BLASTX nr result

ID: Chrysanthemum21_contig00026888 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00026888
         (428 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023746189.1| uncharacterized protein LOC111894346 [Lactuc...    43   8e-07
gb|KVH98886.1| protein of unknown function DUF627, N-terminal [C...    40   6e-06

>ref|XP_023746189.1| uncharacterized protein LOC111894346 [Lactuca sativa]
 ref|XP_023746190.1| uncharacterized protein LOC111894346 [Lactuca sativa]
 gb|PLY64424.1| hypothetical protein LSAT_5X18460 [Lactuca sativa]
          Length = 1394

 Score = 42.7 bits (99), Expect(2) = 8e-07
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = +2

Query: 92  INKVSKTVEERKKEIDVKLDAPNLLQ*KQELDL 190
           I K SKT EERKKEI+VK+ A  LLQ KQEL L
Sbjct: 277 IKKASKTDEERKKEIEVKVAAARLLQQKQELSL 309



 Score = 37.7 bits (86), Expect(2) = 8e-07
 Identities = 20/35 (57%), Positives = 25/35 (71%), Gaps = 4/35 (11%)
 Frame = +1

Query: 1   ENLGYGKDKFRIIPIR*V----SDVRVVEGRKRND 93
           +NLG G++KFRIIPIR       DVRVV+ R+ ND
Sbjct: 242 KNLGNGEEKFRIIPIRRAPDDPMDVRVVQARRPND 276


>gb|KVH98886.1| protein of unknown function DUF627, N-terminal [Cynara cardunculus
           var. scolymus]
          Length = 1643

 Score = 40.4 bits (93), Expect(2) = 6e-06
 Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
 Frame = +1

Query: 1   ENLGYGKDKFRIIPIR*V----SDVRVVEGRKRND 93
           +NLG G+DKFRIIPIR V     D+RVV+ R+ ND
Sbjct: 235 KNLGNGEDKFRIIPIRRVPEDPMDIRVVQARRPND 269



 Score = 37.0 bits (84), Expect(2) = 6e-06
 Identities = 20/33 (60%), Positives = 23/33 (69%)
 Frame = +2

Query: 92  INKVSKTVEERKKEIDVKLDAPNLLQ*KQELDL 190
           I K +KT EERKKEI+VK+ A  LLQ K E  L
Sbjct: 270 IKKANKTEEERKKEIEVKVAAARLLQQKLESSL 302


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