BLASTX nr result

ID: Chrysanthemum21_contig00025759 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00025759
         (589 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_023742855.1| tyrosyl-DNA phosphodiesterase 2 [Lactuca sat...    57   2e-07
gb|PLY66846.1| hypothetical protein LSAT_7X16360 [Lactuca sativa]      57   2e-07
gb|KVI09377.1| hypothetical protein Ccrd_012248 [Cynara carduncu...    54   2e-06

>ref|XP_023742855.1| tyrosyl-DNA phosphodiesterase 2 [Lactuca sativa]
          Length = 455

 Score = 57.4 bits (137), Expect(2) = 2e-07
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = -3

Query: 458 YKLSCYQICGTRNSSFSXXXXXXXXXXXLGSKVVGNVFLPLLKKCSNSSTNKRKI 294
           YK+S  +ICGTRNSSFS           +GS  VGNVFLPLL++C+N+   KRKI
Sbjct: 94  YKVSSCEICGTRNSSFSSNLGLDDEEMEVGSSAVGNVFLPLLQRCNNA---KRKI 145



 Score = 25.4 bits (54), Expect(2) = 2e-07
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 277 DDVDLGASRGVKSSNK*AVDVGEM 206
           + +DL  SRG+KS++K  +D  E+
Sbjct: 155 NSIDLSVSRGLKSADKKVIDSDEI 178


>gb|PLY66846.1| hypothetical protein LSAT_7X16360 [Lactuca sativa]
          Length = 415

 Score = 57.4 bits (137), Expect(2) = 2e-07
 Identities = 30/55 (54%), Positives = 37/55 (67%)
 Frame = -3

Query: 458 YKLSCYQICGTRNSSFSXXXXXXXXXXXLGSKVVGNVFLPLLKKCSNSSTNKRKI 294
           YK+S  +ICGTRNSSFS           +GS  VGNVFLPLL++C+N+   KRKI
Sbjct: 54  YKVSSCEICGTRNSSFSSNLGLDDEEMEVGSSAVGNVFLPLLQRCNNA---KRKI 105



 Score = 25.4 bits (54), Expect(2) = 2e-07
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -1

Query: 277 DDVDLGASRGVKSSNK*AVDVGEM 206
           + +DL  SRG+KS++K  +D  E+
Sbjct: 115 NSIDLSVSRGLKSADKKVIDSDEI 138


>gb|KVI09377.1| hypothetical protein Ccrd_012248 [Cynara cardunculus var. scolymus]
          Length = 443

 Score = 53.5 bits (127), Expect(2) = 2e-06
 Identities = 32/57 (56%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = -3

Query: 458 YKLSCYQICGTRNSSFSXXXXXXXXXXXLG-SKVVGNVFLPLLKKCSNSSTNKRKIG 291
           YKLS  +ICGTRNSSFS           +G S +VGNVFLPLL++ SN    KRKIG
Sbjct: 97  YKLSSCEICGTRNSSFSSNLRLEDEELEMGSSSIVGNVFLPLLQRGSN---GKRKIG 150



 Score = 25.8 bits (55), Expect(2) = 2e-06
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -1

Query: 286 DSVDDVDLGASRGVKSSNK*AVD 218
           D  D VDLG SRG KS ++  VD
Sbjct: 159 DDDDCVDLGVSRGFKSVDRKRVD 181


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