BLASTX nr result

ID: Chrysanthemum21_contig00027944 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00027944
         (682 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY95982.1| hypothetical protein LSAT_9X38801 [Lactuca sativa]      84   6e-16

>gb|PLY95982.1| hypothetical protein LSAT_9X38801 [Lactuca sativa]
          Length = 216

 Score = 83.6 bits (205), Expect = 6e-16
 Identities = 54/126 (42%), Positives = 73/126 (57%), Gaps = 6/126 (4%)
 Frame = +2

Query: 2   PLKPVCHIDYLYLPVVQNKETTYMAGLSLEFQFINRNKLIPISYDS-LNITIYYLPSPNE 178
           PLKPVC+I ++ +P+   K  T     +L  +FINRN LI +SYDS LNI++YY+ S N 
Sbjct: 86  PLKPVCNISHI-IPLDGAK--TENESFNLVLEFINRNPLISVSYDSFLNISVYYISSSN- 141

Query: 179 IIYFANSTAPGFNQPTGNSNRREIYMPAPALSSLLRLQGK-----LRVNLEFDARFHCRF 343
           + YFA +TAPGF+Q         +++PAP  S L  +Q       L VNL+F   F C  
Sbjct: 142 VSYFAETTAPGFDQQNLKQTEVTVHIPAPESSQLSEMQNTSNPIGLLVNLDFIVGFRC-I 200

Query: 344 LCKHIR 361
            CK  R
Sbjct: 201 SCKEKR 206


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