BLASTX nr result

ID: Chrysanthemum21_contig00027907 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00027907
         (376 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI06306.1| hypothetical protein Ccrd_015349 [Cynara carduncu...    96   1e-20
ref|XP_022025723.1| protein MODIFIER OF SNC1 1-like [Helianthus ...    89   5e-18

>gb|KVI06306.1| hypothetical protein Ccrd_015349 [Cynara cardunculus var. scolymus]
          Length = 1500

 Score = 96.3 bits (238), Expect = 1e-20
 Identities = 68/149 (45%), Positives = 77/149 (51%), Gaps = 37/149 (24%)
 Frame = +3

Query: 39   KRVGHKQKQSVQDVESSVDK-------STMKAPASADAKNSGNNLTISSEAVPKQE---P 188
            KR  H+QKQSVQ VES  DK        T+K  A A  KNSGNN+ +S E VP Q+   P
Sbjct: 886  KRANHRQKQSVQVVESLADKPTLSGTGETLKGSAGAAMKNSGNNVVVSGEDVPSQQSNLP 945

Query: 189  VLSSIMSEQTQPXXXXXXXXXXXHKLDDAS---------------------ESGKPESPK 305
              S+I+SE TQ            HKLDDAS                     ESGKPES +
Sbjct: 946  NNSNILSESTQQRKRNNKSSKTKHKLDDASLPATVSSSSASREGDLGKLSTESGKPESSQ 1005

Query: 306  SDL------VTDSKDAPQSKVEQISSLPS 374
             DL      VTDSKDA QS +E ISSLPS
Sbjct: 1006 FDLDPSIVLVTDSKDAMQSNLEHISSLPS 1034


>ref|XP_022025723.1| protein MODIFIER OF SNC1 1-like [Helianthus annuus]
 gb|OTF86244.1| putative protein MODIFIER OF SNC1 1 [Helianthus annuus]
          Length = 1241

 Score = 89.0 bits (219), Expect = 5e-18
 Identities = 64/146 (43%), Positives = 76/146 (52%), Gaps = 23/146 (15%)
 Frame = +3

Query: 6    TDVETKTDQ--------KQKRVGHKQKQSVQDVESSVDKSTMKAPASADAKNSGNNLTIS 161
            TD E+K           +QKR  HKQK SVQ VE+ VDKST+   A    KN      + 
Sbjct: 730  TDAESKAASLGNDGGVHRQKRAIHKQKPSVQTVEALVDKSTLSGTADTVIKN-----PVL 784

Query: 162  SEAVPKQEPVL---SSIMSEQTQPXXXXXXXXXXXHKLDDASES-----GKPES------ 299
             EAV  QEP L   S+I+SE TQP           HK+DDAS S      KPES      
Sbjct: 785  GEAVSSQEPTLPTNSNIVSESTQPKKRTNKSSKNKHKVDDASASREVNLSKPESQTDLNQ 844

Query: 300  -PKSDLVTDSKDAPQSKVEQISSLPS 374
             P +  +TDSKD  QS +EQ+SSLPS
Sbjct: 845  HPSAVSMTDSKDTKQSNLEQVSSLPS 870


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