BLASTX nr result

ID: Chrysanthemum21_contig00027675 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00027675
         (621 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022007692.1| replication protein A 70 kDa DNA-binding sub...    55   7e-06

>ref|XP_022007692.1| replication protein A 70 kDa DNA-binding subunit C-like [Helianthus
           annuus]
          Length = 206

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 36/116 (31%), Positives = 48/116 (41%), Gaps = 42/116 (36%)
 Frame = +2

Query: 323 STGTILVMLCRIWDVNATNGRYLSTDFIISDAKVAFNHYIS----------------CYC 454
           STG I VM+CR WDV   NGRY+STD+++SD K    HY +                 Y 
Sbjct: 27  STGPITVMVCRKWDVTNVNGRYMSTDYVVSDVKGGMIHYTARNNIAHYFFDKLKEGGVYL 86

Query: 455 AK--------------------------TIRKSLVKSEGFVRYPFQLVDFDNLEPS 544
            K                          T+++    S  F  YPF L  F++LEP+
Sbjct: 87  LKGFTVQRTDQYRILKDSPFVIWLNGSTTVKRVDDTSGSFTHYPFLLTAFEDLEPT 142


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