BLASTX nr result

ID: Chrysanthemum21_contig00028708 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00028708
         (370 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI00055.1| hypothetical protein Ccrd_021729 [Cynara carduncu...    76   1e-13
ref|XP_022039466.1| uncharacterized protein LOC110942076 [Helian...    67   2e-10

>gb|KVI00055.1| hypothetical protein Ccrd_021729 [Cynara cardunculus var. scolymus]
          Length = 457

 Score = 76.3 bits (186), Expect = 1e-13
 Identities = 48/126 (38%), Positives = 56/126 (44%), Gaps = 15/126 (11%)
 Frame = -1

Query: 361 MRRSLGKLSYPAIGQTSRQALFXXXXXXXXXXXXXXXXXS-------------PKFSFVD 221
           MRRSLGK S+ AIG T  +A+                                PKFS +D
Sbjct: 1   MRRSLGKFSHQAIGHTGGKAILLSSSSSFDFSTTAGNNGGGGGGGGRGRGSDFPKFSLID 60

Query: 220 SIPSKNEPNSPGDQTSIPSPLGHGRGKXXXXXXXXXXXXXXQAPPSNSGPAA--GRGTVQ 47
           S+P K E  +P D TS P P GHGRGK               A  +N G  A  GRGT Q
Sbjct: 61  SVPGKREQTNPEDDTSSPPPFGHGRGKPLSSSPNIPPFSLIGASGANRGTVAGRGRGTFQ 120

Query: 46  SPQFQE 29
           SPQF+E
Sbjct: 121 SPQFEE 126


>ref|XP_022039466.1| uncharacterized protein LOC110942076 [Helianthus annuus]
 ref|XP_022039467.1| uncharacterized protein LOC110942076 [Helianthus annuus]
 ref|XP_022039468.1| uncharacterized protein LOC110942076 [Helianthus annuus]
          Length = 483

 Score = 67.4 bits (163), Expect = 2e-10
 Identities = 43/114 (37%), Positives = 51/114 (44%), Gaps = 12/114 (10%)
 Frame = -1

Query: 361 MRRSLGKLSYPAIGQTSRQALFXXXXXXXXXXXXXXXXXS------------PKFSFVDS 218
           MRRSLGKLS+PAIG TSR+AL                               PKFSFV+S
Sbjct: 1   MRRSLGKLSHPAIGHTSRKALLLSSPFDFSTHAGGNSGGGGGGRGRGRGSDFPKFSFVNS 60

Query: 217 IPSKNEPNSPGDQTSIPSPLGHGRGKXXXXXXXXXXXXXXQAPPSNSGPAAGRG 56
            P+++E   P D+T   +PLGHGRGK                P   S    GRG
Sbjct: 61  GPNESEETRPDDETPFRAPLGHGRGKPLPPPPNVSRFSSPDPPSGGSVAGRGRG 114


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