BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00026336
         (535 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022009994.1| DNA repair protein RAD4 [Helianthus annuus] ...    54   7e-10
ref|XP_023735483.1| DNA repair protein RAD4 [Lactuca sativa]           45   1e-06
gb|PLY72435.1| hypothetical protein LSAT_2X69340 [Lactuca sativa]      45   1e-06
gb|KVI08621.1| DNA repair protein Rad4 [Cynara cardunculus var. ...    42   3e-06

>ref|XP_022009994.1| DNA repair protein RAD4 [Helianthus annuus]
 gb|OTF98354.1| putative DNA repair protein Rad4 family [Helianthus annuus]
          Length = 907

 Score = 54.3 bits (129), Expect(2) = 7e-10
 Identities = 29/42 (69%), Positives = 32/42 (76%)
 Frame = -1

Query: 475 ATERTERTSVINEDNVKKIERMYLEDMEMETKALTEPLPTNQ 350
           ATE T  T     +NVK+ ER YLEDME+ETKALTEPLPTNQ
Sbjct: 552 ATEGTSGTP----NNVKREERTYLEDMELETKALTEPLPTNQ 589



 Score = 36.6 bits (83), Expect(2) = 7e-10
 Identities = 17/24 (70%), Positives = 20/24 (83%)
 Frame = -2

Query: 534 KSHKIASH*VDSTWRDGVLQPLKE 463
           K +KIASH V+STW D VL+PLKE
Sbjct: 524 KWYKIASHRVNSTWWDAVLRPLKE 547


>ref|XP_023735483.1| DNA repair protein RAD4 [Lactuca sativa]
          Length = 882

 Score = 44.7 bits (104), Expect(2) = 1e-06
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -1

Query: 436 DNVKKIERMYLEDMEMETKALTEPLPTNQ 350
           DN++  ER  LEDME+ETKALTEPLPTNQ
Sbjct: 544 DNLRN-ERASLEDMELETKALTEPLPTNQ 571



 Score = 35.0 bits (79), Expect(2) = 1e-06
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -2

Query: 534 KSHKIASH*VDSTWRDGVLQPLKEQKER 451
           K +KIASH V+STW D VL PLK+ + +
Sbjct: 508 KWYKIASHRVNSTWWDAVLAPLKDLESK 535


>gb|PLY72435.1| hypothetical protein LSAT_2X69340 [Lactuca sativa]
          Length = 846

 Score = 44.7 bits (104), Expect(2) = 1e-06
 Identities = 22/29 (75%), Positives = 25/29 (86%)
 Frame = -1

Query: 436 DNVKKIERMYLEDMEMETKALTEPLPTNQ 350
           DN++  ER  LEDME+ETKALTEPLPTNQ
Sbjct: 508 DNLRN-ERASLEDMELETKALTEPLPTNQ 535



 Score = 35.0 bits (79), Expect(2) = 1e-06
 Identities = 16/28 (57%), Positives = 21/28 (75%)
 Frame = -2

Query: 534 KSHKIASH*VDSTWRDGVLQPLKEQKER 451
           K +KIASH V+STW D VL PLK+ + +
Sbjct: 472 KWYKIASHRVNSTWWDAVLAPLKDLESK 499


>gb|KVI08621.1| DNA repair protein Rad4 [Cynara cardunculus var. scolymus]
          Length = 1090

 Score = 41.6 bits (96), Expect(2) = 3e-06
 Identities = 19/22 (86%), Positives = 20/22 (90%)
 Frame = -1

Query: 415 RMYLEDMEMETKALTEPLPTNQ 350
           R  LEDME+ETKALTEPLPTNQ
Sbjct: 753 RTSLEDMELETKALTEPLPTNQ 774



 Score = 37.0 bits (84), Expect(2) = 3e-06
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = -2

Query: 534 KSHKIASH*VDSTWRDGVLQPLKEQKER 451
           K + IASH VDSTW D VL+PLKE + R
Sbjct: 689 KWYMIASHRVDSTWWDTVLRPLKELESR 716