BLASTX nr result

ID: Chrysanthemum21_contig00028409 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00028409
         (363 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVH99341.1| Protein phosphatase 2C (PP2C)-like protein [Cynar...    41   3e-06

>gb|KVH99341.1| Protein phosphatase 2C (PP2C)-like protein [Cynara cardunculus var.
           scolymus]
          Length = 502

 Score = 41.2 bits (95), Expect(2) = 3e-06
 Identities = 22/34 (64%), Positives = 27/34 (79%)
 Frame = +2

Query: 74  MVVHAVAAR*GRKVMAEKMAALAGQRA*EEDRHT 175
           +VVHAV A  G +VMA+K+AALA QRA E+DR T
Sbjct: 427 VVVHAVRAGLGPQVMAQKLAALAQQRAHEKDRQT 460



 Score = 37.4 bits (85), Expect(2) = 3e-06
 Identities = 21/39 (53%), Positives = 25/39 (64%)
 Frame = +1

Query: 157 RGRQTHPLSVAILSDAFQCYTTKLDDITIVASCITTSKK 273
           + RQT P S A     F+ Y  KLDDIT+V S ITTSK+
Sbjct: 456 KDRQT-PFSAAAQEAGFRYYGGKLDDITVVVSYITTSKE 493


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