BLASTX nr result

ID: Chrysanthemum21_contig00026528 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00026528
         (937 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_999776.1| spicule matrix protein SM37 precursor [Strongyl...    59   4e-06

>ref|NP_999776.1| spicule matrix protein SM37 precursor [Strongylocentrotus
           purpuratus]
 gb|AAC33762.1| spicule matrix protein precursor [Strongylocentrotus purpuratus]
          Length = 381

 Score = 58.9 bits (141), Expect = 4e-06
 Identities = 44/105 (41%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
 Frame = +1

Query: 28  PNAQGFGQAGTGFNWNQNAQAFAPAGTGFNWNQNAQAFAPAGTGSNWNQNAQVFGEAGQG 207
           PN      AG G  WN N  A A AG G  WN N  A A AG G  WN N Q  G  G G
Sbjct: 274 PNQGAGAGAGAGGRWNPNQGAGAGAGAGGRWNPNQGAGAGAGAGGRWNPN-QGAGAGGAG 332

Query: 208 AGGFPTPPSSSFFDGVSHHQSPQ-VGTHLFDQPTPHSRTPMPQQG 339
           AGG+   P+     G  + Q+PQ  G      P   SR  M QQG
Sbjct: 333 AGGW--NPNQGAGAGRWNPQTPQNPGQGGRWNPQNPSRPRMYQQG 375


Top