BLASTX nr result

ID: Chrysanthemum21_contig00026525 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00026525
         (356 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023754248.1| ATP-dependent helicase BRM-like [Lactuca sat...    78   3e-14
gb|KVH97273.1| Bromodomain-containing protein [Cynara cardunculu...    73   2e-12
gb|PLY76142.1| hypothetical protein LSAT_4X35861 [Lactuca sativa]      69   3e-11
ref|XP_023730730.1| ATP-dependent helicase BRM [Lactuca sativa]        69   3e-11

>ref|XP_023754248.1| ATP-dependent helicase BRM-like [Lactuca sativa]
 gb|PLY92722.1| hypothetical protein LSAT_7X4220 [Lactuca sativa]
          Length = 2016

 Score = 77.8 bits (190), Expect = 3e-14
 Identities = 54/110 (49%), Positives = 65/110 (59%), Gaps = 14/110 (12%)
 Frame = -1

Query: 290 TNPRQ-TMPGGHLGSTSSPLLVSHSXXXXXXXXXXXXXPRQLTPVNSG---MSSMHPPQS 123
           T PRQ TMP GHLGSTS+PLLV+++               Q  P+  G   +SSM PPQS
Sbjct: 254 TKPRQQTMPPGHLGSTSNPLLVNNANPGQG----------QQLPLRQGSGVLSSMQPPQS 303

Query: 122 SMNVN------HQMNRSSPQ-TPASNSL---PSQKGQTLQKKPHSAFSKQ 3
           SM +N       QMNRSSPQ T +SNS     +QKGQ  Q+ PHS F+KQ
Sbjct: 304 SMGMNQSMLTGQQMNRSSPQPTASSNSAGPPNAQKGQVSQRGPHSGFTKQ 353


>gb|KVH97273.1| Bromodomain-containing protein [Cynara cardunculus var. scolymus]
          Length = 2040

 Score = 72.8 bits (177), Expect = 2e-12
 Identities = 57/155 (36%), Positives = 71/155 (45%), Gaps = 38/155 (24%)
 Frame = -1

Query: 353 ITNENSPRXXXXXXXXXXXXSTNPRQTMPGGHLG-STSSPLLVSHSXXXXXXXXXXXXXP 177
           + NE+SPR            ST  RQT+  GH+G ST + +LV++S              
Sbjct: 277 VANESSPRGNSSSDVSGHSGSTKARQTLSPGHVGGSTPNAMLVNNSSVSQGQQFPTHGRE 336

Query: 176 RQLTP----VN-SGMSSMHPPQSSMNVNH-------------------------QMNRSS 87
            QL P    +N SGMSSM PPQS  N+N                           MNRSS
Sbjct: 337 NQLPPRQPTINGSGMSSMPPPQSPANMNQGSDHLLLGKSMLSGSDSLQIQHARQHMNRSS 396

Query: 86  PQTPAS-------NSLPSQKGQTLQKKPHSAFSKQ 3
           PQ+ AS       N+LPSQKGQ  Q +PH  F+KQ
Sbjct: 397 PQSAASSNDNGLENALPSQKGQMPQAQPHPGFTKQ 431


>gb|PLY76142.1| hypothetical protein LSAT_4X35861 [Lactuca sativa]
          Length = 476

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 55/145 (37%), Positives = 65/145 (44%), Gaps = 28/145 (19%)
 Frame = -1

Query: 353 ITNENSPRXXXXXXXXXXXXSTNPRQTMPGGHLGSTSSPLLVSHSXXXXXXXXXXXXXPR 174
           +TNENSPR             T  RQTM  GHLGSTS+    +                 
Sbjct: 296 LTNENSPRSDVSGHSGS----TKARQTMSPGHLGSTSN----ASQGQGQQFPIHGRENMN 347

Query: 173 QLTP-------VNSGMSSMHPPQSSMNVN-------------HQMNRSSPQTPAS----- 69
           QL P       + SG+SSM PPQS  N++              QMNRSSPQ PA+     
Sbjct: 348 QLPPRQPTNNGIGSGVSSMPPPQSPANMSLGPDHLLQLQHARQQMNRSSPQPPAASANGV 407

Query: 68  ---NSLPSQKGQTLQKKPHSAFSKQ 3
              N L SQK QT Q +PH  F+KQ
Sbjct: 408 GLENPLTSQKQQTPQGQPHPGFTKQ 432


>ref|XP_023730730.1| ATP-dependent helicase BRM [Lactuca sativa]
          Length = 2105

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 55/145 (37%), Positives = 65/145 (44%), Gaps = 28/145 (19%)
 Frame = -1

Query: 353 ITNENSPRXXXXXXXXXXXXSTNPRQTMPGGHLGSTSSPLLVSHSXXXXXXXXXXXXXPR 174
           +TNENSPR             T  RQTM  GHLGSTS+    +                 
Sbjct: 296 LTNENSPRSDVSGHSGS----TKARQTMSPGHLGSTSN----ASQGQGQQFPIHGRENMN 347

Query: 173 QLTP-------VNSGMSSMHPPQSSMNVN-------------HQMNRSSPQTPAS----- 69
           QL P       + SG+SSM PPQS  N++              QMNRSSPQ PA+     
Sbjct: 348 QLPPRQPTNNGIGSGVSSMPPPQSPANMSLGPDHLLQLQHARQQMNRSSPQPPAASANGV 407

Query: 68  ---NSLPSQKGQTLQKKPHSAFSKQ 3
              N L SQK QT Q +PH  F+KQ
Sbjct: 408 GLENPLTSQKQQTPQGQPHPGFTKQ 432


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