BLASTX nr result

ID: Chrysanthemum21_contig00028788 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00028788
         (685 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023742396.1| protein NTM1-like 9 [Lactuca sativa] >gi|132...   149   8e-39
ref|XP_022029162.1| protein NTM1-like 9 [Helianthus annuus] >gi|...   134   4e-33
gb|KVH91756.1| No apical meristem (NAM) protein [Cynara carduncu...    82   2e-14
ref|XP_022036329.1| uncharacterized protein LOC110938166 [Helian...    55   4e-06

>ref|XP_023742396.1| protein NTM1-like 9 [Lactuca sativa]
 gb|PLY67248.1| hypothetical protein LSAT_6X80780 [Lactuca sativa]
          Length = 495

 Score =  149 bits (377), Expect = 8e-39
 Identities = 81/158 (51%), Positives = 103/158 (65%), Gaps = 21/158 (13%)
 Frame = -1

Query: 667 GSSSRARPDIKFRTRQFQVDQNSENIMGQGNASRRLRLLIEPSSGSAGHTD-------DQ 509
           GS    RPDIK RTRQ Q D N E++MGQG ASRR+RL I+ SSGS+ H D       ++
Sbjct: 338 GSGQTGRPDIKIRTRQSQTDPNPEHVMGQGTASRRIRLQIDSSSGSSSHGDSCSNDHENE 397

Query: 508 EETSSTASEVCDNFEDSQTCEASKDPAQGDDQRLR--------------LQMKPSMLVKA 371
           EETSS+ SEVCD  ED+     +    QG+D+RLR              +Q++P +LVKA
Sbjct: 398 EETSSSVSEVCDTGEDTGITSNAYKTDQGEDERLRSKKKQEGGVSVISNIQIQPLILVKA 457

Query: 370 YCGGHFLTSPLIQILSLFLVILVMFISLGIPECPMFRL 257
           YCGGHFL S L +I+S+FLVI +M ISLG+ ECP+F L
Sbjct: 458 YCGGHFLRSSLFKIISVFLVIFLMVISLGVAECPIFLL 495


>ref|XP_022029162.1| protein NTM1-like 9 [Helianthus annuus]
 gb|OTG32123.1| putative NAC transcription factor-like 9 [Helianthus annuus]
          Length = 478

 Score =  134 bits (337), Expect = 4e-33
 Identities = 80/162 (49%), Positives = 105/162 (64%), Gaps = 19/162 (11%)
 Frame = -1

Query: 685 TNVPDIGSSSRARPDIKFRTRQFQ------VDQNSENIMGQGNASRRLRLLIE-PSSGSA 527
           TN+   GSS+  +P+ KFR+R  +       D +SE++MGQG ASRRLRLL+  PS G  
Sbjct: 325 TNIHATGSSTMGQPEFKFRSRDSRSPRTDRTDPSSEDVMGQGTASRRLRLLVNSPSHG-- 382

Query: 526 GHTDDQEETSSTASEVCDNFEDSQ-TCEASKDPAQGDDQRLRLQMK-----------PSM 383
                 +ETSST SEVCD+ +D++ + + SK+  +GDDQR R QMK           P +
Sbjct: 383 ------DETSSTESEVCDSIDDTEISSDWSKETDEGDDQRSRSQMKQDGFSGRIQMQPLV 436

Query: 382 LVKAYCGGHFLTSPLIQILSLFLVILVMFISLGIPECPMFRL 257
           LVKAY GG FL SP IQ++S+FLVI VM ISLG+ ECP+F L
Sbjct: 437 LVKAYRGGRFLRSPWIQVMSIFLVIFVMIISLGVTECPIFFL 478


>gb|KVH91756.1| No apical meristem (NAM) protein [Cynara cardunculus var. scolymus]
          Length = 446

 Score = 82.4 bits (202), Expect = 2e-14
 Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 11/93 (11%)
 Frame = -1

Query: 502 TSSTASEVCDNFEDS-QTCEASK----------DPAQGDDQRLRLQMKPSMLVKAYCGGH 356
           T+ + +EVCD+ ED+ ++ + S+          D  + D +  RLQMKP +LV+AYCGG 
Sbjct: 354 TTKSDAEVCDDAEDTARSFDGSERINPELVPKHDAKENDQKHNRLQMKPLILVRAYCGGR 413

Query: 355 FLTSPLIQILSLFLVILVMFISLGIPECPMFRL 257
           FL+S LIQI+S+FLVI VM ISLG+ E P+F L
Sbjct: 414 FLSSSLIQIMSIFLVIFVMMISLGVRERPIFHL 446


>ref|XP_022036329.1| uncharacterized protein LOC110938166 [Helianthus annuus]
          Length = 126

 Score = 55.1 bits (131), Expect = 4e-06
 Identities = 34/71 (47%), Positives = 44/71 (61%), Gaps = 12/71 (16%)
 Frame = -1

Query: 484 EVCDNFEDSQ-TCEASKDPAQGDDQRLRLQMK-----------PSMLVKAYCGGHFLTSP 341
           +VCD+ +D++ + + SK+  +GDDQR R QMK           P +LVKAY GG FL SP
Sbjct: 6   QVCDSVDDTEISSDWSKETDEGDDQRSRSQMKQDDFSGRIQMQPLVLVKAYRGGRFLRSP 65

Query: 340 LIQILSLFLVI 308
            IQI  L LVI
Sbjct: 66  WIQIEKLNLVI 76


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