BLASTX nr result

ID: Chrysanthemum21_contig00028323 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00028323
         (610 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_021975391.1| uncharacterized protein LOC110870521 [Helian...    47   8e-07
ref|XP_021971105.1| uncharacterized protein LOC110866060 [Helian...    43   3e-06
ref|XP_021995583.1| uncharacterized protein LOC110892742 [Helian...    43   3e-06

>ref|XP_021975391.1| uncharacterized protein LOC110870521 [Helianthus annuus]
          Length = 1430

 Score = 47.4 bits (111), Expect(2) = 8e-07
 Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
 Frame = +1

Query: 358 SSGTSRRLCFGGCNQLCRHCRATFWLEEKLAASRAEVH--YHRCCQGVVLQCPP 513
           SS  S  L  G C  +C HC A FW +E++ A+    H  Y++CC+G  ++ PP
Sbjct: 18  SSDRSLYLDNGDCTNICEHCGAFFWFDERIVATSTARHLRYNQCCKGGRVKFPP 71



 Score = 33.5 bits (75), Expect(2) = 8e-07
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = +3

Query: 489 GGRVAMPTVHTYPSYVQQLYSDRHFMHNIRAYNQMFLITS 608
           GGRV  P  +   S    L+    F+ NIRAYN MF +TS
Sbjct: 64  GGRVKFPPPNHPLSAFVDLFGRPDFLANIRAYNSMFSMTS 103


>ref|XP_021971105.1| uncharacterized protein LOC110866060 [Helianthus annuus]
          Length = 1673

 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +3

Query: 525 PSYVQQLYSDRHFMHNIRAYNQMFLITS 608
           P Y+++LYS  HFM NIRAYN MF +TS
Sbjct: 138 PVYIKELYSMAHFMENIRAYNSMFSMTS 165



 Score = 36.2 bits (82), Expect(2) = 3e-06
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +1

Query: 388 GGCNQLCRHCRATFWLEEKLAAS--RAEVHYHRCC-QGVV-LQCPPSIPIH 528
           G C  +C +C A FW EE+L +S  +    Y+ CC +G V +  P   P++
Sbjct: 90  GDCTNVCEYCGALFWHEERLKSSPQKNRPRYNMCCREGTVRIDFPREPPVY 140


>ref|XP_021995583.1| uncharacterized protein LOC110892742 [Helianthus annuus]
          Length = 1506

 Score = 42.7 bits (99), Expect(2) = 3e-06
 Identities = 18/28 (64%), Positives = 22/28 (78%)
 Frame = +3

Query: 525 PSYVQQLYSDRHFMHNIRAYNQMFLITS 608
           P Y+++LYS  HFM NIRAYN MF +TS
Sbjct: 138 PVYIKELYSMAHFMENIRAYNSMFSMTS 165



 Score = 36.2 bits (82), Expect(2) = 3e-06
 Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
 Frame = +1

Query: 388 GGCNQLCRHCRATFWLEEKLAAS--RAEVHYHRCC-QGVV-LQCPPSIPIH 528
           G C  +C +C A FW EE+L +S  +    Y+ CC +G V +  P   P++
Sbjct: 90  GDCTNVCEYCGALFWHEERLKSSPQKNRPRYNMCCREGTVRIDFPREPPVY 140


Top