BLASTX nr result

ID: Chrysanthemum21_contig00026907 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00026907
         (496 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PLY88657.1| hypothetical protein LSAT_7X34501 [Lactuca sativa]      63   2e-08
ref|XP_023758711.1| replication protein A 70 kDa DNA-binding sub...    58   8e-07
ref|XP_023758709.1| replication protein A 70 kDa DNA-binding sub...    58   8e-07
ref|XP_023758703.1| replication protein A 70 kDa DNA-binding sub...    58   8e-07
gb|PLY89292.1| hypothetical protein LSAT_2X22101 [Lactuca sativa]      58   9e-07

>gb|PLY88657.1| hypothetical protein LSAT_7X34501 [Lactuca sativa]
          Length = 633

 Score = 62.8 bits (151), Expect = 2e-08
 Identities = 32/62 (51%), Positives = 40/62 (64%)
 Frame = +1

Query: 310 GLSSGTDGTSGILINPPVKEELQMRQW*IDNKQEVQRVLEAEIYKDRC*SLLYPKERDIL 489
           GLS  T G S ILINPPV  ELQ++ W  +N+ E+Q +L  E YKD    L YP+E DIL
Sbjct: 298 GLSLSTKGASAILINPPVTAELQLKAWYNENRSEIQELLNKESYKDVDLLLPYPQEPDIL 357

Query: 490 HV 495
            +
Sbjct: 358 PI 359


>ref|XP_023758711.1| replication protein A 70 kDa DNA-binding subunit B-like isoform X4
           [Lactuca sativa]
          Length = 435

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 31/78 (39%), Positives = 48/78 (61%)
 Frame = +1

Query: 262 TEALKFSASKELAIKEGLSSGTDGTSGILINPPVKEELQMRQW*IDNKQEVQRVLEAEIY 441
           T  L F+   ++    GLS  T   S I+INPPV E+LQ+++W   NK E++ +L+ + Y
Sbjct: 198 TGPLIFAMRVKVTTFNGLSLSTRMGSAIMINPPVTEDLQLQKWYNKNKTELKELLQKKAY 257

Query: 442 KDRC*SLLYPKERDILHV 495
           KD    L YP+E+DI+ +
Sbjct: 258 KDTEILLPYPEEKDIVPI 275


>ref|XP_023758709.1| replication protein A 70 kDa DNA-binding subunit B-like isoform X3
           [Lactuca sativa]
 ref|XP_023758710.1| replication protein A 70 kDa DNA-binding subunit B-like isoform X3
           [Lactuca sativa]
          Length = 440

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 31/78 (39%), Positives = 48/78 (61%)
 Frame = +1

Query: 262 TEALKFSASKELAIKEGLSSGTDGTSGILINPPVKEELQMRQW*IDNKQEVQRVLEAEIY 441
           T  L F+   ++    GLS  T   S I+INPPV E+LQ+++W   NK E++ +L+ + Y
Sbjct: 203 TGPLIFAMRVKVTTFNGLSLSTRMGSAIMINPPVTEDLQLQKWYNKNKTELKELLQKKAY 262

Query: 442 KDRC*SLLYPKERDILHV 495
           KD    L YP+E+DI+ +
Sbjct: 263 KDTEILLPYPEEKDIVPI 280


>ref|XP_023758703.1| replication protein A 70 kDa DNA-binding subunit B-like isoform X2
           [Lactuca sativa]
 ref|XP_023758704.1| replication protein A 70 kDa DNA-binding subunit B-like isoform X2
           [Lactuca sativa]
 ref|XP_023758706.1| replication protein A 70 kDa DNA-binding subunit B-like isoform X2
           [Lactuca sativa]
 ref|XP_023758707.1| replication protein A 70 kDa DNA-binding subunit B-like isoform X2
           [Lactuca sativa]
 ref|XP_023758708.1| replication protein A 70 kDa DNA-binding subunit B-like isoform X2
           [Lactuca sativa]
          Length = 446

 Score = 58.2 bits (139), Expect = 8e-07
 Identities = 31/78 (39%), Positives = 48/78 (61%)
 Frame = +1

Query: 262 TEALKFSASKELAIKEGLSSGTDGTSGILINPPVKEELQMRQW*IDNKQEVQRVLEAEIY 441
           T  L F+   ++    GLS  T   S I+INPPV E+LQ+++W   NK E++ +L+ + Y
Sbjct: 209 TGPLIFAMRVKVTTFNGLSLSTRMGSAIMINPPVTEDLQLQKWYNKNKTELKELLQKKAY 268

Query: 442 KDRC*SLLYPKERDILHV 495
           KD    L YP+E+DI+ +
Sbjct: 269 KDTEILLPYPEEKDIVPI 286


>gb|PLY89292.1| hypothetical protein LSAT_2X22101 [Lactuca sativa]
          Length = 520

 Score = 58.2 bits (139), Expect = 9e-07
 Identities = 31/78 (39%), Positives = 48/78 (61%)
 Frame = +1

Query: 262 TEALKFSASKELAIKEGLSSGTDGTSGILINPPVKEELQMRQW*IDNKQEVQRVLEAEIY 441
           T  L F+   ++    GLS  T   S I+INPPV E+LQ+++W   NK E++ +L+ + Y
Sbjct: 203 TGPLIFAMRVKVTTFNGLSLSTRMGSAIMINPPVTEDLQLQKWYNKNKTELKELLQKKAY 262

Query: 442 KDRC*SLLYPKERDILHV 495
           KD    L YP+E+DI+ +
Sbjct: 263 KDTEILLPYPEEKDIVPI 280


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