BLASTX nr result

ID: Chrysanthemum21_contig00026547 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00026547
         (1135 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_017222748.1| PREDICTED: uncharacterized protein LOC108199...    65   5e-08
ref|XP_021990486.1| transcription initiation factor TFIID subuni...    59   6e-06

>ref|XP_017222748.1| PREDICTED: uncharacterized protein LOC108199448 isoform X2 [Daucus
           carota subsp. sativus]
 ref|XP_017222749.1| PREDICTED: uncharacterized protein LOC108199448 isoform X2 [Daucus
           carota subsp. sativus]
          Length = 353

 Score = 65.5 bits (158), Expect = 5e-08
 Identities = 28/43 (65%), Positives = 35/43 (81%)
 Frame = -3

Query: 161 YFNALDLTGFSGYRMRAGSASPDRRRNGSREYSPDYENSVSPP 33
           YFN+LD+TGFSGYR+RAGSASP RRR   R YSP++++   PP
Sbjct: 7   YFNSLDITGFSGYRVRAGSASPVRRRTTERRYSPEFDHQNGPP 49


>ref|XP_021990486.1| transcription initiation factor TFIID subunit 15b isoform X2
           [Helianthus annuus]
          Length = 332

 Score = 58.9 bits (141), Expect = 6e-06
 Identities = 27/37 (72%), Positives = 29/37 (78%)
 Frame = -3

Query: 143 LTGFSGYRMRAGSASPDRRRNGSREYSPDYENSVSPP 33
           L GFSGYRMRAGS SP RRRNGS  YSPDY++S   P
Sbjct: 21  LDGFSGYRMRAGSVSPVRRRNGSHHYSPDYDHSDGAP 57


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