BLASTX nr result
ID: Chrysanthemum21_contig00026732
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00026732
(889 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVH56472.1| CID domain-containing protein [Cynara cardunculus... 277 4e-82
gb|KVH87854.1| CID domain-containing protein, partial [Cynara ca... 251 3e-75
ref|XP_021970843.1| polyadenylation and cleavage factor homolog ... 209 3e-58
ref|XP_021970842.1| polyadenylation and cleavage factor homolog ... 209 3e-58
ref|XP_021970844.1| polyadenylation and cleavage factor homolog ... 204 2e-56
ref|XP_010654041.1| PREDICTED: polyadenylation and cleavage fact... 122 2e-27
emb|CBI30249.3| unnamed protein product, partial [Vitis vinifera] 122 3e-27
ref|XP_021678806.1| polyadenylation and cleavage factor homolog ... 121 4e-27
ref|XP_021678804.1| polyadenylation and cleavage factor homolog ... 121 4e-27
ref|XP_021644863.1| polyadenylation and cleavage factor homolog ... 118 6e-26
ref|XP_021621312.1| polyadenylation and cleavage factor homolog ... 115 4e-25
ref|XP_008241290.1| PREDICTED: polyadenylation and cleavage fact... 115 7e-25
ref|XP_011466794.1| PREDICTED: polyadenylation and cleavage fact... 115 7e-25
ref|XP_011466793.1| PREDICTED: polyadenylation and cleavage fact... 115 7e-25
gb|ONH96261.1| hypothetical protein PRUPE_7G117000 [Prunus persica] 113 2e-24
ref|XP_020423627.1| polyadenylation and cleavage factor homolog ... 113 2e-24
ref|XP_021810115.1| polyadenylation and cleavage factor homolog ... 112 5e-24
gb|POE58102.1| isoform 2 of polyadenylation and cleavage factor ... 112 5e-24
ref|XP_023894769.1| LOW QUALITY PROTEIN: polyadenylation and cle... 112 5e-24
ref|XP_023749740.1| polyadenylation and cleavage factor homolog ... 112 5e-24
>gb|KVH56472.1| CID domain-containing protein [Cynara cardunculus var. scolymus]
Length = 1086
Score = 277 bits (709), Expect = 4e-82
Identities = 169/342 (49%), Positives = 204/342 (59%), Gaps = 47/342 (13%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDNDSAPYNDCDYGSD------AGFRKSSATVGEQGFNNSWYGSGN 163
NIQQ QR+VE + +ND APY+D DY SD A F KSS V EQGF+NSWYG+G+
Sbjct: 305 NIQQAQRDVESTCLRENDGAPYSDFDYCSDVLIPSEASFGKSSEIVAEQGFDNSWYGAGS 364
Query: 164 NSTEPISGQRNGFDMKHGI--LSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEEY 337
N+TE ISGQRNGFD+KHG LS R+ANADVKLQP NNIA KRG E N SWKNSEEEEY
Sbjct: 365 NTTETISGQRNGFDVKHGFPNLSASRTANADVKLQPMNNIASKRGGEANRSWKNSEEEEY 424
Query: 338 TWDGMNSRVANPGKSNSSSKRDPRSQPKLEKMGF----QKLQGIKD----------TNPL 475
WD MNSR+A PGKS SSSKRDPR+ P EK+GF QK QGI++ ++ L
Sbjct: 425 MWDDMNSRLAIPGKSGSSSKRDPRAHPMNEKLGFENRLQKPQGIQNIGLRVDREASSDSL 484
Query: 476 STDQNNGGVF---------XXXXXXXXXXXXXXFNGVATSVNSLSKTSLESPIRSSHVDV 628
S +Q +G VF F GV+TSVNSLSKTSL+ + +SHV
Sbjct: 485 SANQKDGAVFRQPVQSLSSLRNLLDHEEVHSTSFGGVSTSVNSLSKTSLQPQMGASHVGT 544
Query: 629 PGLMFTPSVVRGQQRHTNGVAXXXXXXXXXXXXXXXXXXTYNASKIMHDIAAQD------ 790
L F P+ + G QRHT A TY++SKI+H+++ +D
Sbjct: 545 QPLGFPPNAITG-QRHTLAAASPSGQAPTHQRPPSPSFPTYHSSKILHNLSGRDPPTTRQ 603
Query: 791 --GPDSKPAQSRGQK--GIS------SIKGIPQILRMGNSQK 886
G D KPA+SRGQK G+S S +GI QI M N QK
Sbjct: 604 LVGADGKPARSRGQKNTGLSSQSTQDSFQGIXQISHMXNPQK 645
>gb|KVH87854.1| CID domain-containing protein, partial [Cynara cardunculus var.
scolymus]
Length = 624
Score = 251 bits (640), Expect = 3e-75
Identities = 152/316 (48%), Positives = 184/316 (58%), Gaps = 51/316 (16%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDNDSAPYNDCDYGSD------AGFRKSSATVGEQGFNNSWYGSGN 163
NIQQ QR+VE A I +ND APY+D DY SD A F KSS V EQGF++SWYG+G+
Sbjct: 305 NIQQAQRDVESACIRENDGAPYSDFDYCSDVLIPSEASFGKSSEIVAEQGFDSSWYGAGS 364
Query: 164 NSTEPISGQRNGFDMKHGI--LSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEEY 337
N+TE ISGQRNGFD+KHG LS RSANADVKLQP NNIA KRG EVN SWKNSEEEEY
Sbjct: 365 NTTETISGQRNGFDVKHGFSNLSASRSANADVKLQPVNNIASKRGGEVNRSWKNSEEEEY 424
Query: 338 TWDGMNSRVANPGKSNSSSKRDPRSQPKLEK--------------------MGF----QK 445
WD MNSR+A PGKS SSSKRDPR+ EK +GF QK
Sbjct: 425 MWDDMNSRLATPGKSGSSSKRDPRAHSMNEKLWCVHLNKEYDMDHATWFFILGFENRLQK 484
Query: 446 LQGIKD----------TNPLSTDQNNGGVF---------XXXXXXXXXXXXXXFNGVATS 568
QGI++ ++ LS +Q +G VF F+GV+TS
Sbjct: 485 PQGIQNIGSKVDREASSDSLSANQKDGAVFRQPVQSLGSRRNLLDHAEVHSTSFSGVSTS 544
Query: 569 VNSLSKTSLESPIRSSHVDVPGLMFTPSVVRGQQRHTNGVAXXXXXXXXXXXXXXXXXXT 748
VNSLSKTSL+ I +SH+ L F P+ + G QRHT G A T
Sbjct: 545 VNSLSKTSLQPQIGASHIGTQPLGFPPNAITG-QRHTLGAASSSGQAPTHQRPPSPLLPT 603
Query: 749 YNASKIMHDIAAQDGP 796
Y++SKI+H+++ +D P
Sbjct: 604 YHSSKILHNLSGRDPP 619
>ref|XP_021970843.1| polyadenylation and cleavage factor homolog 4-like isoform X2
[Helianthus annuus]
Length = 843
Score = 209 bits (533), Expect = 3e-58
Identities = 142/307 (46%), Positives = 172/307 (56%), Gaps = 11/307 (3%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDNDSAPYNDCDYGSDAGFRKSSATVGEQGFNNSWYGSGNNSTEPI 181
NI Q QR V G+ I +N+ APYND D SS V EQGF NS YG +NSTE I
Sbjct: 284 NIPQAQRNV-GSVIRENERAPYNDFD---------SSEIVNEQGFGNSLYGPASNSTETI 333
Query: 182 SGQRNGFDMKHGILSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEEYTWDGMNSR 361
SG RNGFDM RSANAD KLQPTNNI ++ G E+N SWK+SEEEEY WDGMNSR
Sbjct: 334 SGHRNGFDM--------RSANADGKLQPTNNITKRNG-ELNRSWKHSEEEEYMWDGMNSR 384
Query: 362 VANPGKSNSSSKRDPRSQPKLEKMGF----QKLQGIKDT-----NPLSTDQNNGGVFXXX 514
+ N KS+ +SKRDPRS P EK+GF QK QGI+DT STD +
Sbjct: 385 LPNSVKSSGNSKRDPRSHPGPEKLGFQNHLQKSQGIQDTGSRVDREASTDSPS------- 437
Query: 515 XXXXXXXXXXXFNGVATSVNSLSKTSLESPIRSSHVDVPGLM-FTPSVVRGQQRHTNGVA 691
FNGV+TS+NS+ K+SL+ I SSHV GL+ F PS V+ QRHT G A
Sbjct: 438 ---VARPQGPAFNGVSTSINSILKSSLQPQIGSSHVGASGLLGFPPSAVK--QRHTPGAA 492
Query: 692 XXXXXXXXXXXXXXXXXXTYNASKIMHDIAAQDGPDSKPAQSRGQKGISSIKGIPQ-ILR 868
T+ + +++++ QDG KPA SRG+ PQ
Sbjct: 493 -----SPLLHHPPTPSFPTHTSGRLLNNFTGQDG---KPALSRGEINTGLSNQSPQDSFH 544
Query: 869 MGNSQKP 889
G+SQKP
Sbjct: 545 TGDSQKP 551
>ref|XP_021970842.1| polyadenylation and cleavage factor homolog 4-like isoform X1
[Helianthus annuus]
gb|OTG23483.1| putative zinc finger, C2H2, ENTH/VHS [Helianthus annuus]
Length = 846
Score = 209 bits (533), Expect = 3e-58
Identities = 142/307 (46%), Positives = 172/307 (56%), Gaps = 11/307 (3%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDNDSAPYNDCDYGSDAGFRKSSATVGEQGFNNSWYGSGNNSTEPI 181
NI Q QR V G+ I +N+ APYND D SS V EQGF NS YG +NSTE I
Sbjct: 287 NIPQAQRNV-GSVIRENERAPYNDFD---------SSEIVNEQGFGNSLYGPASNSTETI 336
Query: 182 SGQRNGFDMKHGILSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEEYTWDGMNSR 361
SG RNGFDM RSANAD KLQPTNNI ++ G E+N SWK+SEEEEY WDGMNSR
Sbjct: 337 SGHRNGFDM--------RSANADGKLQPTNNITKRNG-ELNRSWKHSEEEEYMWDGMNSR 387
Query: 362 VANPGKSNSSSKRDPRSQPKLEKMGF----QKLQGIKDT-----NPLSTDQNNGGVFXXX 514
+ N KS+ +SKRDPRS P EK+GF QK QGI+DT STD +
Sbjct: 388 LPNSVKSSGNSKRDPRSHPGPEKLGFQNHLQKSQGIQDTGSRVDREASTDSPS------- 440
Query: 515 XXXXXXXXXXXFNGVATSVNSLSKTSLESPIRSSHVDVPGLM-FTPSVVRGQQRHTNGVA 691
FNGV+TS+NS+ K+SL+ I SSHV GL+ F PS V+ QRHT G A
Sbjct: 441 ---VARPQGPAFNGVSTSINSILKSSLQPQIGSSHVGASGLLGFPPSAVK--QRHTPGAA 495
Query: 692 XXXXXXXXXXXXXXXXXXTYNASKIMHDIAAQDGPDSKPAQSRGQKGISSIKGIPQ-ILR 868
T+ + +++++ QDG KPA SRG+ PQ
Sbjct: 496 -----SPLLHHPPTPSFPTHTSGRLLNNFTGQDG---KPALSRGEINTGLSNQSPQDSFH 547
Query: 869 MGNSQKP 889
G+SQKP
Sbjct: 548 TGDSQKP 554
>ref|XP_021970844.1| polyadenylation and cleavage factor homolog 4-like isoform X3
[Helianthus annuus]
Length = 839
Score = 204 bits (520), Expect = 2e-56
Identities = 139/302 (46%), Positives = 169/302 (55%), Gaps = 11/302 (3%)
Frame = +2
Query: 17 QREVEGASIHDNDSAPYNDCDYGSDAGFRKSSATVGEQGFNNSWYGSGNNSTEPISGQRN 196
QR V G+ I +N+ APYND D SS V EQGF NS YG +NSTE ISG RN
Sbjct: 285 QRNV-GSVIRENERAPYNDFD---------SSEIVNEQGFGNSLYGPASNSTETISGHRN 334
Query: 197 GFDMKHGILSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEEYTWDGMNSRVANPG 376
GFDM RSANAD KLQPTNNI ++ G E+N SWK+SEEEEY WDGMNSR+ N
Sbjct: 335 GFDM--------RSANADGKLQPTNNITKRNG-ELNRSWKHSEEEEYMWDGMNSRLPNSV 385
Query: 377 KSNSSSKRDPRSQPKLEKMGF----QKLQGIKDT-----NPLSTDQNNGGVFXXXXXXXX 529
KS+ +SKRDPRS P EK+GF QK QGI+DT STD +
Sbjct: 386 KSSGNSKRDPRSHPGPEKLGFQNHLQKSQGIQDTGSRVDREASTDSPS----------VA 435
Query: 530 XXXXXXFNGVATSVNSLSKTSLESPIRSSHVDVPGLM-FTPSVVRGQQRHTNGVAXXXXX 706
FNGV+TS+NS+ K+SL+ I SSHV GL+ F PS V+ QRHT G A
Sbjct: 436 RPQGPAFNGVSTSINSILKSSLQPQIGSSHVGASGLLGFPPSAVK--QRHTPGAA----- 488
Query: 707 XXXXXXXXXXXXXTYNASKIMHDIAAQDGPDSKPAQSRGQKGISSIKGIPQ-ILRMGNSQ 883
T+ + +++++ QDG KPA SRG+ PQ G+SQ
Sbjct: 489 SPLLHHPPTPSFPTHTSGRLLNNFTGQDG---KPALSRGEINTGLSNQSPQDSFHTGDSQ 545
Query: 884 KP 889
KP
Sbjct: 546 KP 547
>ref|XP_010654041.1| PREDICTED: polyadenylation and cleavage factor homolog 4 [Vitis
vinifera]
Length = 1086
Score = 122 bits (307), Expect = 2e-27
Identities = 90/271 (33%), Positives = 121/271 (44%), Gaps = 43/271 (15%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDNDSAPYNDCDYGSDAGFRKSSATVG---EQGFNNSWYGSGNNST 172
+IQ RE G + APY D +YG+D R +G EQG + WY +G
Sbjct: 283 SIQHSHREAIGELVEKKIGAPYGDYEYGTDLS-RNPGLGIGRPSEQGHDKPWYKAGGRVV 341
Query: 173 EPISGQRNGFDMKHGILS--VPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEEYTWD 346
E S QRNGFD+KHG + PRSANAD LQPT + + S ++ SWKNSEEEEY WD
Sbjct: 342 ETFSSQRNGFDIKHGFPNYPAPRSANADAHLQPTQSTVNRSNSGMSRSWKNSEEEEYMWD 401
Query: 347 GMNSRVANPGKSNSSSKRDPRSQPKLEKMGF----QKLQGIKD----------TNPLSTD 484
MNS++ +N SK+D + EK+ F QK Q I D T+ +S++
Sbjct: 402 DMNSKMTEHSAAN-HSKKDRWTPDDSEKLDFENQLQKPQSIYDVGSSVDRETSTDSMSSE 460
Query: 485 QNNGGVF-----------------------XXXXXXXXXXXXXXFNGVATSV-NSLSKTS 592
Q G F +G++TS +SL++T
Sbjct: 461 QREQGAFGHRMSSLWPLQEPHSTDGLKHSGTSTLILGHSEGYPTVSGLSTSASSSLARTG 520
Query: 593 LESPIRSSHVDVPGLMFTPSVVRGQQRHTNG 685
L + SSH G F + G T G
Sbjct: 521 LRPLMGSSHAGASGFGFLTNASSGSTTGTVG 551
>emb|CBI30249.3| unnamed protein product, partial [Vitis vinifera]
Length = 1049
Score = 122 bits (305), Expect = 3e-27
Identities = 75/187 (40%), Positives = 98/187 (52%), Gaps = 19/187 (10%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDNDSAPYNDCDYGSDAGFRKSSATVG---EQGFNNSWYGSGNNST 172
+IQ RE G + APY D +YG+D R +G EQG + WY +G
Sbjct: 362 SIQHSHREAIGELVEKKIGAPYGDYEYGTDLS-RNPGLGIGRPSEQGHDKPWYKAGGRVV 420
Query: 173 EPISGQRNGFDMKHGILS--VPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEEYTWD 346
E S QRNGFD+KHG + PRSANAD LQPT + + S ++ SWKNSEEEEY WD
Sbjct: 421 ETFSSQRNGFDIKHGFPNYPAPRSANADAHLQPTQSTVNRSNSGMSRSWKNSEEEEYMWD 480
Query: 347 GMNSRVANPGKSNSSSKRDPRSQPKLEKMGF----QKLQGIKD----------TNPLSTD 484
MNS++ +N SK+D + EK+ F QK Q I D T+ +S++
Sbjct: 481 DMNSKMTEHSAAN-HSKKDRWTPDDSEKLDFENQLQKPQSIYDVGSSVDRETSTDSMSSE 539
Query: 485 QNNGGVF 505
Q G F
Sbjct: 540 QREQGAF 546
>ref|XP_021678806.1| polyadenylation and cleavage factor homolog 4-like isoform X3
[Hevea brasiliensis]
ref|XP_021678807.1| polyadenylation and cleavage factor homolog 4-like isoform X3
[Hevea brasiliensis]
Length = 909
Score = 121 bits (304), Expect = 4e-27
Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 11/158 (6%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDN-DSAPYNDCDYGSD------AGFRKSSATVGEQGFNNSWYGSG 160
NIQ RE +H+ SA Y D +Y SD G +++ V EQG+ WYG+
Sbjct: 113 NIQHSHRETLSEPVHEKKSSAVYGDFEYSSDISRNLGVGIERTNGRVTEQGYEKPWYGAA 172
Query: 161 NNSTEPISGQRNGFDMKHGI--LSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
N +E ISGQ+NG MKH LS P+SAN D+ LQPT I K S ++GSWKNSEEEE
Sbjct: 173 NGVSETISGQKNGLSMKHAFPNLSTPKSANVDLHLQPTQGIVSKSSSPMSGSWKNSEEEE 232
Query: 335 YTWDGMNSRVANPGKSN--SSSKRDPRSQPKLEKMGFQ 442
+ WD M+SR+++ +N ++S++D + EK F+
Sbjct: 233 FMWD-MHSRLSDQDAANLSNNSRKDHWTPDDSEKFEFE 269
>ref|XP_021678804.1| polyadenylation and cleavage factor homolog 4-like isoform X1
[Hevea brasiliensis]
ref|XP_021678805.1| polyadenylation and cleavage factor homolog 4-like isoform X2
[Hevea brasiliensis]
Length = 1086
Score = 121 bits (304), Expect = 4e-27
Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 11/158 (6%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDN-DSAPYNDCDYGSD------AGFRKSSATVGEQGFNNSWYGSG 160
NIQ RE +H+ SA Y D +Y SD G +++ V EQG+ WYG+
Sbjct: 290 NIQHSHRETLSEPVHEKKSSAVYGDFEYSSDISRNLGVGIERTNGRVTEQGYEKPWYGAA 349
Query: 161 NNSTEPISGQRNGFDMKHGI--LSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
N +E ISGQ+NG MKH LS P+SAN D+ LQPT I K S ++GSWKNSEEEE
Sbjct: 350 NGVSETISGQKNGLSMKHAFPNLSTPKSANVDLHLQPTQGIVSKSSSPMSGSWKNSEEEE 409
Query: 335 YTWDGMNSRVANPGKSN--SSSKRDPRSQPKLEKMGFQ 442
+ WD M+SR+++ +N ++S++D + EK F+
Sbjct: 410 FMWD-MHSRLSDQDAANLSNNSRKDHWTPDDSEKFEFE 446
>ref|XP_021644863.1| polyadenylation and cleavage factor homolog 4 [Hevea brasiliensis]
Length = 1085
Score = 118 bits (295), Expect = 6e-26
Identities = 67/157 (42%), Positives = 88/157 (56%), Gaps = 11/157 (7%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDND-SAPYNDCDYGSDA------GFRKSSATVGEQGFNNSWYGSG 160
NIQ RE + + A Y D +Y SD G ++ V EQG+ W+G+G
Sbjct: 289 NIQHSHRETSSEPVQEKKIGAIYGDVEYSSDISRNSGLGIGRTGGRVAEQGYEKPWFGAG 348
Query: 161 NNSTEPISGQRNGFDMKHGI--LSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
N TE I GQRNGF KHG S +SAN D+ LQPT I K S ++ SWKNSEEEE
Sbjct: 349 NRVTETIPGQRNGFSAKHGFPNFSTSKSANVDLHLQPTKGIVSKSSSAMSDSWKNSEEEE 408
Query: 335 YTWDGMNSRVANPGKSNSS--SKRDPRSQPKLEKMGF 439
+ WD M SR+++ +N S S++D + LEK+GF
Sbjct: 409 FMWD-MPSRLSDQDAANPSNNSRKDRWTPDDLEKLGF 444
>ref|XP_021621312.1| polyadenylation and cleavage factor homolog 4 [Manihot esculenta]
gb|OAY42850.1| hypothetical protein MANES_08G021000 [Manihot esculenta]
Length = 1082
Score = 115 bits (289), Expect = 4e-25
Identities = 66/156 (42%), Positives = 88/156 (56%), Gaps = 10/156 (6%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDNDSAPYNDCDYGSD------AGFRKSSATVGEQGFNNSWYGSGN 163
N Q+ RE ++ Y D +Y SD G ++S + EQG WYG+GN
Sbjct: 290 NFQRSHRETPTEAVQQKIGTIYGDLEYSSDMSRNSDVGIGRTSGRIAEQGSEKPWYGAGN 349
Query: 164 NSTEPISGQRNGFDMKHGI--LSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEEY 337
+ TE I GQRNGF MKHG S +SAN D LQPT IA K + ++ SWKNSEEEE+
Sbjct: 350 SVTETIPGQRNGFSMKHGFPNFSTSKSANVDF-LQPTQGIASKSSNAMSASWKNSEEEEF 408
Query: 338 TWDGMNSRVANPGKSNSS--SKRDPRSQPKLEKMGF 439
WD M+SR+++P N S S++D + EK+ F
Sbjct: 409 MWD-MHSRLSDPNAVNPSNNSRKDRWTPDDSEKLEF 443
>ref|XP_008241290.1| PREDICTED: polyadenylation and cleavage factor homolog 4 isoform X1
[Prunus mume]
Length = 1094
Score = 115 bits (287), Expect = 7e-25
Identities = 62/157 (39%), Positives = 93/157 (59%), Gaps = 11/157 (7%)
Frame = +2
Query: 2 NIQQIQREVEGASIHD-NDSAPYNDCDYGSDA------GFRKSSATVGEQGFNNSWYGSG 160
N+Q+ + + +H+ N A Y + +YGSD G + + EQG + WYG G
Sbjct: 290 NMQRSNTDAQSERVHEKNIGAEYGEYEYGSDLPRSSNLGIGRIGGKITEQGNDKPWYGGG 349
Query: 161 NNSTEPISGQRNGFDMKHGIL--SVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
++ E IS QRNGF++KHG+ S P+SANAD +L+ IA + ++ SWKNSEEEE
Sbjct: 350 SSVAETISSQRNGFNIKHGLTNYSAPKSANADPRLKTAPAIASRSSGVLSTSWKNSEEEE 409
Query: 335 YTWDGMNSRVAN--PGKSNSSSKRDPRSQPKLEKMGF 439
+ WD MNSR+ + P +S+S++D + EK+GF
Sbjct: 410 FKWDDMNSRLTDHGPPDISSNSRKDRWTSDDSEKLGF 446
>ref|XP_011466794.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X2 [Fragaria vesca subsp. vesca]
Length = 1100
Score = 115 bits (287), Expect = 7e-25
Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 15/176 (8%)
Frame = +2
Query: 2 NIQQIQREVEGASIHD-NDSAPYNDCDYGSDAGFRKSSATVG-------EQGFNNSWYGS 157
NIQ+ R+ H+ N Y++ DY SD R SS +G EQG + WYG
Sbjct: 290 NIQRSTRDALSERFHEKNVGGEYDESDYDSDLP-RSSSLAIGRSGGNIIEQGHDKPWYGG 348
Query: 158 GNNSTEPISGQRNGFDMKHGI-LSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
+++ E ISGQRNGF+ KHG+ S P+SANAD +LQ IA + ++ SWKNSEEEE
Sbjct: 349 VSSAAETISGQRNGFNKKHGLNYSAPKSANADPRLQTPQAIASRNRGGLSSSWKNSEEEE 408
Query: 335 YTWDGMNSRVAN--PGKSNSSSKRDPRSQPKLEKMGF----QKLQGIKDTNPLSTD 484
Y WD MNSR+ + +S+S+++ EKMGF +KL+ + D + + TD
Sbjct: 409 YMWDDMNSRLTDHVTPDLSSNSRKERWISDDSEKMGFGGGSRKLKRVNDLD-MDTD 463
>ref|XP_011466793.1| PREDICTED: polyadenylation and cleavage factor homolog 4-like
isoform X1 [Fragaria vesca subsp. vesca]
Length = 1101
Score = 115 bits (287), Expect = 7e-25
Identities = 72/176 (40%), Positives = 101/176 (57%), Gaps = 15/176 (8%)
Frame = +2
Query: 2 NIQQIQREVEGASIHD-NDSAPYNDCDYGSDAGFRKSSATVG-------EQGFNNSWYGS 157
NIQ+ R+ H+ N Y++ DY SD R SS +G EQG + WYG
Sbjct: 291 NIQRSTRDALSERFHEKNVGGEYDESDYDSDLP-RSSSLAIGRSGGNIIEQGHDKPWYGG 349
Query: 158 GNNSTEPISGQRNGFDMKHGI-LSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
+++ E ISGQRNGF+ KHG+ S P+SANAD +LQ IA + ++ SWKNSEEEE
Sbjct: 350 VSSAAETISGQRNGFNKKHGLNYSAPKSANADPRLQTPQAIASRNRGGLSSSWKNSEEEE 409
Query: 335 YTWDGMNSRVAN--PGKSNSSSKRDPRSQPKLEKMGF----QKLQGIKDTNPLSTD 484
Y WD MNSR+ + +S+S+++ EKMGF +KL+ + D + + TD
Sbjct: 410 YMWDDMNSRLTDHVTPDLSSNSRKERWISDDSEKMGFGGGSRKLKRVNDLD-MDTD 464
>gb|ONH96261.1| hypothetical protein PRUPE_7G117000 [Prunus persica]
Length = 1025
Score = 113 bits (283), Expect = 2e-24
Identities = 62/157 (39%), Positives = 92/157 (58%), Gaps = 11/157 (7%)
Frame = +2
Query: 2 NIQQIQREVEGASIHD-NDSAPYNDCDYGSDA------GFRKSSATVGEQGFNNSWYGSG 160
N+Q+ + +H+ N A Y + +YGSD G + + EQG + WYG G
Sbjct: 217 NMQRSNTDALSERVHEKNIGAEYGEYEYGSDLPRSSNLGIGRIGGKITEQGNDKPWYGGG 276
Query: 161 NNSTEPISGQRNGFDMKHGIL--SVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
++ E IS QRNGF++KHG+ S P+SANAD +L+ IA + ++ SWKNSEEEE
Sbjct: 277 SSVAETISSQRNGFNIKHGLTNYSAPKSANADPRLKTAPAIASRSSGVLSNSWKNSEEEE 336
Query: 335 YTWDGMNSRVAN--PGKSNSSSKRDPRSQPKLEKMGF 439
+ WD MNSR+ + P +S+S++D + EK+GF
Sbjct: 337 FKWDDMNSRLTDHGPPDISSNSRKDCWTSDDSEKLGF 373
>ref|XP_020423627.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Prunus
persica]
gb|ONH96258.1| hypothetical protein PRUPE_7G117000 [Prunus persica]
gb|ONH96259.1| hypothetical protein PRUPE_7G117000 [Prunus persica]
Length = 1098
Score = 113 bits (283), Expect = 2e-24
Identities = 62/157 (39%), Positives = 92/157 (58%), Gaps = 11/157 (7%)
Frame = +2
Query: 2 NIQQIQREVEGASIHD-NDSAPYNDCDYGSDA------GFRKSSATVGEQGFNNSWYGSG 160
N+Q+ + +H+ N A Y + +YGSD G + + EQG + WYG G
Sbjct: 290 NMQRSNTDALSERVHEKNIGAEYGEYEYGSDLPRSSNLGIGRIGGKITEQGNDKPWYGGG 349
Query: 161 NNSTEPISGQRNGFDMKHGIL--SVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
++ E IS QRNGF++KHG+ S P+SANAD +L+ IA + ++ SWKNSEEEE
Sbjct: 350 SSVAETISSQRNGFNIKHGLTNYSAPKSANADPRLKTAPAIASRSSGVLSNSWKNSEEEE 409
Query: 335 YTWDGMNSRVAN--PGKSNSSSKRDPRSQPKLEKMGF 439
+ WD MNSR+ + P +S+S++D + EK+GF
Sbjct: 410 FKWDDMNSRLTDHGPPDISSNSRKDCWTSDDSEKLGF 446
>ref|XP_021810115.1| polyadenylation and cleavage factor homolog 4 isoform X1 [Prunus
avium]
Length = 1098
Score = 112 bits (281), Expect = 5e-24
Identities = 62/157 (39%), Positives = 91/157 (57%), Gaps = 11/157 (7%)
Frame = +2
Query: 2 NIQQIQREVEGASIHD-NDSAPYNDCDYGSDA------GFRKSSATVGEQGFNNSWYGSG 160
N+Q+ + +H+ N A Y + +YGSD G + + EQG + WYG G
Sbjct: 290 NMQRSNTDALSERVHEKNIGAEYGEYEYGSDLPRSSNLGIGRIGGKITEQGNDKPWYGGG 349
Query: 161 NNSTEPISGQRNGFDMKHGIL--SVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
++ E IS QRNGF++KHG+ S P+SANAD +L+ IA + ++ SWKNSEEEE
Sbjct: 350 SSVAESISSQRNGFNIKHGLTNYSAPKSANADPRLKTAPAIASRSSGVLSSSWKNSEEEE 409
Query: 335 YTWDGMNSRVAN--PGKSNSSSKRDPRSQPKLEKMGF 439
+ WD MNSR+ + P +S+S +D + EK+GF
Sbjct: 410 FKWDDMNSRLTDHGPPDISSNSTKDRWTSDDSEKLGF 446
>gb|POE58102.1| isoform 2 of polyadenylation and cleavage factor like 4 [Quercus
suber]
Length = 1113
Score = 112 bits (281), Expect = 5e-24
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 11/151 (7%)
Frame = +2
Query: 2 NIQQIQREVEGASIHD-NDSAPYNDCDYGSDAGFRKSSAT------VGEQGFNNSWYGSG 160
N+Q+ R+ +H+ N A Y D +Y SD SAT + EQG + WYG+
Sbjct: 310 NVQRPNRDALSGPLHEKNVGAAYGDYEYSSDLSRTLGSATGRTGGRIAEQGHDKPWYGAA 369
Query: 161 NNSTEPISGQRNGFDMKHGILS--VPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
++ E IS Q+NGF++KHG+ + P+SA AD++L+PT +I + ++ SWKNSEEEE
Sbjct: 370 SSVVETISSQKNGFNIKHGLPNYRAPKSAYADLQLKPTQSITNRSSGAISSSWKNSEEEE 429
Query: 335 YTWDGMNSRVANPGKS--NSSSKRDPRSQPK 421
+ WD +NSR+ + G ++ S++DP K
Sbjct: 430 FMWDDVNSRLPDHGAPTISNDSRKDPNDSRK 460
>ref|XP_023894769.1| LOW QUALITY PROTEIN: polyadenylation and cleavage factor homolog 4
[Quercus suber]
Length = 1190
Score = 112 bits (281), Expect = 5e-24
Identities = 58/151 (38%), Positives = 90/151 (59%), Gaps = 11/151 (7%)
Frame = +2
Query: 2 NIQQIQREVEGASIHD-NDSAPYNDCDYGSDAGFRKSSAT------VGEQGFNNSWYGSG 160
N+Q+ R+ +H+ N A Y D +Y SD SAT + EQG + WYG+
Sbjct: 310 NVQRPNRDALSGPLHEKNVGAAYGDYEYSSDLSRTLGSATGRTGGRIAEQGHDKPWYGAA 369
Query: 161 NNSTEPISGQRNGFDMKHGILS--VPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEE 334
++ E IS Q+NGF++KHG+ + P+SA AD++L+PT +I + ++ SWKNSEEEE
Sbjct: 370 SSVVETISSQKNGFNIKHGLPNYRAPKSAYADLQLKPTQSITNRSSGAISSSWKNSEEEE 429
Query: 335 YTWDGMNSRVANPGKS--NSSSKRDPRSQPK 421
+ WD +NSR+ + G ++ S++DP K
Sbjct: 430 FMWDDVNSRLPDHGAPTISNDSRKDPNDSRK 460
>ref|XP_023749740.1| polyadenylation and cleavage factor homolog 4-like [Lactuca sativa]
gb|PLY61645.1| hypothetical protein LSAT_2X21361 [Lactuca sativa]
Length = 717
Score = 112 bits (280), Expect = 5e-24
Identities = 71/148 (47%), Positives = 83/148 (56%), Gaps = 10/148 (6%)
Frame = +2
Query: 2 NIQQIQREVEGASIHDNDSAPYNDCDYGSDAGFRKSSATVGEQGFNNSWY-----GSGNN 166
NIQQ QR+V+ SI +ND ND DY S E GF++SWY GN
Sbjct: 303 NIQQAQRDVDTVSIREND----NDFDYES------------EPGFDSSWYPPGGSSGGNG 346
Query: 167 STEPISGQRNGFDMKHGILSVPRSANADVKLQPTNNIARKRGSEVNGSWKNSEEEEYTWD 346
+SGQRNG HG V + LQP+NNI K+G VN SWKNSEEEEY WD
Sbjct: 347 GDNILSGQRNG----HGFPKV-----SPPNLQPSNNIGSKKGVLVNKSWKNSEEEEYMWD 397
Query: 347 GMNSRVANPGKS-----NSSSKRDPRSQ 415
G+NS++A PGKS SKRDPRSQ
Sbjct: 398 GINSQLAVPGKSGGGGGGGGSKRDPRSQ 425