BLASTX nr result

ID: Chrysanthemum21_contig00025407 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00025407
         (371 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI08258.1| PWWP-like protein [Cynara cardunculus var. scolymus]    97   1e-20
gb|KVI01277.1| hypothetical protein Ccrd_020481 [Cynara carduncu...    85   1e-16

>gb|KVI08258.1| PWWP-like protein [Cynara cardunculus var. scolymus]
          Length = 1533

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 58/122 (47%), Positives = 70/122 (57%)
 Frame = +1

Query: 4   TTMNPGSXXXXXXXXXXXXTSKDEAQNCVSVDPSLVCPEVINSASVAGDANVHPGNLDGN 183
           T  NPGS              KDE Q   SV+PSLVC +  N ++   D NV   NLD  
Sbjct: 529 TATNPGSEDVDVVVEEGL-ACKDETQGGASVNPSLVCDDNRNLSTGEDDVNVQAENLDQQ 587

Query: 184 GEADKLNKKESPHLTTVDITQDAEKVKNGTGVQDSKLAVESLSGEPQVVGKIDVLENEET 363
            E  KL+K +S H TT  IT DA+K + GTGV DSKLAVES +GEPQ   + DV + EET
Sbjct: 588 AEVAKLSKNQSFHPTTEVITNDAQKPEKGTGVGDSKLAVESSNGEPQFGRETDVKDREET 647

Query: 364 EK 369
           E+
Sbjct: 648 ER 649


>gb|KVI01277.1| hypothetical protein Ccrd_020481 [Cynara cardunculus var. scolymus]
          Length = 1106

 Score = 84.7 bits (208), Expect = 1e-16
 Identities = 55/129 (42%), Positives = 67/129 (51%), Gaps = 7/129 (5%)
 Frame = +1

Query: 4   TTMNPGSXXXXXXXXXXXXTSKDEAQNCVSVDPSLVCPE-------VINSASVAGDANVH 162
           TT NPGS             SKDEAQ+ VSVDPSLVC +       V+NSA+  GD    
Sbjct: 543 TTTNPGSEDVDVVVVEEGLASKDEAQDGVSVDPSLVCADNRSLPTKVVNSATSEGDVIAQ 602

Query: 163 PGNLDGNGEADKLNKKESPHLTTVDITQDAEKVKNGTGVQDSKLAVESLSGEPQVVGKID 342
             N+D   E                I+  A  ++NGTGV DSK AV+S SGEPQ  G+  
Sbjct: 603 AENVDQQAEV---------------ISHGARNLENGTGVGDSKSAVDSSSGEPQFGGETA 647

Query: 343 VLENEETEK 369
           V++ EETEK
Sbjct: 648 VIDIEETEK 656


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