BLASTX nr result

ID: Chrysanthemum21_contig00027738 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00027738
         (363 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OAY82885.1| Receptor region, transmembrane domain- and RING d...    54   5e-06
ref|XP_020096571.1| receptor homology region, transmembrane doma...    54   5e-06
ref|XP_020096562.1| receptor homology region, transmembrane doma...    54   5e-06

>gb|OAY82885.1| Receptor region, transmembrane domain- and RING domain-containing
           protein 1 [Ananas comosus]
          Length = 372

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = +2

Query: 227 KMFKCCWFSVMCLMMMMGGYGVVANVVLMGNNLTLSFEDIEANFA 361
           K +  C F ++ ++ MM G G  ANVVLMGNN+TLSF+D+EANFA
Sbjct: 10  KRYLLCSFVIVAVIYMMAGLGA-ANVVLMGNNVTLSFDDVEANFA 53


>ref|XP_020096571.1| receptor homology region, transmembrane domain- and RING
           domain-containing protein 1-like isoform X2 [Ananas
           comosus]
          Length = 454

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = +2

Query: 227 KMFKCCWFSVMCLMMMMGGYGVVANVVLMGNNLTLSFEDIEANFA 361
           K +  C F ++ ++ MM G G  ANVVLMGNN+TLSF+D+EANFA
Sbjct: 10  KRYLLCSFVIVAVIYMMAGLGA-ANVVLMGNNVTLSFDDVEANFA 53


>ref|XP_020096562.1| receptor homology region, transmembrane domain- and RING
           domain-containing protein 1-like isoform X1 [Ananas
           comosus]
          Length = 456

 Score = 54.3 bits (129), Expect = 5e-06
 Identities = 26/45 (57%), Positives = 34/45 (75%)
 Frame = +2

Query: 227 KMFKCCWFSVMCLMMMMGGYGVVANVVLMGNNLTLSFEDIEANFA 361
           K +  C F ++ ++ MM G G  ANVVLMGNN+TLSF+D+EANFA
Sbjct: 10  KRYLLCSFVIVAVIYMMAGLGA-ANVVLMGNNVTLSFDDVEANFA 53


Top