEDDEYEAHNNREYEM 388
                          E     T+      WEV LNVHN E N D E  ++E +N+ E+EM
Sbjct: 276 VDDLEWELFLNSHNHEANPTTTEANNYNEWEVFLNVHNLEANPDLEG-QFEDYNDAEHEM 334

Query: 389 FFGQFGDN 412
            FGQF DN
Sbjct: 335 LFGQFADN 342


>ref|XP_023767046.1| uncharacterized protein LOC111915638 [Lactuca sativa]
          Length = 454

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 41/128 (32%), Positives = 55/128 (42%), Gaps = 6/128 (4%)
 Frame = +2

Query: 47  RVCWDAFQLDDXXXXXXXXXXXXXGPNVSLNXXXXXXXXXXXXXXILSMFFGAEADDDAS 226
           R+CWDAFQL+D                   +              +L+MF  AEAD++ +
Sbjct: 239 RLCWDAFQLEDDDHSRWDIP-------AQQHFEWEEVDGGVNEREVLTMFLDAEADNNTT 291

Query: 227 XXXXXXXXXXXXXLGENRGGNTD------WEVLLNVHNFEPNMDYEDDEYEAHNNREYEM 388
                          E     T+      WEV LNVHN E N D E  ++E +N+ E+EM
Sbjct: 292 VDDLEWELFLNSHNHEANPTTTEANNYNEWEVFLNVHNLEANPDLEG-QFEDYNDAEHEM 350

Query: 389 FFGQFGDN 412
            FGQF DN
Sbjct: 351 LFGQFADN 358


>gb|KVH98488.1| Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus var. scolymus]
          Length = 444

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 38/121 (31%), Positives = 50/121 (41%)
 Frame = +2

Query: 47  RVCWDAFQLDDXXXXXXXXXXXXXGPNVSLNXXXXXXXXXXXXXXILSMFFGAEADDDAS 226
           R+ WDAFQL+D                 + +              IL+M F +EADDD S
Sbjct: 237 RLSWDAFQLEDDNDRG------------NQDFEWEEVDDRIDDREILNMIFESEADDDLS 284

Query: 227 XXXXXXXXXXXXXLGENRGGNTDWEVLLNVHNFEPNMDYEDDEYEAHNNREYEMFFGQFG 406
                          +    + +WEVLLNVHN E   D     Y+ +N  EY+M F QF 
Sbjct: 285 VLPDIPIATHELEEQQPDTSSLEWEVLLNVHNLEGTQDLAGGHYDEYNYAEYDMLFEQFA 344

Query: 407 D 409
           D
Sbjct: 345 D 345


>gb|KVI06480.1| Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus var. scolymus]
          Length = 372

 Score = 57.8 bits (138), Expect = 5e-07
 Identities = 26/39 (66%), Positives = 29/39 (74%)
 Frame = +2

Query: 293 DWEVLLNVHNFEPNMDYEDDEYEAHNNREYEMFFGQFGD 409
           +W+VL NVHNFEP  D  DD+Y   N  EYEMFFGQFGD
Sbjct: 241 EWQVLSNVHNFEPTPDLADDDY---NYTEYEMFFGQFGD 276


Top