BLASTX nr result
ID: Chrysanthemum21_contig00026695
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00026695
(785 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KVH94777.1| Transcription elongation factor, TFIIS/CRSP70, N-... 115 2e-26
ref|XP_023731623.1| probable mediator of RNA polymerase II trans... 103 4e-22
ref|XP_023731622.1| probable mediator of RNA polymerase II trans... 103 5e-22
ref|XP_023731621.1| probable mediator of RNA polymerase II trans... 103 6e-22
ref|XP_023731620.1| probable mediator of RNA polymerase II trans... 103 7e-22
ref|XP_021988782.1| probable mediator of RNA polymerase II trans... 103 8e-22
ref|XP_021988781.1| probable mediator of RNA polymerase II trans... 103 1e-21
ref|XP_023741295.1| probable mediator of RNA polymerase II trans... 99 5e-20
ref|XP_021971012.1| probable mediator of RNA polymerase II trans... 96 5e-19
ref|XP_022001389.1| probable mediator of RNA polymerase II trans... 90 9e-17
gb|PLY75501.1| hypothetical protein LSAT_9X32260 [Lactuca sativa] 88 2e-16
gb|KVI03400.1| Transcription elongation factor, TFIIS/CRSP70, N-... 87 8e-16
ref|XP_019458617.1| PREDICTED: probable mediator of RNA polymera... 86 2e-15
gb|KDO53643.1| hypothetical protein CISIN_1g012904mg [Citrus sin... 86 3e-15
ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymera... 86 3e-15
ref|XP_006430523.1| probable mediator of RNA polymerase II trans... 86 3e-15
gb|KDO53642.1| hypothetical protein CISIN_1g012904mg [Citrus sin... 86 3e-15
ref|XP_006576774.1| PREDICTED: probable mediator of RNA polymera... 86 3e-15
dbj|GAY43676.1| hypothetical protein CUMW_076320 [Citrus unshiu] 85 4e-15
ref|XP_019437086.1| PREDICTED: probable mediator of RNA polymera... 85 5e-15
>gb|KVH94777.1| Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
[Cynara cardunculus var. scolymus]
Length = 363
Score = 115 bits (288), Expect = 2e-26
Identities = 56/70 (80%), Positives = 60/70 (85%)
Frame = +2
Query: 92 WKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFYPQASLELFDQ 271
WK MVD+WVMAT+K V EATPES+NPSVLDEE EGL SPPLDDLAFFYPQ SLEL +
Sbjct: 188 WKYMVDQWVMATEKAAAVSEATPESLNPSVLDEEEEGLPSPPLDDLAFFYPQTSLEL-SE 246
Query: 272 FFDGMDEYGS 301
FFDGMDEYGS
Sbjct: 247 FFDGMDEYGS 256
>ref|XP_023731623.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X4 [Lactuca sativa]
Length = 380
Score = 103 bits (258), Expect = 4e-22
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
Frame = +2
Query: 83 LSTWKNMVDEWVMATKKTVVVFEATPESINPSVLD-----EEGEGLLSPPLDDLAFFYPQ 247
+ WK MVDEWV+A +K VV EATPES+NPSVLD EE EGL SPPLDDLAFFYP
Sbjct: 176 IEEWKVMVDEWVVAIEKPTVVSEATPESLNPSVLDEEVEGEEEEGLPSPPLDDLAFFYPH 235
Query: 248 ASLELFDQFFDGMDEYGS 301
+SLEL +FFDGMD+YG+
Sbjct: 236 SSLEL-SEFFDGMDDYGN 252
>ref|XP_023731622.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X3 [Lactuca sativa]
Length = 384
Score = 103 bits (258), Expect = 5e-22
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
Frame = +2
Query: 83 LSTWKNMVDEWVMATKKTVVVFEATPESINPSVLD-----EEGEGLLSPPLDDLAFFYPQ 247
+ WK MVDEWV+A +K VV EATPES+NPSVLD EE EGL SPPLDDLAFFYP
Sbjct: 176 IEEWKVMVDEWVVAIEKPTVVSEATPESLNPSVLDEEVEGEEEEGLPSPPLDDLAFFYPH 235
Query: 248 ASLELFDQFFDGMDEYGS 301
+SLEL +FFDGMD+YG+
Sbjct: 236 SSLEL-SEFFDGMDDYGN 252
>ref|XP_023731621.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X2 [Lactuca sativa]
Length = 413
Score = 103 bits (258), Expect = 6e-22
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
Frame = +2
Query: 83 LSTWKNMVDEWVMATKKTVVVFEATPESINPSVLD-----EEGEGLLSPPLDDLAFFYPQ 247
+ WK MVDEWV+A +K VV EATPES+NPSVLD EE EGL SPPLDDLAFFYP
Sbjct: 176 IEEWKVMVDEWVVAIEKPTVVSEATPESLNPSVLDEEVEGEEEEGLPSPPLDDLAFFYPH 235
Query: 248 ASLELFDQFFDGMDEYGS 301
+SLEL +FFDGMD+YG+
Sbjct: 236 SSLEL-SEFFDGMDDYGN 252
>ref|XP_023731620.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X1 [Lactuca sativa]
Length = 417
Score = 103 bits (258), Expect = 7e-22
Identities = 53/78 (67%), Positives = 61/78 (78%), Gaps = 5/78 (6%)
Frame = +2
Query: 83 LSTWKNMVDEWVMATKKTVVVFEATPESINPSVLD-----EEGEGLLSPPLDDLAFFYPQ 247
+ WK MVDEWV+A +K VV EATPES+NPSVLD EE EGL SPPLDDLAFFYP
Sbjct: 176 IEEWKVMVDEWVVAIEKPTVVSEATPESLNPSVLDEEVEGEEEEGLPSPPLDDLAFFYPH 235
Query: 248 ASLELFDQFFDGMDEYGS 301
+SLEL +FFDGMD+YG+
Sbjct: 236 SSLEL-SEFFDGMDDYGN 252
>ref|XP_021988782.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X2 [Helianthus annuus]
Length = 372
Score = 103 bits (256), Expect = 8e-22
Identities = 56/89 (62%), Positives = 66/89 (74%)
Frame = +2
Query: 35 LKGYTVVESSS*LAVPLSTWKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSP 214
L+ + + SS + WK +VDEWVMAT+KTVV EATP+S+NPSVLDEE EGL SP
Sbjct: 167 LRKHVSKDVSSIAKTLIEAWKILVDEWVMATEKTVVS-EATPDSLNPSVLDEE-EGLPSP 224
Query: 215 PLDDLAFFYPQASLELFDQFFDGMDEYGS 301
PLDDL F YP SLEL +FFDGMDEYG+
Sbjct: 225 PLDDLTFLYPHGSLEL-SEFFDGMDEYGN 252
>ref|XP_021988781.1| probable mediator of RNA polymerase II transcription subunit 26b
isoform X1 [Helianthus annuus]
gb|OTG11419.1| putative transcription factor IIS [Helianthus annuus]
Length = 402
Score = 103 bits (256), Expect = 1e-21
Identities = 56/89 (62%), Positives = 66/89 (74%)
Frame = +2
Query: 35 LKGYTVVESSS*LAVPLSTWKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSP 214
L+ + + SS + WK +VDEWVMAT+KTVV EATP+S+NPSVLDEE EGL SP
Sbjct: 167 LRKHVSKDVSSIAKTLIEAWKILVDEWVMATEKTVVS-EATPDSLNPSVLDEE-EGLPSP 224
Query: 215 PLDDLAFFYPQASLELFDQFFDGMDEYGS 301
PLDDL F YP SLEL +FFDGMDEYG+
Sbjct: 225 PLDDLTFLYPHGSLEL-SEFFDGMDEYGN 252
>ref|XP_023741295.1| probable mediator of RNA polymerase II transcription subunit 26b
[Lactuca sativa]
gb|PLY68067.1| hypothetical protein LSAT_7X61900 [Lactuca sativa]
Length = 481
Score = 99.4 bits (246), Expect = 5e-20
Identities = 54/76 (71%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = +2
Query: 77 VPLSTWKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFYPQA-S 253
V + WK MVDEWV AT K V V EATPES+NPSVLDEE EGL SPPLDDLAF P A S
Sbjct: 240 VLIEVWKRMVDEWVKATTK-VTVSEATPESMNPSVLDEE-EGLPSPPLDDLAFLNPHAMS 297
Query: 254 LELFDQFFDGMDEYGS 301
LEL ++FFDGMD+YG+
Sbjct: 298 LELSEKFFDGMDDYGN 313
>ref|XP_021971012.1| probable mediator of RNA polymerase II transcription subunit 26b
[Helianthus annuus]
gb|OTG36443.1| putative transcription elongation factor (TFIIS) family protein
[Helianthus annuus]
Length = 448
Score = 96.3 bits (238), Expect = 5e-19
Identities = 50/75 (66%), Positives = 60/75 (80%), Gaps = 1/75 (1%)
Frame = +2
Query: 83 LSTWKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFYPQA-SLE 259
+ WK+MVDEWV AT K + V E TPES+NPSV+DEE EGL SPPLDDLAF P + SLE
Sbjct: 218 IEVWKDMVDEWVNATSK-ITVSENTPESMNPSVVDEE-EGLPSPPLDDLAFLNPHSMSLE 275
Query: 260 LFDQFFDGMDEYGST 304
L ++FFDGMD+YG+T
Sbjct: 276 LSEKFFDGMDDYGNT 290
>ref|XP_022001389.1| probable mediator of RNA polymerase II transcription subunit 26b
[Helianthus annuus]
gb|OTG01865.1| putative transcription factor IIS [Helianthus annuus]
Length = 446
Score = 89.7 bits (221), Expect = 9e-17
Identities = 48/74 (64%), Positives = 57/74 (77%), Gaps = 1/74 (1%)
Frame = +2
Query: 83 LSTWKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFYPQA-SLE 259
+ WK MVDEWV AT K + V E TPES+NPSVLDEE EGL SPPLDDLAF P + SLE
Sbjct: 224 IEVWKEMVDEWVNATAK-MTVSENTPESMNPSVLDEE-EGLPSPPLDDLAFLNPHSISLE 281
Query: 260 LFDQFFDGMDEYGS 301
L ++FFD +D+YG+
Sbjct: 282 LSEKFFDDVDDYGN 295
>gb|PLY75501.1| hypothetical protein LSAT_9X32260 [Lactuca sativa]
Length = 382
Score = 88.2 bits (217), Expect = 2e-16
Identities = 45/65 (69%), Positives = 50/65 (76%), Gaps = 5/65 (7%)
Frame = +2
Query: 83 LSTWKNMVDEWVMATKKTVVVFEATPESINPSVLD-----EEGEGLLSPPLDDLAFFYPQ 247
+ WK MVDEWV+A +K VV EATPES+NPSVLD EE EGL SPPLDDLAFFYP
Sbjct: 176 IEEWKVMVDEWVVAIEKPTVVSEATPESLNPSVLDEEVEGEEEEGLPSPPLDDLAFFYPH 235
Query: 248 ASLEL 262
+SLEL
Sbjct: 236 SSLEL 240
>gb|KVI03400.1| Transcription elongation factor, TFIIS/CRSP70, N-terminal, sub-type
[Cynara cardunculus var. scolymus]
Length = 395
Score = 86.7 bits (213), Expect = 8e-16
Identities = 47/74 (63%), Positives = 56/74 (75%), Gaps = 1/74 (1%)
Frame = +2
Query: 83 LSTWKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFYPQA-SLE 259
+ WK MVDEWV AT K + + TPESINPSVLDEE +GL SPPLDDL+F P + SLE
Sbjct: 179 IEVWKGMVDEWVNATTK-IAASDDTPESINPSVLDEE-DGLPSPPLDDLSFLNPHSMSLE 236
Query: 260 LFDQFFDGMDEYGS 301
L +FFDGMD+YG+
Sbjct: 237 L-SEFFDGMDDYGN 249
>ref|XP_019458617.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Lupinus angustifolius]
ref|XP_019458618.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Lupinus angustifolius]
ref|XP_019458619.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Lupinus angustifolius]
gb|OIW03214.1| hypothetical protein TanjilG_21846 [Lupinus angustifolius]
Length = 452
Score = 85.9 bits (211), Expect = 2e-15
Identities = 40/74 (54%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +2
Query: 83 LSTWKNMVDEWVMATKKT-VVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFYPQASLE 259
+ WK +VDEWV AT T + E TP+S+NPSV+D+E EGL SPP+D+ AFF QA
Sbjct: 204 IDDWKELVDEWVRATPTTDIAASEGTPDSVNPSVVDDEEEGLPSPPMDEGAFFVAQAGSI 263
Query: 260 LFDQFFDGMDEYGS 301
QFFDG+D+YG+
Sbjct: 264 ELSQFFDGIDDYGN 277
>gb|KDO53643.1| hypothetical protein CISIN_1g012904mg [Citrus sinensis]
Length = 448
Score = 85.5 bits (210), Expect = 3e-15
Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 92 WKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFY-PQASLELFD 268
WK++VDEWV ATK + E TP+S+NPSV+DEE EGL SPPLD+LAFF P A +EL
Sbjct: 205 WKDLVDEWVNATK---AIAEGTPDSVNPSVVDEE-EGLPSPPLDELAFFTGPSAGIEL-S 259
Query: 269 QFFDGMDEYGS 301
QFFDGMD++G+
Sbjct: 260 QFFDGMDDFGN 270
>ref|XP_006482056.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Citrus sinensis]
Length = 448
Score = 85.5 bits (210), Expect = 3e-15
Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 92 WKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFY-PQASLELFD 268
WK++VDEWV ATK + E TP+S+NPSV+DEE EGL SPPLD+LAFF P A +EL
Sbjct: 205 WKDLVDEWVNATK---AIAEGTPDSVNPSVVDEE-EGLPSPPLDELAFFAGPSAGIEL-S 259
Query: 269 QFFDGMDEYGS 301
QFFDGMD++G+
Sbjct: 260 QFFDGMDDFGN 270
>ref|XP_006430523.1| probable mediator of RNA polymerase II transcription subunit 26b
[Citrus clementina]
gb|ESR43763.1| hypothetical protein CICLE_v10011717mg [Citrus clementina]
Length = 448
Score = 85.5 bits (210), Expect = 3e-15
Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 92 WKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFY-PQASLELFD 268
WK++VDEWV ATK + E TP+S+NPSV+DEE EGL SPPLD+LAFF P A +EL
Sbjct: 205 WKDLVDEWVNATK---AIAEGTPDSVNPSVVDEE-EGLPSPPLDELAFFAGPSAGIEL-S 259
Query: 269 QFFDGMDEYGS 301
QFFDGMD++G+
Sbjct: 260 QFFDGMDDFGN 270
>gb|KDO53642.1| hypothetical protein CISIN_1g012904mg [Citrus sinensis]
Length = 453
Score = 85.5 bits (210), Expect = 3e-15
Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 92 WKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFY-PQASLELFD 268
WK++VDEWV ATK + E TP+S+NPSV+DEE EGL SPPLD+LAFF P A +EL
Sbjct: 210 WKDLVDEWVNATK---AIAEGTPDSVNPSVVDEE-EGLPSPPLDELAFFTGPSAGIEL-S 264
Query: 269 QFFDGMDEYGS 301
QFFDGMD++G+
Sbjct: 265 QFFDGMDDFGN 275
>ref|XP_006576774.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b isoform X2 [Glycine max]
Length = 453
Score = 85.5 bits (210), Expect = 3e-15
Identities = 42/74 (56%), Positives = 52/74 (70%), Gaps = 1/74 (1%)
Frame = +2
Query: 83 LSTWKNMVDEWVMATKKTVVVFEATPESINPSVL-DEEGEGLLSPPLDDLAFFYPQASLE 259
++ WK MVDEWV AT T + E TP+S+NPSV+ D+E EGL SPPLD+ AFF QA
Sbjct: 203 INGWKEMVDEWVKATTTTAITEEGTPDSVNPSVVDDDEEEGLPSPPLDEGAFFVTQAGSM 262
Query: 260 LFDQFFDGMDEYGS 301
QFFDGMD+ G+
Sbjct: 263 ELSQFFDGMDDDGN 276
>dbj|GAY43676.1| hypothetical protein CUMW_076320 [Citrus unshiu]
Length = 458
Score = 85.1 bits (209), Expect = 4e-15
Identities = 45/71 (63%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Frame = +2
Query: 92 WKNMVDEWVMATKKTVVVFEATPESINPSVLDEEGEGLLSPPLDDLAFFY-PQASLELFD 268
WK++VDEWV ATK + E TP+S+NPSV+DEE EGL SPPLD+LAFF P A +EL
Sbjct: 213 WKDLVDEWVNATK-AIAGAEGTPDSVNPSVVDEE-EGLPSPPLDELAFFAGPSAGIEL-S 269
Query: 269 QFFDGMDEYGS 301
QFFDGMD++G+
Sbjct: 270 QFFDGMDDFGN 280
>ref|XP_019437086.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Lupinus angustifolius]
ref|XP_019437087.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Lupinus angustifolius]
ref|XP_019437088.1| PREDICTED: probable mediator of RNA polymerase II transcription
subunit 26b [Lupinus angustifolius]
gb|OIW15494.1| hypothetical protein TanjilG_32898 [Lupinus angustifolius]
Length = 455
Score = 84.7 bits (208), Expect = 5e-15
Identities = 42/91 (46%), Positives = 57/91 (62%), Gaps = 1/91 (1%)
Frame = +2
Query: 32 PLKGYTVVESSS*LAVPLSTWKNMVDEWVMATKKTVVVF-EATPESINPSVLDEEGEGLL 208
PL+ + + E + WK MVDEWV AT + E TP+S+NPSV+D++ EGL
Sbjct: 190 PLRKHGLNEIRQLARTLIGEWKEMVDEWVKATSSAALAASEGTPDSVNPSVVDDDEEGLP 249
Query: 209 SPPLDDLAFFYPQASLELFDQFFDGMDEYGS 301
SPP+D+ AFF QA QFFDG+D+YG+
Sbjct: 250 SPPMDEGAFFVTQAGSIELSQFFDGIDDYGN 280