BLASTX nr result
ID: Chrysanthemum21_contig00027372
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00027372
(713 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_023767066.1| DNA mismatch repair protein MSH2 [Lactuca sa... 65 1e-14
ref|XP_011009801.1| PREDICTED: DNA mismatch repair protein MSH2 ... 65 3e-11
ref|XP_002317931.1| muts homolog 2 family protein [Populus trich... 65 8e-11
ref|XP_010265279.1| PREDICTED: DNA mismatch repair protein MSH2 ... 64 1e-10
gb|POF09642.1| dna mismatch repair protein msh2 [Quercus suber] 65 4e-10
ref|XP_023913090.1| DNA mismatch repair protein MSH2 [Quercus su... 65 4e-10
dbj|GAY58073.1| hypothetical protein CUMW_184290 [Citrus unshiu] 64 5e-10
gb|KDO64509.1| hypothetical protein CISIN_1g002306mg [Citrus sin... 64 5e-10
ref|XP_006485749.1| PREDICTED: DNA mismatch repair protein MSH2 ... 64 5e-10
ref|XP_006440914.1| DNA mismatch repair protein MSH2 isoform X1 ... 64 5e-10
ref|XP_022038966.1| DNA mismatch repair protein MSH2 [Helianthus... 62 7e-10
gb|PLY83021.1| hypothetical protein LSAT_5X25080 [Lactuca sativa] 65 7e-10
gb|PON86517.1| DNA mismatch repair protein [Trema orientalis] 66 9e-10
gb|PON62089.1| DNA mismatch repair protein [Parasponia andersonii] 66 9e-10
gb|PNX82595.1| DNA mismatch repair protein msh2-like, partial [T... 65 9e-10
gb|OMO83064.1| hypothetical protein COLO4_22718 [Corchorus olito... 65 1e-09
ref|XP_015883029.1| PREDICTED: DNA mismatch repair protein MSH2 ... 65 1e-09
gb|OMO92001.1| hypothetical protein CCACVL1_06935 [Corchorus cap... 64 2e-09
ref|XP_017973885.1| PREDICTED: DNA mismatch repair protein MSH2 ... 64 2e-09
emb|CDY40146.1| BnaC06g05430D [Brassica napus] 64 2e-09
>ref|XP_023767066.1| DNA mismatch repair protein MSH2 [Lactuca sativa]
Length = 936
Score = 64.7 bits (156), Expect(2) = 1e-14
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
VEPG CDQSFGIHVAEFANFP+SVVSLAREK++ + F
Sbjct: 820 VEPGACDQSFGIHVAEFANFPQSVVSLAREKAAELEDF 857
Score = 43.1 bits (100), Expect(2) = 1e-14
Identities = 17/26 (65%), Positives = 23/26 (88%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKRPSKQ 529
DFSPLS+V+D+ EH V CKRK+PS++
Sbjct: 856 DFSPLSIVSDEPEHMVGCKRKKPSEE 881
>ref|XP_011009801.1| PREDICTED: DNA mismatch repair protein MSH2 [Populus euphratica]
Length = 944
Score = 65.5 bits (158), Expect(2) = 3e-11
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +1
Query: 301 ANLRFMEHSGTMI-PVEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
A++ H TM+ VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ + F
Sbjct: 813 AHIDTSNHKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDF 865
Score = 31.2 bits (69), Expect(2) = 3e-11
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKR 517
DFSP ++++DD KV KRKR
Sbjct: 864 DFSPTAIISDDAREKVGSKRKR 885
>ref|XP_002317931.1| muts homolog 2 family protein [Populus trichocarpa]
gb|PNT09707.1| hypothetical protein POPTR_012G060000v3 [Populus trichocarpa]
Length = 944
Score = 65.5 bits (158), Expect(2) = 8e-11
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +1
Query: 301 ANLRFMEHSGTMI-PVEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
A++ H TM+ VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ + F
Sbjct: 813 AHIDSSNHKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 865
Score = 29.6 bits (65), Expect(2) = 8e-11
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKR 517
DFSP ++++DD +V KRKR
Sbjct: 864 DFSPTAIISDDAREEVGSKRKR 885
>ref|XP_010265279.1| PREDICTED: DNA mismatch repair protein MSH2 [Nelumbo nucifera]
Length = 942
Score = 63.5 bits (153), Expect(2) = 1e-10
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ + F
Sbjct: 826 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 863
Score = 30.8 bits (68), Expect(2) = 1e-10
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKRPS 523
DFSP+ +++DD + +V KRKR S
Sbjct: 862 DFSPVPIISDDAKEEVGSKRKRVS 885
>gb|POF09642.1| dna mismatch repair protein msh2 [Quercus suber]
Length = 1000
Score = 65.5 bits (158), Expect(2) = 4e-10
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +1
Query: 301 ANLRFMEHSGTMI-PVEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
A++ H TM+ VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ + F
Sbjct: 869 AHIDSASHKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 921
Score = 27.3 bits (59), Expect(2) = 4e-10
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKRPSKQ 529
DFSP + + +D + +V KRKR Q
Sbjct: 920 DFSPTATITNDAQKEVGSKRKRECDQ 945
>ref|XP_023913090.1| DNA mismatch repair protein MSH2 [Quercus suber]
Length = 942
Score = 65.5 bits (158), Expect(2) = 4e-10
Identities = 33/53 (62%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +1
Query: 301 ANLRFMEHSGTMI-PVEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
A++ H TM+ VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ + F
Sbjct: 811 AHIDSASHKLTMLYKVEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDF 863
Score = 27.3 bits (59), Expect(2) = 4e-10
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKRPSKQ 529
DFSP + + +D + +V KRKR Q
Sbjct: 862 DFSPTATITNDAQKEVGSKRKRECDQ 887
>dbj|GAY58073.1| hypothetical protein CUMW_184290 [Citrus unshiu]
Length = 938
Score = 64.3 bits (155), Expect(2) = 5e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGFLTS 465
VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ + F S
Sbjct: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
Score = 28.1 bits (61), Expect(2) = 5e-10
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKRPS 523
DF+P +V++DD + +V KRKR S
Sbjct: 858 DFTPSAVISDDAKIEVGSKRKRIS 881
>gb|KDO64509.1| hypothetical protein CISIN_1g002306mg [Citrus sinensis]
Length = 938
Score = 64.3 bits (155), Expect(2) = 5e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGFLTS 465
VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ + F S
Sbjct: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
Score = 28.1 bits (61), Expect(2) = 5e-10
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKRPS 523
DF+P +V++DD + +V KRKR S
Sbjct: 858 DFTPSAVISDDAKIEVGSKRKRIS 881
>ref|XP_006485749.1| PREDICTED: DNA mismatch repair protein MSH2 [Citrus sinensis]
Length = 938
Score = 64.3 bits (155), Expect(2) = 5e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGFLTS 465
VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ + F S
Sbjct: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
Score = 28.1 bits (61), Expect(2) = 5e-10
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKRPS 523
DF+P +V++DD + +V KRKR S
Sbjct: 858 DFTPSAVISDDAKIEVGSKRKRIS 881
>ref|XP_006440914.1| DNA mismatch repair protein MSH2 isoform X1 [Citrus clementina]
gb|ESR54154.1| hypothetical protein CICLE_v10018746mg [Citrus clementina]
Length = 938
Score = 64.3 bits (155), Expect(2) = 5e-10
Identities = 30/41 (73%), Positives = 35/41 (85%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGFLTS 465
VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ + F S
Sbjct: 822 VEPGACDQSFGIHVAEFANFPESVVTLAREKAAELEDFTPS 862
Score = 28.1 bits (61), Expect(2) = 5e-10
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKRPS 523
DF+P +V++DD + +V KRKR S
Sbjct: 858 DFTPSAVISDDAKIEVGSKRKRIS 881
>ref|XP_022038966.1| DNA mismatch repair protein MSH2 [Helianthus annuus]
gb|OTG26006.1| putative MUTS-like protein [Helianthus annuus]
Length = 935
Score = 61.6 bits (148), Expect(2) = 7e-10
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
VE G CDQSFGIHVAEFANFP+SVVSLAREK++ + F
Sbjct: 819 VEAGACDQSFGIHVAEFANFPESVVSLAREKAAELEDF 856
Score = 30.4 bits (67), Expect(2) = 7e-10
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKRPSK 526
DF+P+S+V+++ E + KRK+PS+
Sbjct: 855 DFTPVSIVSNEAEQEAGRKRKKPSE 879
>gb|PLY83021.1| hypothetical protein LSAT_5X25080 [Lactuca sativa]
Length = 928
Score = 64.7 bits (156), Expect(2) = 7e-10
Identities = 30/38 (78%), Positives = 34/38 (89%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
VEPG CDQSFGIHVAEFANFP+SVVSLAREK++ + F
Sbjct: 820 VEPGACDQSFGIHVAEFANFPQSVVSLAREKAAELEDF 857
Score = 27.3 bits (59), Expect(2) = 7e-10
Identities = 13/26 (50%), Positives = 17/26 (65%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKRPSKQ 529
DFSPLS+V CKRK+PS++
Sbjct: 856 DFSPLSIVG--------CKRKKPSEE 873
>gb|PON86517.1| DNA mismatch repair protein [Trema orientalis]
Length = 942
Score = 66.2 bits (160), Expect(2) = 9e-10
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +1
Query: 301 ANLRFMEHSGTMI-PVEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
A++ H TM+ VEPG CDQSFGIHVAEFANFP+SVV+LAREK+S + F
Sbjct: 811 AHIDSSTHKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKASELEDF 863
Score = 25.4 bits (54), Expect(2) = 9e-10
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKR 517
DFSP ++V++D + KRKR
Sbjct: 862 DFSPATIVSNDSRVEAGSKRKR 883
>gb|PON62089.1| DNA mismatch repair protein [Parasponia andersonii]
Length = 942
Score = 66.2 bits (160), Expect(2) = 9e-10
Identities = 34/53 (64%), Positives = 41/53 (77%), Gaps = 1/53 (1%)
Frame = +1
Query: 301 ANLRFMEHSGTMI-PVEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
A++ H TM+ VEPG CDQSFGIHVAEFANFP+SVV+LAREK+S + F
Sbjct: 811 AHIDSSTHKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALAREKASELEDF 863
Score = 25.4 bits (54), Expect(2) = 9e-10
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKR 517
DFSP ++V++D + KRKR
Sbjct: 862 DFSPATIVSNDSRVEAGSKRKR 883
>gb|PNX82595.1| DNA mismatch repair protein msh2-like, partial [Trifolium pratense]
Length = 118
Score = 64.7 bits (156), Expect = 9e-10
Identities = 30/41 (73%), Positives = 36/41 (87%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGFLTS 465
VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ + F +S
Sbjct: 1 VEPGACDQSFGIHVAEFANFPESVVALAREKAAELEDFSSS 41
>gb|OMO83064.1| hypothetical protein COLO4_22718 [Corchorus olitorius]
Length = 982
Score = 64.7 bits (156), Expect(2) = 1e-09
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +1
Query: 274 PQT*EEPSFANLRFMEHSGT-------MIPVEPGVCDQSFGIHVAEFANFPKSVVSLARE 432
PQT + AN H + + VEPG CDQSFGIHVAEFANFP+SVV+LARE
Sbjct: 836 PQTKQIVGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALARE 895
Query: 433 KSSGVGGF 456
K++ + F
Sbjct: 896 KAAELEDF 903
Score = 26.6 bits (57), Expect(2) = 1e-09
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKR 517
DFSP S++++D + KRKR
Sbjct: 902 DFSPTSIISNDATEEESSKRKR 923
>ref|XP_015883029.1| PREDICTED: DNA mismatch repair protein MSH2 [Ziziphus jujuba]
Length = 942
Score = 65.1 bits (157), Expect(2) = 1e-09
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
VEPG CDQSFGIHVAEFANFP+SVVSLAREK+S + F
Sbjct: 826 VEPGPCDQSFGIHVAEFANFPESVVSLAREKASELEDF 863
Score = 25.8 bits (55), Expect(2) = 1e-09
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKR 517
DF+P +++++D +V KRKR
Sbjct: 862 DFAPTAIISNDSVEQVGSKRKR 883
>gb|OMO92001.1| hypothetical protein CCACVL1_06935 [Corchorus capsularis]
Length = 1345
Score = 63.9 bits (154), Expect(2) = 2e-09
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +1
Query: 274 PQT*EEPSFANLRFMEHSGT-------MIPVEPGVCDQSFGIHVAEFANFPKSVVSLARE 432
PQT + AN H + + VEPG CDQSFGIHVAEFANFP+SVV+LARE
Sbjct: 796 PQTKQIFGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIHVAEFANFPESVVALARE 855
Query: 433 KSSGVGGF 456
K++ + F
Sbjct: 856 KAAELEDF 863
Score = 26.6 bits (57), Expect(2) = 2e-09
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKR 517
DFSP S++++D + KRKR
Sbjct: 862 DFSPTSIISNDATEEESSKRKR 883
>ref|XP_017973885.1| PREDICTED: DNA mismatch repair protein MSH2 [Theobroma cacao]
Length = 942
Score = 64.3 bits (155), Expect(2) = 2e-09
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGVGGF 456
VEPG CDQSFGIHVAEFANFP+SV+SLAREK++ + F
Sbjct: 826 VEPGACDQSFGIHVAEFANFPESVISLAREKAAELEDF 863
Score = 26.2 bits (56), Expect(2) = 2e-09
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 452 DFSPLSVVADDGEHKVDCKRKR 517
DFSP S+++ D + KRKR
Sbjct: 862 DFSPTSIISSDARQEEGSKRKR 883
>emb|CDY40146.1| BnaC06g05430D [Brassica napus]
Length = 116
Score = 63.5 bits (153), Expect = 2e-09
Identities = 29/35 (82%), Positives = 33/35 (94%)
Frame = +1
Query: 343 VEPGVCDQSFGIHVAEFANFPKSVVSLAREKSSGV 447
VEPG CDQSFGIHVAEFANFP+SVV+LAREK++ V
Sbjct: 79 VEPGACDQSFGIHVAEFANFPESVVALAREKATEV 113