BLASTX nr result

ID: Chrysanthemum21_contig00027832 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00027832
         (369 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY69050.1| hypothetical protein LSAT_9X89160 [Lactuca sativa]      54   8e-06

>gb|PLY69050.1| hypothetical protein LSAT_9X89160 [Lactuca sativa]
          Length = 525

 Score = 53.9 bits (128), Expect = 8e-06
 Identities = 31/52 (59%), Positives = 40/52 (76%), Gaps = 5/52 (9%)
 Frame = -3

Query: 142 QMGSKRLDYLIEASSGLHFSLCNMNGRIQARDSRL-----TSSVPENMQKQP 2
           +MGSK ++YLIEASSG HFS  +MNG +QAR+S+L     T+SV EN+ KQP
Sbjct: 52  KMGSKPVEYLIEASSGAHFSGFHMNG-MQARNSQLQEGQATTSVTENVHKQP 102


Top