BLASTX nr result
ID: Chrysanthemum21_contig00026368
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00026368
(448 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_023754494.1| protein WHAT'S THIS FACTOR 1 homolog [Lactuc... 84 4e-16
gb|KVH91103.1| Plant organelle RNA recognition domain-containing... 82 2e-15
ref|XP_021994865.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Heliant... 64 4e-09
gb|PON76552.1| Plant organelle RNA recognition domain containing... 61 5e-08
dbj|GAV84327.1| PORR domain-containing protein [Cephalotus folli... 60 2e-07
ref|XP_019179634.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 59 2e-07
ref|XP_021688223.1| protein ROOT PRIMORDIUM DEFECTIVE 1-like [He... 59 3e-07
ref|XP_002281157.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 59 3e-07
emb|CBI40500.3| unnamed protein product, partial [Vitis vinifera] 59 3e-07
emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera] 59 3e-07
ref|XP_021612025.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Manihot... 59 4e-07
ref|XP_019440429.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 58 8e-07
ref|XP_003626564.1| plant organelle RNA recognition domain prote... 58 8e-07
ref|XP_023514273.1| protein WHAT'S THIS FACTOR 1 homolog [Cucurb... 57 1e-06
ref|XP_015888696.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 57 2e-06
ref|XP_021756260.1| protein ROOT PRIMORDIUM DEFECTIVE 1-like [Ch... 56 3e-06
ref|XP_021279502.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Herrani... 56 3e-06
ref|XP_017979173.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE... 56 3e-06
gb|EOX95740.1| Ubiquitin carboxyl-terminal hydrolase family prot... 56 3e-06
gb|KHF99524.1| hypothetical protein F383_20291 [Gossypium arboreum] 56 4e-06
>ref|XP_023754494.1| protein WHAT'S THIS FACTOR 1 homolog [Lactuca sativa]
gb|PLY92537.1| hypothetical protein LSAT_3X139581 [Lactuca sativa]
Length = 496
Score = 84.3 bits (207), Expect = 4e-16
Identities = 50/86 (58%), Positives = 58/86 (67%), Gaps = 12/86 (13%)
Frame = -1
Query: 223 MTSSLTTLPFFISHKTSLSQQPSSQLYK---------KTTPFLGNDLNLK---FGGEFRK 80
M SSLTTLPFFI H+TS Q+P L + TPFLG LNL+ FGG F K
Sbjct: 1 MASSLTTLPFFILHQTSRIQKPRFSLENPVSVSKTPLEKTPFLGKSLNLQAGSFGGNFGK 60
Query: 79 ITNVRVTPIRAIVKRRKELPFDNVIQ 2
+VR++PI+AIVKRRKELPFDNVIQ
Sbjct: 61 -NHVRISPIQAIVKRRKELPFDNVIQ 85
>gb|KVH91103.1| Plant organelle RNA recognition domain-containing protein [Cynara
cardunculus var. scolymus]
Length = 494
Score = 82.4 bits (202), Expect = 2e-15
Identities = 49/86 (56%), Positives = 57/86 (66%), Gaps = 12/86 (13%)
Frame = -1
Query: 223 MTSSLTTLPFFISHKTSLSQQPSSQLYKKT---------TPFLGNDLNLK---FGGEFRK 80
M SS+TTLPFFISHKTS Q+P L T F G LNL+ FGGEFRK
Sbjct: 1 MASSITTLPFFISHKTSPIQKPRFSLENSVLISKGPSEKTAFWGKTLNLQVGSFGGEFRK 60
Query: 79 ITNVRVTPIRAIVKRRKELPFDNVIQ 2
++R +PI+A+VKRRKELPFDNVIQ
Sbjct: 61 -NHLRFSPIQALVKRRKELPFDNVIQ 85
>ref|XP_021994865.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Helianthus annuus]
gb|OTG09447.1| putative ubiquitin carboxyl-terminal hydrolase family protein
[Helianthus annuus]
Length = 474
Score = 64.3 bits (155), Expect = 4e-09
Identities = 41/79 (51%), Positives = 49/79 (62%), Gaps = 5/79 (6%)
Frame = -1
Query: 223 MTSSLTTLPFFISH---KTSLSQQPSSQLYKKTTPFLGNDLNLKFGG--EFRKITNVRVT 59
M SSLTTLPFFISH K +LS P S F G+ LN F+ +VR +
Sbjct: 1 MASSLTTLPFFISHPIQKPTLSFHPPS--------FWGDPLNFNNSQTLSFQTKKHVRFS 52
Query: 58 PIRAIVKRRKELPFDNVIQ 2
P++A+VKRRKELPFDNVIQ
Sbjct: 53 PVQALVKRRKELPFDNVIQ 71
>gb|PON76552.1| Plant organelle RNA recognition domain containing protein [Trema
orientalis]
Length = 527
Score = 61.2 bits (147), Expect = 5e-08
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 12/81 (14%)
Frame = -1
Query: 208 TTLPFFISHKTSLSQQPS---------SQLYKKTTPFLGNDLNLKFGGEFRKI---TNVR 65
++LPFF+S+KTS + P S + + +PFLG L L+ F + TNV
Sbjct: 16 SSLPFFVSYKTSFLRTPKDSVKSHFSVSSIQPEKSPFLGKSLVLQEKNGFLRNPRKTNVP 75
Query: 64 VTPIRAIVKRRKELPFDNVIQ 2
PIRA+VKRRKELP DNVIQ
Sbjct: 76 FGPIRAVVKRRKELPLDNVIQ 96
>dbj|GAV84327.1| PORR domain-containing protein [Cephalotus follicularis]
Length = 528
Score = 59.7 bits (143), Expect = 2e-07
Identities = 43/87 (49%), Positives = 51/87 (58%), Gaps = 14/87 (16%)
Frame = -1
Query: 220 TSSLTTLPFFISHKTSLSQQP----------SSQLYKKTTPFLGNDLNLK----FGGEFR 83
TS T+LPF +S+K+ L QP SS+L +KT PFLGN L L + G R
Sbjct: 12 TSLFTSLPFSLSYKSHLLNQPNVYVKPHVVASSKLSQKT-PFLGNSLVLHHKNGYLGNTR 70
Query: 82 KITNVRVTPIRAIVKRRKELPFDNVIQ 2
K + PIRA VKRRKELPFD VIQ
Sbjct: 71 K-NHFPFEPIRAAVKRRKELPFDKVIQ 96
>ref|XP_019179634.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ipomoea nil]
Length = 533
Score = 59.3 bits (142), Expect = 2e-07
Identities = 41/91 (45%), Positives = 51/91 (56%), Gaps = 16/91 (17%)
Frame = -1
Query: 226 KMTSSLTTLPFFISHKTSLSQQP----------SSQLYKKTTPFLGNDLNLKFGGE---- 89
K T PF +S+K+SL Q+P S Q +KT+ FLG L FGG+
Sbjct: 11 KFTPCYGAFPFCLSYKSSLLQKPRLPLAAQLSVSRQELEKTS-FLGKSLG--FGGKIESL 67
Query: 88 --FRKITNVRVTPIRAIVKRRKELPFDNVIQ 2
FRK + ++PIRA VKRRKELP DNVIQ
Sbjct: 68 GSFRKTPRLPISPIRAAVKRRKELPLDNVIQ 98
>ref|XP_021688223.1| protein ROOT PRIMORDIUM DEFECTIVE 1-like [Hevea brasiliensis]
Length = 526
Score = 58.9 bits (141), Expect = 3e-07
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 14/86 (16%)
Frame = -1
Query: 217 SSLTTLPFFISHKTSLSQQP---------SSQLYKKTTPFLGNDL-----NLKFGGEFRK 80
S T+LPFF+S+K++ ++P +S + + FLG L N FG RK
Sbjct: 13 SPSTSLPFFLSYKSNFLEKPKLYFKSHFSTSTFQLEKSQFLGKSLVFQEKNGPFGSTLRK 72
Query: 79 ITNVRVTPIRAIVKRRKELPFDNVIQ 2
T+ P+RA+VKRRKELPFDNVIQ
Sbjct: 73 -THSPFEPVRAVVKRRKELPFDNVIQ 97
>ref|XP_002281157.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Vitis vinifera]
Length = 528
Score = 58.9 bits (141), Expect = 3e-07
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 13/85 (15%)
Frame = -1
Query: 217 SSLTTLPFFISHKTSLSQQPSSQL---------YKKTTPFLGNDLNLKFGGE----FRKI 77
S T LPFF+S K+S ++P + + + TPFLG L L+ + RK
Sbjct: 13 SPSTVLPFFLSCKSSFFEKPKVSVKSHLSFTPNHTQKTPFLGGSLVLRERVDCLRNLRK- 71
Query: 76 TNVRVTPIRAIVKRRKELPFDNVIQ 2
T+V V PIRA VKRRKELPFDNV+Q
Sbjct: 72 THVPVGPIRAAVKRRKELPFDNVVQ 96
>emb|CBI40500.3| unnamed protein product, partial [Vitis vinifera]
Length = 1133
Score = 58.9 bits (141), Expect = 3e-07
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 13/85 (15%)
Frame = -1
Query: 217 SSLTTLPFFISHKTSLSQQPSSQL---------YKKTTPFLGNDLNLKFGGE----FRKI 77
S T LPFF+S K+S ++P + + + TPFLG L L+ + RK
Sbjct: 10 SPSTVLPFFLSCKSSFFEKPKVSVKSHLSFTPNHTQKTPFLGGSLVLRERVDCLRNLRK- 68
Query: 76 TNVRVTPIRAIVKRRKELPFDNVIQ 2
T+V V PIRA VKRRKELPFDNV+Q
Sbjct: 69 THVPVGPIRAAVKRRKELPFDNVVQ 93
>emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
Length = 1408
Score = 58.9 bits (141), Expect = 3e-07
Identities = 39/85 (45%), Positives = 50/85 (58%), Gaps = 13/85 (15%)
Frame = -1
Query: 217 SSLTTLPFFISHKTSLSQQPSSQL---------YKKTTPFLGNDLNLKFGGE----FRKI 77
S T LPFF+S K+S ++P + + + TPFLG L L+ + RK
Sbjct: 13 SPSTVLPFFLSCKSSFFEKPKVSVKSHLSFTPNHTQKTPFLGGSLVLRERVDCLRNLRK- 71
Query: 76 TNVRVTPIRAIVKRRKELPFDNVIQ 2
T+V V PIRA VKRRKELPFDNV+Q
Sbjct: 72 THVPVGPIRAAVKRRKELPFDNVVQ 96
>ref|XP_021612025.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Manihot esculenta]
gb|OAY62178.1| hypothetical protein MANES_01G247400 [Manihot esculenta]
Length = 526
Score = 58.5 bits (140), Expect = 4e-07
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 14/86 (16%)
Frame = -1
Query: 217 SSLTTLPFFISHKTSLSQQP---------SSQLYKKTTPFLGNDL-----NLKFGGEFRK 80
S T+LPFF+S K++ ++P +S ++ + FLG L N FG RK
Sbjct: 13 SPSTSLPFFLSCKSNFLEKPKLYFKSHLSTSTFQRQKSQFLGKSLVFQEKNGPFGSTMRK 72
Query: 79 ITNVRVTPIRAIVKRRKELPFDNVIQ 2
T+ P+RA+VKRRKELPFDNVIQ
Sbjct: 73 -THSPFEPVRAVVKRRKELPFDNVIQ 97
>ref|XP_019440429.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1-like [Lupinus
angustifolius]
gb|OIW13578.1| hypothetical protein TanjilG_25677 [Lupinus angustifolius]
Length = 524
Score = 57.8 bits (138), Expect = 8e-07
Identities = 42/88 (47%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Frame = -1
Query: 226 KMTSSLTTLPFFISH------KTSLSQQPSSQLYKKTTPFLGNDLNLKFGGE-------F 86
K++S T LPFFIS+ K +LS +P S L K + F G L L G
Sbjct: 11 KISSFSTPLPFFISNQLPFLLKPTLSFKPHSSLQK--SQFFGTSLVLSQLGNSNVDFISL 68
Query: 85 RKITNVRVTPIRAIVKRRKELPFDNVIQ 2
RK NV PIR+ VKRRKELPFDNVIQ
Sbjct: 69 RKKLNVPFGPIRSAVKRRKELPFDNVIQ 96
>ref|XP_003626564.1| plant organelle RNA recognition domain protein [Medicago
truncatula]
gb|AES82782.1| plant organelle RNA recognition domain protein [Medicago
truncatula]
Length = 530
Score = 57.8 bits (138), Expect = 8e-07
Identities = 38/80 (47%), Positives = 46/80 (57%), Gaps = 7/80 (8%)
Frame = -1
Query: 220 TSSLTTLPFFISHKTSLSQQPSSQLYK----KTTPFLGNDLNLKFGGEFRKITNVR---V 62
+SS T LPFFIS+K Q+P+ L K + FLG +L L F + R +
Sbjct: 19 SSSFTPLPFFISNKLHFLQKPNFSLKLHSSLKKSQFLGTNLRL-FQSNSSHVGGTRFNKI 77
Query: 61 TPIRAIVKRRKELPFDNVIQ 2
PI A VKRRKELPFDNVIQ
Sbjct: 78 MPISAAVKRRKELPFDNVIQ 97
>ref|XP_023514273.1| protein WHAT'S THIS FACTOR 1 homolog [Cucurbita pepo subsp. pepo]
Length = 513
Score = 57.0 bits (136), Expect = 1e-06
Identities = 34/74 (45%), Positives = 46/74 (62%), Gaps = 6/74 (8%)
Frame = -1
Query: 205 TLPFFISHKTSLSQQPSSQLYKKTTPFLGNDLNLK------FGGEFRKITNVRVTPIRAI 44
++PF + H+ + PSS + + F G +L+L+ FG + RK + V PIRAI
Sbjct: 17 SIPFVLPHRGYFFENPSSSVKSQ---FWGKNLDLRHRNDGFFGSDLRK-SRVPFQPIRAI 72
Query: 43 VKRRKELPFDNVIQ 2
VKRRKELPFDNVIQ
Sbjct: 73 VKRRKELPFDNVIQ 86
>ref|XP_015888696.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Ziziphus jujuba]
Length = 524
Score = 56.6 bits (135), Expect = 2e-06
Identities = 35/85 (41%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Frame = -1
Query: 220 TSSLTTLPFFISHKTSLSQQPS---------SQLYKKTTPFLGNDLNLK---FGGEFRKI 77
T+S T+LPFF+S+K+ Q+P S + + + F GN L L+ +
Sbjct: 12 TTSSTSLPFFLSYKSPFLQKPKFSVKSPLSISTIQAEKSQFWGNSLVLQDRNVASSNLIV 71
Query: 76 TNVRVTPIRAIVKRRKELPFDNVIQ 2
++ PIRA VKRRKELPFDNVIQ
Sbjct: 72 NHLSFRPIRAAVKRRKELPFDNVIQ 96
>ref|XP_021756260.1| protein ROOT PRIMORDIUM DEFECTIVE 1-like [Chenopodium quinoa]
Length = 530
Score = 56.2 bits (134), Expect = 3e-06
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 12/85 (14%)
Frame = -1
Query: 220 TSSLTTLPFFISHKTSLSQQP---------SSQLYKKTTPFLGNDLNL---KFGGEFRKI 77
T+ +P F+S KT++ + P SS ++ FLG L L +FG +
Sbjct: 12 TTQSVQIPLFLSCKTTIPKNPIFIPKPHFYSSVKSSLSSSFLGQSLILGQDEFGFCRNRK 71
Query: 76 TNVRVTPIRAIVKRRKELPFDNVIQ 2
T+V + PIRA+VKRRKELPFDNV+Q
Sbjct: 72 THVPICPIRAVVKRRKELPFDNVVQ 96
>ref|XP_021279502.1| protein ROOT PRIMORDIUM DEFECTIVE 1 [Herrania umbratica]
Length = 530
Score = 56.2 bits (134), Expect = 3e-06
Identities = 37/87 (42%), Positives = 48/87 (55%), Gaps = 14/87 (16%)
Frame = -1
Query: 220 TSSLTTLPFFISHKTSLSQQP---------SSQLYKKTTPFLGNDLNLKFGGEFRKITNV 68
+S T+ P F+S+K S +P SS + + TPFLG L + +F + N+
Sbjct: 12 SSMSTSFPLFLSYKFSFHGKPQLSMKSHLHSSTKFPEKTPFLGQSLVFQ-DKDFTSLGNL 70
Query: 67 RVT-----PIRAIVKRRKELPFDNVIQ 2
T PIRA VKRRKELPFDNVIQ
Sbjct: 71 NKTHVPFEPIRAAVKRRKELPFDNVIQ 97
>ref|XP_017979173.1| PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Theobroma cacao]
Length = 530
Score = 56.2 bits (134), Expect = 3e-06
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 14/86 (16%)
Frame = -1
Query: 217 SSLTTLPFFISHKTSLSQQP---------SSQLYKKTTPFLGNDLNLKFGGEFRKITNVR 65
S T+LP F+S+K+ +P SS + + TPFLG L + +F + N+
Sbjct: 13 SMSTSLPLFLSYKSPFHGKPQLSMKSHFRSSTKFPEKTPFLGQSLVFQ-DKDFTSLGNLN 71
Query: 64 VT-----PIRAIVKRRKELPFDNVIQ 2
T P+RA VKRRKELPFDNVIQ
Sbjct: 72 KTHVPFEPVRAAVKRRKELPFDNVIQ 97
>gb|EOX95740.1| Ubiquitin carboxyl-terminal hydrolase family protein [Theobroma
cacao]
Length = 706
Score = 56.2 bits (134), Expect = 3e-06
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 14/86 (16%)
Frame = -1
Query: 217 SSLTTLPFFISHKTSLSQQP---------SSQLYKKTTPFLGNDLNLKFGGEFRKITNVR 65
S T+LP F+S+K+ +P SS + + TPFLG L + +F + N+
Sbjct: 13 SMSTSLPLFLSYKSPFHGKPQLSMKSHFRSSTKFPEKTPFLGQSLVFQ-DKDFTSLGNLN 71
Query: 64 VT-----PIRAIVKRRKELPFDNVIQ 2
T P+RA VKRRKELPFDNVIQ
Sbjct: 72 KTHVPFEPVRAAVKRRKELPFDNVIQ 97
>gb|KHF99524.1| hypothetical protein F383_20291 [Gossypium arboreum]
Length = 504
Score = 55.8 bits (133), Expect = 4e-06
Identities = 36/82 (43%), Positives = 47/82 (57%), Gaps = 14/82 (17%)
Frame = -1
Query: 205 TLPFFISHKTSLSQQPS---------SQLYKKTTPFLGNDLNLKFG-----GEFRKITNV 68
+ P F+S+K+S ++P S+ + TPF G L L+ G RK T+V
Sbjct: 17 SFPLFLSYKSSFHEKPKISRKSHFHPSKGVPEKTPFFGRSLVLQDKAFTSLGNLRK-THV 75
Query: 67 RVTPIRAIVKRRKELPFDNVIQ 2
PIRA+VKRRKELPFDNVIQ
Sbjct: 76 PFEPIRAVVKRRKELPFDNVIQ 97