BLASTX nr result

ID: Chrysanthemum21_contig00027816 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00027816
         (520 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY75118.1| hypothetical protein LSAT_1X130720 [Lactuca sativa]     64   3e-09

>gb|PLY75118.1| hypothetical protein LSAT_1X130720 [Lactuca sativa]
          Length = 252

 Score = 64.3 bits (155), Expect = 3e-09
 Identities = 49/172 (28%), Positives = 84/172 (48%), Gaps = 16/172 (9%)
 Frame = -3

Query: 479 DANLENMVVPSSSADENESQTSTKQPKRLNKRNHPAEIQQIELPPKGNECLASNNKEANG 300
           D ++++ V+PSSSA+E +S++  + P   N R     + QI    KG   +  + +    
Sbjct: 4   DHDVDHTVIPSSSAEE-DSRSRNQSPMIRNSRKRKQPVDQIPESEKGE--VQEDMECQQE 60

Query: 299 IGVVKKVWKREEEITLLNALK---ITKDLNELHKLVQGSISVTLG--QVKNKVRRLHEKF 135
             V+KK+W  ++EITLL  LK      D+N L+++V+  +       QV  KV  L   F
Sbjct: 61  TSVIKKLWSEKDEITLLETLKQISNKSDMNMLYEIVKPYLEEEFSEDQVSEKVSWLKTNF 120

Query: 134 NKGIIHD---------DSEYNKLFAEIWGDDVTPSA--PVLNFEDFKHYFPR 12
                 D         D++  +L+ EIWG+  T  A    +  ++F+ ++PR
Sbjct: 121 MNNNSKDALQGTSSSHDAKIRELYKEIWGESETAVAGPREMTIKEFQGHYPR 172


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