BLASTX nr result
ID: Chrysanthemum21_contig00028328
seq
BLASTX 2.2.26 [Sep-21-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Chrysanthemum21_contig00028328 (1316 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 149,584,005 sequences; 54,822,741,787 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|KVI09777.1| DNA-directed RNA polymerase, subunit 2 [Cynara ca... 673 0.0 ref|XP_023757782.1| DNA-directed RNA polymerases IV and V subuni... 665 0.0 ref|XP_021973859.1| DNA-directed RNA polymerases IV and V subuni... 660 0.0 gb|AAY68198.1| RNA polymerase IV second largest subunit, partial... 511 e-169 ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a... 507 e-165 ref|XP_016481856.1| PREDICTED: DNA-directed RNA polymerases IV a... 505 e-165 ref|XP_016571806.1| PREDICTED: DNA-directed RNA polymerases IV a... 504 e-164 gb|OTF95570.1| putative RNA polymerase, beta subunit, protrusion... 503 e-164 gb|PHU28834.1| DNA-directed RNA polymerases IV and V subunit 2 [... 504 e-164 gb|PHT58638.1| DNA-directed RNA polymerases IV and V subunit 2 [... 504 e-164 gb|AAY68206.1| RNA polymerase IV second largest subunit, partial... 501 e-164 ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV a... 503 e-164 ref|XP_022012378.1| DNA-directed RNA polymerases IV and V subuni... 503 e-164 emb|CBI21137.3| unnamed protein product, partial [Vitis vinifera] 503 e-164 ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a... 502 e-164 ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a... 502 e-163 gb|OTG06531.1| putative nuclear RNA polymerase D2A [Helianthus a... 500 e-163 ref|XP_019252729.1| PREDICTED: DNA-directed RNA polymerases IV a... 501 e-163 gb|PHU23638.1| DNA-directed RNA polymerases IV and V subunit 2 [... 501 e-163 gb|PHT87914.1| DNA-directed RNA polymerases IV and V subunit 2 [... 501 e-163 >gb|KVI09777.1| DNA-directed RNA polymerase, subunit 2 [Cynara cardunculus var. scolymus] Length = 1053 Score = 673 bits (1737), Expect = 0.0 Identities = 328/436 (75%), Positives = 369/436 (84%) Frame = +1 Query: 1 ERVYVKLVDTHFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKDNTIL 180 ERVYVKL+DTH RGGGKVIT YLFNSVEIPIW+LFFALGV+SDK+V+DLIDA+ KDNTI+ Sbjct: 212 ERVYVKLLDTHIRGGGKVITVYLFNSVEIPIWILFFALGVSSDKEVVDLIDAEAKDNTIV 271 Query: 181 NTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLRGFNR 360 NTL ASIYDAEQK KDFRK+GKAF L++AL+QKW Y PKQ++K CIEEILFPNL GFNR Sbjct: 272 NTLLASIYDAEQKFKDFRKEGKAFNHLSEALRQKWSYTPKQTFKSCIEEILFPNLHGFNR 331 Query: 361 KARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMIKALQ 540 KAR+LGYMVKCLLEAYTGRRKVDDRDSFRSKRV+ VRRMIKALQ Sbjct: 332 KARFLGYMVKCLLEAYTGRRKVDDRDSFRSKRVELAGELLERELRVHLKHAVRRMIKALQ 391 Query: 541 RDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANPLQMM 720 RDLWG+R L+PIE Y+DA+VVTNGLSRAFSTG W HPYKRMERISGVVA L+RANPLQMM Sbjct: 392 RDLWGERPLHPIEHYLDASVVTNGLSRAFSTGAWVHPYKRMERISGVVAHLRRANPLQMM 451 Query: 721 ADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTHVQVN 900 ADMRR+RQQV YTGRVGDARYPHPSHWGK+C+MTTPDGENCGLVKN +STGLVST+V N Sbjct: 452 ADMRRTRQQVQYTGRVGDARYPHPSHWGKVCFMTTPDGENCGLVKNFSSTGLVSTNVPEN 511 Query: 901 LLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEVHYQV 1080 L DVLI+ GM+ELVD++ LG KHKVF NGDWVG+CDDA SLV IRSKRR KE+ YQV Sbjct: 512 LFDVLIKCGMKELVDDISTSLGGKHKVFVNGDWVGICDDAASLVDVIRSKRRRKEIPYQV 571 Query: 1081 EIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXXXXXX 1260 EI +D+K+ EVRIF+DAGRLMRPLL VEN+K IKFLK DYSFQ+LLD+ Sbjct: 572 EIKRDEKHGEVRIFSDAGRLMRPLLFVENLKKIKFLKGSDYSFQNLLDNGIIELIGTEEE 631 Query: 1261 XNCYTAWGVKYLFHDE 1308 +CYTAWGV+YLFHD+ Sbjct: 632 EDCYTAWGVQYLFHDK 647 >ref|XP_023757782.1| DNA-directed RNA polymerases IV and V subunit 2-like [Lactuca sativa] ref|XP_023757783.1| DNA-directed RNA polymerases IV and V subunit 2-like [Lactuca sativa] Length = 1167 Score = 665 bits (1716), Expect = 0.0 Identities = 323/433 (74%), Positives = 365/433 (84%) Frame = +1 Query: 1 ERVYVKLVDTHFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKDNTIL 180 ERVYVKLVDTH RGGGKVIT YL NSVEIP+WMLFFALGVTSDK+VIDLIDAD DNTI+ Sbjct: 241 ERVYVKLVDTHIRGGGKVITVYLLNSVEIPVWMLFFALGVTSDKEVIDLIDADANDNTIM 300 Query: 181 NTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLRGFNR 360 NTL ASIYDA+QKSKDFRK+GKA L+ ALKQKW YAPK ++K+CIE++LFPNL GFNR Sbjct: 301 NTLLASIYDADQKSKDFRKEGKALSNLSYALKQKWTYAPKGTFKNCIEDLLFPNLHGFNR 360 Query: 361 KARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMIKALQ 540 KAR+LGYMVKCLLEAYTGRRKVDDRDSFRSKRV+ RRM+KALQ Sbjct: 361 KARFLGYMVKCLLEAYTGRRKVDDRDSFRSKRVELAGELLERELRVHLKHAARRMVKALQ 420 Query: 541 RDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANPLQMM 720 RDLWGDR L+PIE Y+DA+VVTNGLSRAFSTG W HPYKRMERISGVVA L+RANPLQMM Sbjct: 421 RDLWGDRPLHPIEHYLDASVVTNGLSRAFSTGAWVHPYKRMERISGVVAHLRRANPLQMM 480 Query: 721 ADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTHVQVN 900 ADMRR+RQQV YTGRVGDARYPHPSHWGK+C+MTTPDGENCGLVKNL+S G+VST+VQ N Sbjct: 481 ADMRRTRQQVQYTGRVGDARYPHPSHWGKICFMTTPDGENCGLVKNLSSAGIVSTNVQEN 540 Query: 901 LLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEVHYQV 1080 L+ +L++SGM+ELVD+ L G KHKVF NGDWVG+CDD+ SLV D RSKRR KEV YQV Sbjct: 541 LVGILMESGMKELVDDTSPLFGGKHKVFVNGDWVGICDDSASLVDDFRSKRRRKEVPYQV 600 Query: 1081 EIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXXXXXX 1260 EI +D+KN+EVRIF+DAGRLMRPLL VEN+KNIK LK DYSFQSL+++ Sbjct: 601 EIKRDEKNKEVRIFSDAGRLMRPLLCVENLKNIKSLKTGDYSFQSLVNNGIIELIGTEEE 660 Query: 1261 XNCYTAWGVKYLF 1299 +CYTAWGVK+LF Sbjct: 661 EDCYTAWGVKHLF 673 >ref|XP_021973859.1| DNA-directed RNA polymerases IV and V subunit 2-like [Helianthus annuus] ref|XP_021973867.1| DNA-directed RNA polymerases IV and V subunit 2-like [Helianthus annuus] gb|OTG36794.1| putative DNA-directed RNA polymerase II subunit RPB2 [Helianthus annuus] Length = 1155 Score = 660 bits (1703), Expect = 0.0 Identities = 319/435 (73%), Positives = 367/435 (84%) Frame = +1 Query: 1 ERVYVKLVDTHFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKDNTIL 180 ERVYVKLVD+ RGGGKVIT +LF+S+EIPIW+LFFALGVTSDK+VIDLID D KDNTI+ Sbjct: 225 ERVYVKLVDSRIRGGGKVITVFLFSSIEIPIWLLFFALGVTSDKEVIDLIDTDCKDNTIV 284 Query: 181 NTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLRGFNR 360 NTL ASIY A+QKSKDFR +GKAF L++ LK+KW Y PKQ++KDCIEE LFP LRGFNR Sbjct: 285 NTLLASIYAADQKSKDFRNEGKAFSILSNELKEKWTYTPKQAFKDCIEETLFPKLRGFNR 344 Query: 361 KARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMIKALQ 540 KAR+LGYMVKCLLEAYTGRRKVDDRDSFRSKRV+ VRRM KALQ Sbjct: 345 KARFLGYMVKCLLEAYTGRRKVDDRDSFRSKRVELAGELLEREVRVHLKHAVRRMTKALQ 404 Query: 541 RDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANPLQMM 720 RDL+G+R L+PIE Y+DA+VVTNGLSRAFSTG W HPYKRMERISGVVA L+RANP QMM Sbjct: 405 RDLYGERPLHPIEHYLDASVVTNGLSRAFSTGAWVHPYKRMERISGVVAHLRRANPTQMM 464 Query: 721 ADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTHVQVN 900 ADMRR+RQQV YTGRVGDARYPHPSHWG++CYMTTPDGENCGLVKNLASTG+VS ++QVN Sbjct: 465 ADMRRTRQQVQYTGRVGDARYPHPSHWGRVCYMTTPDGENCGLVKNLASTGIVSVNIQVN 524 Query: 901 LLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEVHYQV 1080 LLD+L++SGMEELVD+ I +G+KHKVF NGDWVG+C +A SLVAD RSKRR KEVH+QV Sbjct: 525 LLDMLMKSGMEELVDDNSISIGKKHKVFVNGDWVGICANAASLVADFRSKRRKKEVHHQV 584 Query: 1081 EIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXXXXXX 1260 EI DDKN EVRIF+DAGR+MRPLL+VE +KNIK L+ DYSFQSL+D+ Sbjct: 585 EIKLDDKNGEVRIFSDAGRIMRPLLLVEGLKNIKLLESGDYSFQSLIDNGIVELIGSEEE 644 Query: 1261 XNCYTAWGVKYLFHD 1305 +CYTAWG+K+LFH+ Sbjct: 645 EDCYTAWGIKHLFHN 659 >gb|AAY68198.1| RNA polymerase IV second largest subunit, partial [Rhododendron macrophyllum] Length = 1019 Score = 511 bits (1317), Expect = e-169 Identities = 250/436 (57%), Positives = 327/436 (75%), Gaps = 3/436 (0%) Frame = +1 Query: 1 ERVYVKLVDT---HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKDN 171 +RVY+KL H RGG KV++ Y F++VE PIW+LFFALG +SDK+V++LID D +D+ Sbjct: 86 KRVYIKLEPPKREHIRGGEKVLSVY-FSAVEFPIWILFFALGASSDKEVVNLIDCDGEDS 144 Query: 172 TILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLRG 351 I+N L ASIYDA++ K FR+ A ++ + + + P++S + + LFPNL G Sbjct: 145 RIVNVLIASIYDADENCKGFRRGRNAINDIMKKI-ENCKFPPQESIEAFLSNYLFPNLSG 203 Query: 352 FNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMIK 531 F +KAR+LGYMVKCLL+AYTGRRK+D+RD FR+KR++ RRM+K Sbjct: 204 FRQKARFLGYMVKCLLQAYTGRRKIDNRDDFRNKRLELAGELLERELRVHVKHAERRMVK 263 Query: 532 ALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANPL 711 A+QRDL+G+R ++ IE Y+DA+++TNGLSRAFSTG W HPYK+MERISGVVA L+R NPL Sbjct: 264 AMQRDLYGERVIHAIEHYLDASIITNGLSRAFSTGAWSHPYKKMERISGVVATLRRTNPL 323 Query: 712 QMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTHV 891 Q +ADMR++RQQVSYTG+VGDARYPHPSHWGK+C+++TPDGENCGLVKNLA TGLVST++ Sbjct: 324 QTIADMRKTRQQVSYTGKVGDARYPHPSHWGKICFLSTPDGENCGLVKNLAITGLVSTNI 383 Query: 892 QVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEVH 1071 + + LD L+ SGME+LVD+ LL K KVF +G+WVGVC D+ S VA +R KRR KEV Sbjct: 384 EEHFLDKLLDSGMEKLVDDTSTLLSGKVKVFLDGNWVGVCGDSVSFVAALRRKRRRKEVP 443 Query: 1072 YQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXXX 1251 +QVEI +D+++REVR+F+DAGR++RPLLVVEN+ IK K DYSFQSLLD Sbjct: 444 HQVEIKRDEQHREVRVFSDAGRILRPLLVVENLGKIKASKGGDYSFQSLLDKGVIEFIGT 503 Query: 1252 XXXXNCYTAWGVKYLF 1299 +C TAWG+ YLF Sbjct: 504 EEEEDCRTAWGINYLF 519 >ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Nicotiana tomentosiformis] Length = 1220 Score = 507 bits (1305), Expect = e-165 Identities = 249/435 (57%), Positives = 324/435 (74%), Gaps = 4/435 (0%) Frame = +1 Query: 4 RVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKDN 171 RVY+KL +T H +G K +T Y F+ E+PIW+LFFALGV+SD++V+DLID D++D Sbjct: 288 RVYIKLAETLKLEHIKGVEKALTVY-FSVAEMPIWILFFALGVSSDREVVDLIDVDIEDT 346 Query: 172 TILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLRG 351 I+N L ASI+DA++K +DFRK KA + D L + + P++S ++CI++ LFPNL G Sbjct: 347 NIVNILVASIHDADKKCEDFRKGKKALAYV-DRLIKGCRFPPQESVEECIKQYLFPNLSG 405 Query: 352 FNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMIK 531 +KAR+LGYMVK LL A+ GRRKVD+RD FR+KR++ RRM+K Sbjct: 406 LKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLK 465 Query: 532 ALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANPL 711 A+QRDL+GDR + PIE Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA ++R NPL Sbjct: 466 AMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPL 525 Query: 712 QMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTHV 891 QM ADMR++RQQV+YTG+VGDARYPHPSHWGK+C+++TPDGENCGLVKNLAS GLVST + Sbjct: 526 QMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTI 585 Query: 892 QVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEVH 1071 LL+ L + GM++LVD+ I L K KV NGDWVGVC+D+ V+ +R KRR EV Sbjct: 586 LKPLLETLYRCGMQKLVDDSAISLHGKQKVLLNGDWVGVCEDSALFVSKLRRKRRRNEVP 645 Query: 1072 YQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXXX 1251 +QVE+ +D++ EVRIF+DAGR++RPLLVV N+K IK LK DY FQSLLD+ Sbjct: 646 HQVEVKRDEQQGEVRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGP 705 Query: 1252 XXXXNCYTAWGVKYL 1296 +C TAWGV+YL Sbjct: 706 EEEEDCRTAWGVEYL 720 >ref|XP_016481856.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Nicotiana tabacum] Length = 1220 Score = 505 bits (1300), Expect = e-165 Identities = 248/435 (57%), Positives = 323/435 (74%), Gaps = 4/435 (0%) Frame = +1 Query: 4 RVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKDN 171 RVY+KL +T H +G K +T Y F+ E+PIW+LFFALGV+SD++V+DLID D++D Sbjct: 288 RVYIKLAETLKLEHIKGVEKALTVY-FSVAEMPIWILFFALGVSSDREVVDLIDVDIEDT 346 Query: 172 TILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLRG 351 I+N L ASI+DA++K +DFRK KA + D L + + P++S ++CI++ LFPNL G Sbjct: 347 NIVNILVASIHDADKKCEDFRKGKKALAYV-DRLIKGCRFPPQESVEECIKQYLFPNLSG 405 Query: 352 FNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMIK 531 +KAR+LGYMVK LL A+ GRRKVD+RD FR+KR++ RRM+K Sbjct: 406 LKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLK 465 Query: 532 ALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANPL 711 A+QRDL+GDR + PIE Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA ++R NPL Sbjct: 466 AMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPL 525 Query: 712 QMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTHV 891 QM ADMR++RQQV+YTG+VGDARYPHPSHWGK+C+++TPDGENCGLVKNLAS GLVST + Sbjct: 526 QMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTI 585 Query: 892 QVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEVH 1071 LL+ L + GM++LVD+ L K KV NGDWVGVC+D+ V+ +R KRR EV Sbjct: 586 LKPLLETLYRCGMQKLVDDSATSLHGKQKVLLNGDWVGVCEDSALFVSKLRRKRRRNEVP 645 Query: 1072 YQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXXX 1251 +QVE+ +D++ EVRIF+DAGR++RPLLVV N+K IK LK DY FQSLLD+ Sbjct: 646 HQVEVKRDEQQGEVRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGP 705 Query: 1252 XXXXNCYTAWGVKYL 1296 +C TAWGV+YL Sbjct: 706 EEEEDCRTAWGVEYL 720 >ref|XP_016571806.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Capsicum annuum] gb|PHT93109.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum annuum] Length = 1220 Score = 504 bits (1299), Expect = e-164 Identities = 249/440 (56%), Positives = 324/440 (73%), Gaps = 8/440 (1%) Frame = +1 Query: 1 ERVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKD 168 +RVY+KLV+T H +G K +T Y E+PIW+LFFALGV+SD++V+DLID D++D Sbjct: 284 KRVYLKLVETLKLEHIKGEEKALTVYFL--AEMPIWILFFALGVSSDREVVDLIDVDIED 341 Query: 169 NTILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLR 348 N I++ L ASI+DA +K +DFRK KA + D L + + P++S DCI+E LFPNL Sbjct: 342 NNIVSILVASIHDANEKCEDFRKGKKALVHV-DRLIKNCKFPPQESVGDCIKEYLFPNLS 400 Query: 349 GFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMI 528 G +KAR+LGYMVKCLL +Y GRRKVD+RD FR+KR+D RRM+ Sbjct: 401 GLKQKARFLGYMVKCLLHSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMV 460 Query: 529 KALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANP 708 +A+QRDL GDR + PIE Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA L+R NP Sbjct: 461 RAMQRDLCGDREVQPIEQYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 520 Query: 709 LQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTH 888 LQM AD+R++RQQV+YTG+VGDARYPHPSHWGK+C+++TPDGENCGLVKNLAS GL+ST Sbjct: 521 LQMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLISTT 580 Query: 889 VQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEV 1068 V LL+ L + GM++LV++ L RK KV +GDWVGVC+D+ S V+ +R KRR EV Sbjct: 581 VLKPLLETLFRCGMQKLVNDSATSLHRKQKVLLDGDWVGVCEDSASFVSKLRRKRRRNEV 640 Query: 1069 HYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKE----RDYSFQSLLDHXXX 1236 +QVE+ +D++ EVRIF+DAGR+MRPLLVV N+K IK LK+ +Y FQ+LLD+ Sbjct: 641 PHQVEVKRDEQQGEVRIFSDAGRIMRPLLVVSNLKKIKALKDVMKGEEYGFQTLLDNGII 700 Query: 1237 XXXXXXXXXNCYTAWGVKYL 1296 +C AWGV+YL Sbjct: 701 ELIGSEEEEDCRIAWGVEYL 720 >gb|OTF95570.1| putative RNA polymerase, beta subunit, protrusion, DNA-directed RNA polymerase, subunit 2 [Helianthus annuus] Length = 1170 Score = 503 bits (1295), Expect = e-164 Identities = 249/438 (56%), Positives = 317/438 (72%), Gaps = 5/438 (1%) Frame = +1 Query: 1 ERVYVKLVDT-----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVK 165 +RVYVKL DT GG +VI Y + ++PIW+LFFALGV+SDK+V+DLIDAD+ Sbjct: 233 KRVYVKLTDTPNNIEDIVGGAQVINVYTLSLEDMPIWILFFALGVSSDKEVVDLIDADIT 292 Query: 166 DNTILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNL 345 D I+N L ASI+ A++ FRK G+ E D L +K + PK+S ++CIE LFPN+ Sbjct: 293 DGNIVNILIASIHAADETCDGFRK-GRNALEFVDKLLKKSSFPPKESVEECIENYLFPNI 351 Query: 346 RGFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRM 525 GF+RKARYLGYMVKCLLE Y G+RKVD++D FR+KR++ V+RM Sbjct: 352 IGFSRKARYLGYMVKCLLEGYAGQRKVDNKDDFRNKRLELAGELIERELNIHLRHAVKRM 411 Query: 526 IKALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRAN 705 +K+LQRDL+ DR ++PIE Y D+A++TNGLSRAFSTG W HP K ME+ SGVVA L+RAN Sbjct: 412 VKSLQRDLYPDRVVHPIEQYFDSAIITNGLSRAFSTGTWSHPLKYMEKTSGVVAMLRRAN 471 Query: 706 PLQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVST 885 PLQM++DMRR+RQQV Y G+ GDARYPHPSHWGK+CY++TPDGENCGL+KNLA+T LVST Sbjct: 472 PLQMISDMRRTRQQVLYAGKAGDARYPHPSHWGKICYLSTPDGENCGLIKNLAATALVST 531 Query: 886 HVQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKE 1065 V+ +L D L+ GME+LVD+ L K+F NGDWVG C D+ S VA+ RSKRR K+ Sbjct: 532 TVREDLSDALLACGMEKLVDDTSTSLSGMDKIFVNGDWVGTCKDSASFVAEFRSKRRRKQ 591 Query: 1066 VHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXX 1245 V +QVEI +D K++EVRIF DAGR++RPLLVV+N+ IK LK YSFQ LLD+ Sbjct: 592 VPHQVEIKRDAKHKEVRIFCDAGRILRPLLVVKNLHKIKLLKGGGYSFQDLLDNGVVELI 651 Query: 1246 XXXXXXNCYTAWGVKYLF 1299 +C TAW +KYLF Sbjct: 652 GTEEEEDCCTAWDIKYLF 669 >gb|PHU28834.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum chinense] Length = 1220 Score = 504 bits (1298), Expect = e-164 Identities = 250/440 (56%), Positives = 323/440 (73%), Gaps = 8/440 (1%) Frame = +1 Query: 1 ERVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKD 168 +RVY+KLV+T H +G K +T Y E+PIW+LFFALGVTSD++V+DLID D++D Sbjct: 284 KRVYLKLVETLKLEHIKGEEKALTVYFL--AEMPIWILFFALGVTSDREVVDLIDVDIED 341 Query: 169 NTILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLR 348 N I++ L ASI+DA +K +DFRK KA + D L + + P++S DCI+E LFPNL Sbjct: 342 NNIVSILVASIHDANEKCEDFRKGKKALVHV-DRLIKNCKFPPQESVGDCIKEYLFPNLS 400 Query: 349 GFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMI 528 G +KAR+LGYMVKCLL +Y GRRKVD+RD FR+KR+D RRM+ Sbjct: 401 GLKQKARFLGYMVKCLLHSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMV 460 Query: 529 KALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANP 708 +A+QRDL GDR + PIE Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA L+R NP Sbjct: 461 RAMQRDLCGDREVQPIEQYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 520 Query: 709 LQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTH 888 LQM AD+R++RQQV+YTG+VGDARYPHPSHWGK+C+++TPDGENCGLVKNLAS GL+ST Sbjct: 521 LQMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLISTT 580 Query: 889 VQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEV 1068 V LL+ L + GM++LV++ L RK KV +GDWVGVC+D+ S V+ +R KRR EV Sbjct: 581 VLKPLLETLFRCGMQKLVNDSATSLHRKQKVLLDGDWVGVCEDSASFVSKLRRKRRRNEV 640 Query: 1069 HYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKE----RDYSFQSLLDHXXX 1236 QVE+ +D++ EVRIF+DAGR+MRPLLVV N+K IK LK+ +Y FQ+LLD+ Sbjct: 641 PDQVEVKRDEQQGEVRIFSDAGRIMRPLLVVSNLKKIKALKDVMKGEEYGFQTLLDNGII 700 Query: 1237 XXXXXXXXXNCYTAWGVKYL 1296 +C AWGV+YL Sbjct: 701 ELIGSEEEEDCRIAWGVEYL 720 >gb|PHT58638.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum baccatum] Length = 1220 Score = 504 bits (1297), Expect = e-164 Identities = 248/440 (56%), Positives = 324/440 (73%), Gaps = 8/440 (1%) Frame = +1 Query: 1 ERVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKD 168 +RVY+KLV+T H +G K +T Y E+PIW+LFFALGV+SD++V+DLID D++D Sbjct: 284 KRVYLKLVETLKLEHIKGEEKALTVYFL--AEMPIWILFFALGVSSDREVVDLIDVDIED 341 Query: 169 NTILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLR 348 N I++ L ASI+DA +K +DFRK KA + D + + + P++S DCI+E LFPNL Sbjct: 342 NKIVSILVASIHDANEKCEDFRKGKKALAHV-DRIIKNCKFPPQESVGDCIKEYLFPNLS 400 Query: 349 GFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMI 528 G +KAR+LGYMVKCLL +Y GRRKVD+RD FR+KR+D RRM+ Sbjct: 401 GLKQKARFLGYMVKCLLHSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMV 460 Query: 529 KALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANP 708 +A+QRDL GDR + PIE Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA L+R NP Sbjct: 461 RAMQRDLCGDREVQPIEQYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 520 Query: 709 LQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTH 888 LQM AD+R++RQQV+YTG+VGDARYPHPSHWGK+C+++TPDGENCGLVKNLAS GL+ST Sbjct: 521 LQMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLISTT 580 Query: 889 VQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEV 1068 V LL+ L + GM++LV++ L RK KV +GDWVGVC+D+ S V+ +R KRR EV Sbjct: 581 VLKPLLETLFRCGMQKLVNDSATSLHRKQKVLLDGDWVGVCEDSASFVSKLRRKRRRNEV 640 Query: 1069 HYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKE----RDYSFQSLLDHXXX 1236 +QVE+ +D++ EVRIF+DAGR+MRPLLVV N+K IK LK+ +Y FQ+LLD+ Sbjct: 641 PHQVEVKRDEQQGEVRIFSDAGRIMRPLLVVSNLKKIKALKDVMKGEEYGFQTLLDNGII 700 Query: 1237 XXXXXXXXXNCYTAWGVKYL 1296 +C AWGV+YL Sbjct: 701 ELIGSEEEEDCRIAWGVEYL 720 >gb|AAY68206.1| RNA polymerase IV second largest subunit, partial [Solanum lycopersicum] Length = 1123 Score = 501 bits (1290), Expect = e-164 Identities = 244/436 (55%), Positives = 321/436 (73%), Gaps = 4/436 (0%) Frame = +1 Query: 1 ERVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKD 168 +RVY+KL +T H +GG K ++ Y+ E+PIW+LFFALGV+SD++V++LID D++D Sbjct: 279 KRVYIKLTETLKLEHIKGGEKALSVYIL--AEMPIWVLFFALGVSSDREVVNLIDVDIED 336 Query: 169 NTILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLR 348 TI+N L ASI++A++ +DFRK KA + D L + + P++S ++CI LFPNL Sbjct: 337 TTIVNILVASIHEADKNCEDFRKGKKALAYV-DRLIKNCKFPPQESVEECINAYLFPNLS 395 Query: 349 GFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMI 528 GF +KAR+LGYMVKCLL ++ GRRKVD+RD FR+KR++ RRM+ Sbjct: 396 GFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMV 455 Query: 529 KALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANP 708 KA+QRDL+GDR + PIE Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA L+R NP Sbjct: 456 KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 515 Query: 709 LQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTH 888 LQM ADMR+SRQQV+YTG+VGDARYPHPSHWGKLC+++TPDGENCGLVKNLAS GLVST Sbjct: 516 LQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTI 575 Query: 889 VQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEV 1068 + L+ L + GM++LVD+ L K KV +G+WVGVC+D+ V+ +R KRR EV Sbjct: 576 ILKPFLETLFRCGMQKLVDDCSTSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEV 635 Query: 1069 HYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXX 1248 +QVE+ +D+ EVRIF+D GR++RPLLVV N+K IK LK DY FQSLLD+ Sbjct: 636 PHQVEVKRDELQGEVRIFSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIG 695 Query: 1249 XXXXXNCYTAWGVKYL 1296 +C TAWGV+Y+ Sbjct: 696 PEEEEDCRTAWGVEYI 711 >ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Vitis vinifera] ref|XP_010648748.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Vitis vinifera] Length = 1198 Score = 503 bits (1295), Expect = e-164 Identities = 256/446 (57%), Positives = 323/446 (72%), Gaps = 9/446 (2%) Frame = +1 Query: 1 ERVYVKLV---DTHFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKDN 171 +RVYVKL D + RGG KV+T Y F+S EIPIW+LFFALG +SDK+V+DLID ++ D Sbjct: 262 KRVYVKLEPPKDENNRGGEKVLTVY-FSSTEIPIWILFFALGASSDKEVVDLIDFNIDDA 320 Query: 172 TILNTLFASIYDA----EQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFP 339 I N L ASI++A E+K FR+ G A D L + + P +S ++CI + LFP Sbjct: 321 GISNILVASIHEADREAEKKGMYFRRQGNAIS-FVDKLVKSCKFPPGESIQECISKYLFP 379 Query: 340 NLRGFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVR 519 N G +KAR+LGYMVKCLL+AYTGRRK D+RD FR+KR++ R Sbjct: 380 NFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAER 439 Query: 520 RMIKALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKR 699 RM+KA+QR+L+GDR L PIE Y+DA+++TNGLSRAFSTG W HP+KRMERISGVVA L+R Sbjct: 440 RMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRR 499 Query: 700 ANPLQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLV 879 NPLQM ADMR++RQQV YTG+VGDARYPHPSHWGK+C+++TPDGENCGLVKNLA TGLV Sbjct: 500 TNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLV 559 Query: 880 STHVQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRS 1059 ST V L+D L GME+LVD+ L K+KVF +GDWVGVC+D S V ++R+KRR Sbjct: 560 STEVLDPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRH 619 Query: 1060 KEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXX 1239 KE+ QVEI +D++ EVRIF+DAGR++RPLLVVEN+K +K K D++FQSLLD Sbjct: 620 KELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVE 679 Query: 1240 XXXXXXXXNCYTAWGVKYLF--HDEP 1311 +C TAWG+KYL HD+P Sbjct: 680 LIGAEEEEDCSTAWGIKYLLKGHDDP 705 >ref|XP_022012378.1| DNA-directed RNA polymerases IV and V subunit 2-like [Helianthus annuus] ref|XP_022012379.1| DNA-directed RNA polymerases IV and V subunit 2-like [Helianthus annuus] Length = 1200 Score = 503 bits (1295), Expect = e-164 Identities = 249/438 (56%), Positives = 317/438 (72%), Gaps = 5/438 (1%) Frame = +1 Query: 1 ERVYVKLVDT-----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVK 165 +RVYVKL DT GG +VI Y + ++PIW+LFFALGV+SDK+V+DLIDAD+ Sbjct: 263 KRVYVKLTDTPNNIEDIVGGAQVINVYTLSLEDMPIWILFFALGVSSDKEVVDLIDADIT 322 Query: 166 DNTILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNL 345 D I+N L ASI+ A++ FRK G+ E D L +K + PK+S ++CIE LFPN+ Sbjct: 323 DGNIVNILIASIHAADETCDGFRK-GRNALEFVDKLLKKSSFPPKESVEECIENYLFPNI 381 Query: 346 RGFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRM 525 GF+RKARYLGYMVKCLLE Y G+RKVD++D FR+KR++ V+RM Sbjct: 382 IGFSRKARYLGYMVKCLLEGYAGQRKVDNKDDFRNKRLELAGELIERELNIHLRHAVKRM 441 Query: 526 IKALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRAN 705 +K+LQRDL+ DR ++PIE Y D+A++TNGLSRAFSTG W HP K ME+ SGVVA L+RAN Sbjct: 442 VKSLQRDLYPDRVVHPIEQYFDSAIITNGLSRAFSTGTWSHPLKYMEKTSGVVAMLRRAN 501 Query: 706 PLQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVST 885 PLQM++DMRR+RQQV Y G+ GDARYPHPSHWGK+CY++TPDGENCGL+KNLA+T LVST Sbjct: 502 PLQMISDMRRTRQQVLYAGKAGDARYPHPSHWGKICYLSTPDGENCGLIKNLAATALVST 561 Query: 886 HVQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKE 1065 V+ +L D L+ GME+LVD+ L K+F NGDWVG C D+ S VA+ RSKRR K+ Sbjct: 562 TVREDLSDALLACGMEKLVDDTSTSLSGMDKIFVNGDWVGTCKDSASFVAEFRSKRRRKQ 621 Query: 1066 VHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXX 1245 V +QVEI +D K++EVRIF DAGR++RPLLVV+N+ IK LK YSFQ LLD+ Sbjct: 622 VPHQVEIKRDAKHKEVRIFCDAGRILRPLLVVKNLHKIKLLKGGGYSFQDLLDNGVVELI 681 Query: 1246 XXXXXXNCYTAWGVKYLF 1299 +C TAW +KYLF Sbjct: 682 GTEEEEDCCTAWDIKYLF 699 >emb|CBI21137.3| unnamed protein product, partial [Vitis vinifera] Length = 1220 Score = 503 bits (1295), Expect = e-164 Identities = 256/446 (57%), Positives = 323/446 (72%), Gaps = 9/446 (2%) Frame = +1 Query: 1 ERVYVKLV---DTHFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKDN 171 +RVYVKL D + RGG KV+T Y F+S EIPIW+LFFALG +SDK+V+DLID ++ D Sbjct: 298 KRVYVKLEPPKDENNRGGEKVLTVY-FSSTEIPIWILFFALGASSDKEVVDLIDFNIDDA 356 Query: 172 TILNTLFASIYDA----EQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFP 339 I N L ASI++A E+K FR+ G A D L + + P +S ++CI + LFP Sbjct: 357 GISNILVASIHEADREAEKKGMYFRRQGNAIS-FVDKLVKSCKFPPGESIQECISKYLFP 415 Query: 340 NLRGFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVR 519 N G +KAR+LGYMVKCLL+AYTGRRK D+RD FR+KR++ R Sbjct: 416 NFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELLERELRVHIRHAER 475 Query: 520 RMIKALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKR 699 RM+KA+QR+L+GDR L PIE Y+DA+++TNGLSRAFSTG W HP+KRMERISGVVA L+R Sbjct: 476 RMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKRMERISGVVATLRR 535 Query: 700 ANPLQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLV 879 NPLQM ADMR++RQQV YTG+VGDARYPHPSHWGK+C+++TPDGENCGLVKNLA TGLV Sbjct: 536 TNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAITGLV 595 Query: 880 STHVQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRS 1059 ST V L+D L GME+LVD+ L K+KVF +GDWVGVC+D S V ++R+KRR Sbjct: 596 STEVLDPLVDKLFDCGMEKLVDDTSTKLSGKNKVFLDGDWVGVCEDPISFVVELRTKRRH 655 Query: 1060 KEVHYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXX 1239 KE+ QVEI +D++ EVRIF+DAGR++RPLLVVEN+K +K K D++FQSLLD Sbjct: 656 KELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGDDFTFQSLLDKGIVE 715 Query: 1240 XXXXXXXXNCYTAWGVKYLF--HDEP 1311 +C TAWG+KYL HD+P Sbjct: 716 LIGAEEEEDCSTAWGIKYLLKGHDDP 741 >ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Solanum tuberosum] ref|XP_015159439.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Solanum tuberosum] Length = 1219 Score = 502 bits (1293), Expect = e-164 Identities = 249/439 (56%), Positives = 321/439 (73%), Gaps = 8/439 (1%) Frame = +1 Query: 4 RVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKDN 171 RVY+KL +T H +G K ++ Y E+PIW+LFFALGV+SD++++DLID D+KD Sbjct: 284 RVYLKLTETLKHEHIKGEAKALSVYFL--AEMPIWVLFFALGVSSDREIVDLIDVDIKDT 341 Query: 172 TILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLRG 351 I+N L ASI+DA++ +DFRK KA + D L + + P++S ++CI+E LFPNL G Sbjct: 342 NIINILVASIHDADKNCEDFRKGKKALAYV-DRLIKSCKFPPQESVEECIKEYLFPNLSG 400 Query: 352 FNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMIK 531 +KAR+LGYMVKCLL +Y GRRKVD+RD FR+KR+D RRM+K Sbjct: 401 LKQKARFLGYMVKCLLLSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVK 460 Query: 532 ALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANPL 711 ALQRDL GDR + P+E Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA L+R NPL Sbjct: 461 ALQRDLCGDRQVQPLEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPL 520 Query: 712 QMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTHV 891 QM AD+R++RQQV+YTG+VGDARYPHPSHWGK+C+++TPDGENCGLVKNLAS GLVST V Sbjct: 521 QMTADLRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTV 580 Query: 892 QVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEVH 1071 LL+ L + GM++LVD+ L K KV +GDWVGVC+D+ V+ +R KRR EV Sbjct: 581 LKPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVP 640 Query: 1072 YQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKE----RDYSFQSLLDHXXXX 1239 +QVE+ +D++ EVRIF+DAGR+MRPLLVV N+KNIK LK+ DY FQ+LLD Sbjct: 641 HQVEVKRDEQQDEVRIFSDAGRIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIE 700 Query: 1240 XXXXXXXXNCYTAWGVKYL 1296 +C TAWGV+YL Sbjct: 701 LIGPEEEEDCRTAWGVEYL 719 >ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Solanum tuberosum] Length = 1217 Score = 502 bits (1292), Expect = e-163 Identities = 244/436 (55%), Positives = 322/436 (73%), Gaps = 4/436 (0%) Frame = +1 Query: 1 ERVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKD 168 +RVY+KL +T H +GG K ++ Y+ E+PIW+LFFALGV+SD++V++LID D++D Sbjct: 285 KRVYIKLTETLKLEHIKGGEKALSVYIL--AEMPIWVLFFALGVSSDREVVNLIDVDIED 342 Query: 169 NTILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLR 348 TI+N L ASI++A++ +DFRK KA + D L + + P++S ++CI LFPNL Sbjct: 343 TTIVNILVASIHEADKNCEDFRKGKKALAYV-DRLIKNCKFPPQESVEECINAYLFPNLS 401 Query: 349 GFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMI 528 GF +KAR+LGYMVKCLL ++ GRRKVD+RD FR+KR++ RRM+ Sbjct: 402 GFKQKARFLGYMVKCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMV 461 Query: 529 KALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANP 708 KA+QRDL+GDR + PIE Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA L+R NP Sbjct: 462 KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 521 Query: 709 LQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTH 888 LQM ADMR+SRQQV+YTG+VGDARYPHPSHWGKLC+++TPDGENCGLVKNLAS GLVST Sbjct: 522 LQMTADMRKSRQQVTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTI 581 Query: 889 VQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEV 1068 + L+ L + GM++LVD+ L K KV +G+WVGVC+D+ V+ +R KRR EV Sbjct: 582 ILKPFLETLFRCGMQKLVDDCATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEV 641 Query: 1069 HYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXX 1248 +QVE+ +D+ EVRIF+D+GR++RPLLVV N+K IK LK DY FQSLLD+ Sbjct: 642 PHQVEVKRDELQGEVRIFSDSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIG 701 Query: 1249 XXXXXNCYTAWGVKYL 1296 +C TAWGV+Y+ Sbjct: 702 PEEEEDCRTAWGVEYI 717 >gb|OTG06531.1| putative nuclear RNA polymerase D2A [Helianthus annuus] Length = 1169 Score = 500 bits (1288), Expect = e-163 Identities = 249/437 (56%), Positives = 314/437 (71%), Gaps = 4/437 (0%) Frame = +1 Query: 1 ERVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKD 168 +RVYVKL DT GG +VIT Y+ + +++PIW+LFFALGV+SDKQV+DLIDAD+ D Sbjct: 233 KRVYVKLTDTPKIEDIVGGAQVITVYVLSLMDMPIWILFFALGVSSDKQVVDLIDADITD 292 Query: 169 NTILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLR 348 I+N L ASI+ A+Q+ +FRK A + LK+ + PK+S K+CIE LFPN+ Sbjct: 293 GNIVNILIASIHAADQECDEFRKGRNALNYVEKLLKES-RFPPKESVKECIENYLFPNIV 351 Query: 349 GFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMI 528 GF+RKARYLGYMVKCLLE Y GRRK ++D FR+KR++ +RM+ Sbjct: 352 GFSRKARYLGYMVKCLLEGYVGRRKTCNKDDFRNKRLELAGELLERELKIHLKHAEKRMV 411 Query: 529 KALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANP 708 K++QRDL+ DRT+ PIE Y DAA++TNGLSRAFSTG W HP K ME+ SGVVA L+RANP Sbjct: 412 KSMQRDLYPDRTVQPIEHYFDAAIITNGLSRAFSTGSWSHPLKNMEKTSGVVATLRRANP 471 Query: 709 LQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTH 888 LQM+ADMRR+RQQV Y G+ GDARYPHPSHWGK+CY++TPDGENCGLVKNLA T LVST Sbjct: 472 LQMIADMRRTRQQVLYAGKAGDARYPHPSHWGKICYLSTPDGENCGLVKNLAGTALVSTT 531 Query: 889 VQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEV 1068 V+ D+L GME+LVD+ L ++F NGDWVG C ++ S VA+ RSKRRSK+V Sbjct: 532 VREQFSDILTACGMEKLVDDTSTSLSGMDRIFVNGDWVGNCKNSASFVAEFRSKRRSKQV 591 Query: 1069 HYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXX 1248 QVEI +D ++EVRIF+DAGR++RPLLVV+N+ IK LK YSFQ LLD+ Sbjct: 592 PPQVEIKRDANHKEVRIFSDAGRILRPLLVVKNLHKIKLLKGGGYSFQDLLDNGVVELIG 651 Query: 1249 XXXXXNCYTAWGVKYLF 1299 +C TAW +KYLF Sbjct: 652 PEEEEDCCTAWDIKYLF 668 >ref|XP_019252729.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Nicotiana attenuata] ref|XP_019252735.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Nicotiana attenuata] ref|XP_019252739.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like [Nicotiana attenuata] gb|OIT08688.1| dna-directed rna polymerases iv and v subunit 2 [Nicotiana attenuata] Length = 1218 Score = 501 bits (1291), Expect = e-163 Identities = 245/435 (56%), Positives = 323/435 (74%), Gaps = 4/435 (0%) Frame = +1 Query: 4 RVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKDN 171 RVY+KL +T H +G K +T Y F+ E+PIW+LFFALGV+SD++V++LID D++D Sbjct: 286 RVYIKLAETLKLEHIKGVEKALTVY-FSVAEMPIWILFFALGVSSDREVVNLIDVDIEDT 344 Query: 172 TILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLRG 351 I+N L ASI+DA++K +DFRK KA + D L + + P++S ++CI+ LFPNL G Sbjct: 345 NIVNILVASIHDADKKCEDFRKGKKALAYV-DRLIKGCRFPPQESVEECIQHYLFPNLSG 403 Query: 352 FNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMIK 531 +KAR+LGYMVK LL A+ GRRKVD+RD FR+KR++ RRM+K Sbjct: 404 LKQKARFLGYMVKSLLHAFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMLK 463 Query: 532 ALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANPL 711 A+QRDL+GDR + PIE Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA ++R NPL Sbjct: 464 AMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATIRRTNPL 523 Query: 712 QMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTHV 891 QM ADMR++RQQV+YTG+VGDARYPHPSHWGK+C+++TPDGENCGLVKNLAS GLVST + Sbjct: 524 QMTADMRKTRQQVTYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTI 583 Query: 892 QVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEVH 1071 LL++L + GM++LVD+ L K KV NGDWVG+C+D+ V+ +R KRR E+ Sbjct: 584 LKPLLEMLYRCGMQKLVDDSATSLHGKQKVLLNGDWVGICEDSALFVSKLRRKRRRNELP 643 Query: 1072 YQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXXX 1251 +QVE+ +D++ EVRIF+DAGR++RPLLVV N+K IK LK DY FQSLLD+ Sbjct: 644 HQVEVKRDEQQGEVRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGP 703 Query: 1252 XXXXNCYTAWGVKYL 1296 +C TAWGV+YL Sbjct: 704 EEEEDCRTAWGVEYL 718 >gb|PHU23638.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum chinense] Length = 1217 Score = 501 bits (1290), Expect = e-163 Identities = 245/436 (56%), Positives = 322/436 (73%), Gaps = 4/436 (0%) Frame = +1 Query: 1 ERVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKD 168 +RVYVKL +T H +GG K ++ Y+ E+PIW+LFFALGV+SDK+V++LID D++D Sbjct: 285 KRVYVKLTETLKLEHIKGGEKALSVYIL--AEMPIWILFFALGVSSDKEVVNLIDVDIED 342 Query: 169 NTILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLR 348 I+N L ASI++A++ +DFRK KA D L + + P++S ++CI+ LFPNL Sbjct: 343 TRIVNILVASIHEADKNCEDFRKGKKALA-FVDRLIKSCKFPPQESVEECIKAYLFPNLS 401 Query: 349 GFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMI 528 GF +KAR+LGYMVKCL+ ++ GRRKV++RD FR+KR++ RRM+ Sbjct: 402 GFKQKARFLGYMVKCLVHSFIGRRKVENRDDFRNKRLELAGELLERELRAHIKHAERRMV 461 Query: 529 KALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANP 708 KA+QRDL+GDR + PIE Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA L+R NP Sbjct: 462 KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 521 Query: 709 LQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTH 888 LQM ADMR++RQQV+YTGRVGDARYPHPSHWGK+C+++TPDGENCGLVKNLAS GLVST Sbjct: 522 LQMTADMRKTRQQVTYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTI 581 Query: 889 VQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEV 1068 V LL+ L + GM++LVD+ L K KV +G+WVGVC+D+ V+ +R KRR EV Sbjct: 582 VLKPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEV 641 Query: 1069 HYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXX 1248 +QVE+ +D+ EVRIF+DAGR++RPLLVV N+K IK LK DY FQSLLD+ Sbjct: 642 PHQVEVKRDELQGEVRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIG 701 Query: 1249 XXXXXNCYTAWGVKYL 1296 +C TAWGV+Y+ Sbjct: 702 PEEEEDCRTAWGVEYI 717 >gb|PHT87914.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum annuum] Length = 1217 Score = 501 bits (1290), Expect = e-163 Identities = 245/436 (56%), Positives = 322/436 (73%), Gaps = 4/436 (0%) Frame = +1 Query: 1 ERVYVKLVDT----HFRGGGKVITAYLFNSVEIPIWMLFFALGVTSDKQVIDLIDADVKD 168 +RVYVKL +T H +GG K ++ Y+ E+PIW+LFFALGV+SDK+V++LID D++D Sbjct: 285 KRVYVKLTETLKLEHIKGGEKALSVYIL--AEMPIWILFFALGVSSDKEVVNLIDVDIED 342 Query: 169 NTILNTLFASIYDAEQKSKDFRKDGKAFKELTDALKQKWMYAPKQSYKDCIEEILFPNLR 348 I+N L ASI++A++ +DFRK KA D L + + P++S ++CI+ LFPNL Sbjct: 343 TRIVNILVASIHEADKNCEDFRKGKKALA-FVDRLIKSCKFPPQESVEECIKAYLFPNLS 401 Query: 349 GFNRKARYLGYMVKCLLEAYTGRRKVDDRDSFRSKRVDXXXXXXXXXXXXXXXXXVRRMI 528 GF +KAR+LGYMVKCL+ ++ GRRKV++RD FR+KR++ RRM+ Sbjct: 402 GFKQKARFLGYMVKCLVHSFIGRRKVENRDDFRNKRLELAGELLERELRAHIKHAERRMV 461 Query: 529 KALQRDLWGDRTLNPIELYVDAAVVTNGLSRAFSTGGWCHPYKRMERISGVVAQLKRANP 708 KA+QRDL+GDR + PIE Y+DA+++TNGLSRAFSTG WCHPYKRMER+SGVVA L+R NP Sbjct: 462 KAMQRDLYGDRQVQPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNP 521 Query: 709 LQMMADMRRSRQQVSYTGRVGDARYPHPSHWGKLCYMTTPDGENCGLVKNLASTGLVSTH 888 LQM ADMR++RQQV+YTGRVGDARYPHPSHWGK+C+++TPDGENCGLVKNLAS GLVST Sbjct: 522 LQMTADMRKTRQQVTYTGRVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTI 581 Query: 889 VQVNLLDVLIQSGMEELVDNMPILLGRKHKVFFNGDWVGVCDDATSLVADIRSKRRSKEV 1068 V LL+ L + GM++LVD+ L K KV +G+WVGVC+D+ V+ +R KRR EV Sbjct: 582 VLKPLLETLFRCGMQKLVDDSATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEV 641 Query: 1069 HYQVEIVQDDKNREVRIFTDAGRLMRPLLVVENIKNIKFLKERDYSFQSLLDHXXXXXXX 1248 +QVE+ +D+ EVRIF+DAGR++RPLLVV N+K IK LK DY FQSLLD+ Sbjct: 642 PHQVEVKRDELQGEVRIFSDAGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIG 701 Query: 1249 XXXXXNCYTAWGVKYL 1296 +C TAWGV+Y+ Sbjct: 702 PEEEEDCRTAWGVEYI 717