BLASTX nr result

ID: Chrysanthemum21_contig00025958 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00025958
         (367 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI09008.1| BRCT domain-containing protein [Cynara cardunculu...    77   8e-14
ref|XP_022005351.1| E3 ubiquitin-protein ligase CHFR isoform X2 ...    69   4e-11
ref|XP_022005350.1| E3 ubiquitin-protein ligase CHFR isoform X1 ...    69   4e-11

>gb|KVI09008.1| BRCT domain-containing protein [Cynara cardunculus var. scolymus]
          Length = 491

 Score = 76.6 bits (187), Expect = 8e-14
 Identities = 50/117 (42%), Positives = 65/117 (55%), Gaps = 3/117 (2%)
 Frame = +1

Query: 4   SFSKNRVIDIEFXXXXXXXWTRSSLLKENLLPNERRNKDPSRLRRKGTKRCSRQDVSVTN 183
           +FSK  VID+E        WT S LLKENLLP+ RRNKD  RL++KGTKR SRQDVS+TN
Sbjct: 116 NFSKKPVIDVECGDSGDEDWTDSWLLKENLLPDVRRNKD-HRLKKKGTKRHSRQDVSLTN 174

Query: 184 EYVESDDDDDWTQSSLLKENLLPDERRNKDPSRLRRKGH---QEMLETGRLCHKQIC 345
            Y   D      +    K+   P    + DP   +R+ +   +    + +L HK IC
Sbjct: 175 GYYLDDSASFGFRRIETKDLNCPS---SSDPVNNKRRSNSISESSRGSRKLMHKNIC 228


>ref|XP_022005351.1| E3 ubiquitin-protein ligase CHFR isoform X2 [Helianthus annuus]
          Length = 410

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   RSFSKNRVIDIEFXXXXXXXWTRSSLLKENLLPNERRNKDPS-RLRRKGTKRCSRQDVSV 177
           R+FSK  VIDIE        WT S LLKENLLP+ R+NKD S RL++KGTKRCS+QD  +
Sbjct: 82  RNFSKTPVIDIE---CGDDEWTDSWLLKENLLPDTRQNKDRSNRLKKKGTKRCSKQDDLL 138

Query: 178 TNEYVESDDDDDWTQSSLLKENLLPDERRNKDPSRLRRKGHQEM 309
            N+Y   +      +S   ++N    E   ++   + +  + E+
Sbjct: 139 KNKYCLEESPSFGLKSIEKRKNTTIGEPSRRNRRLIHKNTYNEL 182


>ref|XP_022005350.1| E3 ubiquitin-protein ligase CHFR isoform X1 [Helianthus annuus]
 gb|OTF98666.1| putative zinc finger (C3HC4-type RING finger) family protein / BRCT
           domain-containing protein [Helianthus annuus]
          Length = 443

 Score = 68.9 bits (167), Expect = 4e-11
 Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 1/104 (0%)
 Frame = +1

Query: 1   RSFSKNRVIDIEFXXXXXXXWTRSSLLKENLLPNERRNKDPS-RLRRKGTKRCSRQDVSV 177
           R+FSK  VIDIE        WT S LLKENLLP+ R+NKD S RL++KGTKRCS+QD  +
Sbjct: 115 RNFSKTPVIDIE---CGDDEWTDSWLLKENLLPDTRQNKDRSNRLKKKGTKRCSKQDDLL 171

Query: 178 TNEYVESDDDDDWTQSSLLKENLLPDERRNKDPSRLRRKGHQEM 309
            N+Y   +      +S   ++N    E   ++   + +  + E+
Sbjct: 172 KNKYCLEESPSFGLKSIEKRKNTTIGEPSRRNRRLIHKNTYNEL 215


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