BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00025206
         (789 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX87842.1| retrotransposon protein putative Ty1-copia subcla...   297   7e-95
gb|ADB85430.1| putative retrotransposon protein [Phyllostachys e...   301   1e-92
gb|KYP76577.1| Retrovirus-related Pol polyprotein from transposo...   286   1e-92
gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subc...   300   2e-91
gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-...   298   4e-91
dbj|BAA22288.1| polyprotein [Oryza australiensis]                     301   1e-90
emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]        296   2e-90
gb|AAC26250.1| contains similarity to reverse transcriptase (Pfa...   296   2e-90
gb|ADB85429.1| putative retrotransposon protein [Phyllostachys e...   295   7e-90
gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis D...   298   1e-89
gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Jap...   296   4e-89
gb|PKI72506.1| hypothetical protein CRG98_007109 [Punica granatum]    289   4e-89
ref|WP_042516817.1| hypothetical protein [Lactobacillus brevis] ...   274   6e-89
gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]     293   4e-88
gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subc...   293   8e-88
gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]     289   5e-87
gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subc...   289   8e-87
gb|OTG07182.1| putative zinc finger, CCHC-type [Helianthus annuus]    286   3e-86
dbj|GAU49783.1| hypothetical protein TSUD_369070 [Trifolium subt...   279   8e-85
gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-...   263   2e-84

>gb|PNX87842.1| retrotransposon protein putative Ty1-copia subclass, partial
           [Trifolium pratense]
          Length = 511

 Score =  297 bits (760), Expect = 7e-95
 Identities = 148/223 (66%), Positives = 175/223 (78%)
 Frame = +2

Query: 119 LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
           LYVDDIL+ G DIPSMQ+ K +L + FSMKDLGEAAYILGIKIYRDRSKRL+GLSQS YI
Sbjct: 288 LYVDDILLFGNDIPSMQSTKVWLSEQFSMKDLGEAAYILGIKIYRDRSKRLLGLSQSMYI 347

Query: 299 DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
           D ILKR+NM+ SK+GYLP+ +   L  + C  T  E  RM +VPYASAVG+IMY + CTR
Sbjct: 348 DTILKRYNMEKSKRGYLPVGMGVSLSRENCPKTLEERERMSRVPYASAVGAIMYTMTCTR 407

Query: 479 PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
           PDVA+A  +TSRYQ NPGE HW  VK ILKYLR TKD FL+YG   ++EL + GY DAS+
Sbjct: 408 PDVAYALGVTSRYQANPGEEHWKVVKTILKYLRRTKDQFLIYG---NSELSLKGYTDASF 464

Query: 659 QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
             DKDD+KS +GYVF +NGGA+ WKS KQ+T+A S TEAEYIA
Sbjct: 465 ASDKDDSKSISGYVFTLNGGAISWKSSKQATVADSTTEAEYIA 507


>gb|ADB85430.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 896

 Score =  301 bits (771), Expect = 1e-92
 Identities = 149/223 (66%), Positives = 180/223 (80%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DIP +++VK+ L K FSMKDLG+AAYILGI+IYRDRSKRLIGLSQ  YI
Sbjct: 570  LYVDDILLVGNDIPMLESVKSSLRKSFSMKDLGDAAYILGIRIYRDRSKRLIGLSQEMYI 629

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+L RFNMQNSK+G+LPM     L  + C +T  E  +M  +PYASA+GSIMYA+ CTR
Sbjct: 630  DKVLNRFNMQNSKRGFLPMAHGINLSKNQCPTTTDERDKMSDIPYASAIGSIMYAMICTR 689

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDV++A ++TSRYQ +P E HW AVK+ILKYLR TKD+FLVYGG  D EL V GY DAS+
Sbjct: 690  PDVSYALSVTSRYQADPSEGHWTAVKNILKYLRRTKDVFLVYGG--DEELVVNGYTDASF 747

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +SQ+G+VF++NGGAV WKS KQ T+A S TEAEYIA
Sbjct: 748  QTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTEAEYIA 790



 Score = 65.5 bits (158), Expect = 2e-08
 Identities = 29/40 (72%), Positives = 34/40 (85%)
 Frame = +1

Query: 1   SRQWNKRFDEEIKRYGFIQNLDEPCVYHKVSGSDVIFLIL 120
           SR WN RFDEEIKR+GFI+N +EPCVY KVSGS ++ LIL
Sbjct: 531 SRSWNIRFDEEIKRFGFIKNKEEPCVYMKVSGSTLVILIL 570


>gb|KYP76577.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 368

 Score =  286 bits (733), Expect = 1e-92
 Identities = 144/223 (64%), Positives = 173/223 (77%)
 Frame = +2

Query: 119 LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
           LYVDDIL++G DIP +Q+ K +L + FSMKDLGEAAYILGIKIYRDRSKR++GLSQS YI
Sbjct: 86  LYVDDILLIGNDIPFLQSTKIWLSEQFSMKDLGEAAYILGIKIYRDRSKRMLGLSQSMYI 145

Query: 299 DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
           D IL+R+NM+NSK+GY P+     L ++ C  T  E  RM +VPYASAVG+IMY + CTR
Sbjct: 146 DTILRRYNMENSKRGYFPIGTGVTLSNEDCPKTLEERTRMNRVPYASAVGAIMYIMTCTR 205

Query: 479 PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
           PDVAFA  + SRYQ NPGE +W  VK ILKYLR T+D FL+YGG   TEL + GY DAS+
Sbjct: 206 PDVAFAPGVVSRYQANPGEENWKVVKTILKYLRRTQDQFLIYGG---TELMLKGYTDASF 262

Query: 659 QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
             DKDD+KS +GYVF + GGAV WKS KQ+T+A S TEAEYIA
Sbjct: 263 ASDKDDSKSISGYVFTLYGGAVSWKSSKQATVADSTTEAEYIA 305


>gb|ABA97342.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1050

 Score =  300 bits (769), Expect = 2e-91
 Identities = 151/223 (67%), Positives = 176/223 (78%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DIP +++VK  L   FSMKDLGEAAYILGI+IYRDRSKRLIGLSQS YI
Sbjct: 724  LYVDDILLIGNDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYI 783

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+LKRFNMQ+SKKG+LPM     L  + C  T  E  +M  +PYASA+GSIMYA+ CT 
Sbjct: 784  DKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTH 843

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDV++A + TSRYQ +PGE HWIAVK+ILKYLR TKDMFLVYGG    EL V GY DAS+
Sbjct: 844  PDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLVYGG--QEELVVKGYTDASF 901

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +SQ+G+VF +NGGAV WKS KQ T+  S TEAEYIA
Sbjct: 902  QTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVVDSITEAEYIA 944


>gb|AAX94813.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA93176.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 938

 Score =  298 bits (762), Expect = 4e-91
 Identities = 149/223 (66%), Positives = 177/223 (79%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++  DIP +++VK  L   FSMKDLGEAAYILGI+IY+DRSKRLIGLSQS YI
Sbjct: 709  LYVDDILLIENDIPMLESVKTSLKNSFSMKDLGEAAYILGIRIYKDRSKRLIGLSQSTYI 768

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+LKRFNMQ+SKKG+LPM     L  + C  T  E  +M  +PYASA+GSIMYA+ CTR
Sbjct: 769  DKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTNERNKMSVIPYASAIGSIMYAMLCTR 828

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDV++A + TS+YQ +PGE HWIA+K+ILKYLR TKDMFLVYGG    EL V GY DAS+
Sbjct: 829  PDVSYALSATSQYQSDPGESHWIALKNILKYLRRTKDMFLVYGG--QEELVVNGYTDASF 886

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +SQ+G+VF +NGGAV WKS KQ T+A S TEAEYIA
Sbjct: 887  QIDKDDFRSQSGFVFYLNGGAVSWKSSKQDTVADSTTEAEYIA 929


>dbj|BAA22288.1| polyprotein [Oryza australiensis]
          Length = 1317

 Score =  301 bits (772), Expect = 1e-90
 Identities = 152/223 (68%), Positives = 178/223 (79%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DIP +++VK+ L   FSMKDLGEAAYILGI+IYRDRSKRLIGLSQS YI
Sbjct: 990  LYVDDILLIGNDIPMLESVKSSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYI 1049

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+LKRFNM +SKKG+LPM     L  + C  T  E  +M  VPYASA+GSIMYA+ CTR
Sbjct: 1050 DKVLKRFNMHDSKKGFLPMSHGINLSKNQCPQTHDERNKMGMVPYASAIGSIMYAMLCTR 1109

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDV++A + TSRYQ +PGE HW AVK+ILKYLR TKDMFLVYGG  D  L V+GY DAS+
Sbjct: 1110 PDVSYALSATSRYQSDPGEGHWTAVKNILKYLRRTKDMFLVYGGEED--LVVSGYTDASF 1167

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +SQ+G+VF +NGGAV WKS KQ T+A S TEAEYIA
Sbjct: 1168 QTDKDDYRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIA 1210



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 27/40 (67%), Positives = 32/40 (80%)
 Frame = +1

Query: 1    SRQWNKRFDEEIKRYGFIQNLDEPCVYHKVSGSDVIFLIL 120
            SR WN RFDE IK +GFI+N +E CVY KVSGS ++FLIL
Sbjct: 951  SRSWNIRFDEVIKGFGFIKNEEEACVYKKVSGSAIVFLIL 990


>emb|CAD39797.2| OSJNBa0071G03.10 [Oryza sativa Japonica Group]
          Length = 948

 Score =  296 bits (758), Expect = 2e-90
 Identities = 148/223 (66%), Positives = 176/223 (78%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DIP +++VK  L   FSMKDLGEAAYILGI+IYRDRSKRLIGLSQS YI
Sbjct: 712  LYVDDILLIGNDIPILESVKTLLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYI 771

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+LKRFNMQ+SKKG+LPM     L  + C  T  E  +M  +PYASA+GSIMYA+ CT 
Sbjct: 772  DKVLKRFNMQDSKKGFLPMSHDINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTC 831

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDV++A + T+RYQ +PGE HWIAVK+ILKYLR T+DMFLVYGG    EL V GY DAS+
Sbjct: 832  PDVSYALSATNRYQSDPGESHWIAVKNILKYLRRTEDMFLVYGG--QEELVVNGYTDASF 889

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +S++G+VF +NGG V WKS KQ T+A S TEAEYIA
Sbjct: 890  QTDKDDFRSRSGFVFCLNGGVVSWKSSKQDTVADSTTEAEYIA 932


>gb|AAC26250.1| contains similarity to reverse transcriptase (Pfam: rvt.hmm, score
            19.29) [Arabidopsis thaliana]
 emb|CAB80804.1| putative retrotransposon protein [Arabidopsis thaliana]
          Length = 964

 Score =  296 bits (758), Expect = 2e-90
 Identities = 147/223 (65%), Positives = 175/223 (78%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DIP +Q+VK +LG CFSMKD+GEAAYILGI+IYRDR  ++IGLSQ  YI
Sbjct: 637  LYVDDILLLGNDIPLLQSVKTWLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYI 696

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+L RFNM +SKKG++PM     L    C ST  E  RM K+PYASA+GSIMYA+  TR
Sbjct: 697  DKVLHRFNMHDSKKGFIPMSHGITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTR 756

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDVA A +MTSRYQ +PGE HWI V++I KYLR TKD FLVYGG+   EL V+GY DAS+
Sbjct: 757  PDVACALSMTSRYQSDPGESHWIVVRNIFKYLRRTKDKFLVYGGS--EELVVSGYTDASF 814

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +SQ+G+ F +NGGAV WKS KQST+A S TEAEYIA
Sbjct: 815  QTDKDDFRSQSGFFFCLNGGAVSWKSTKQSTVADSTTEAEYIA 857


>gb|ADB85429.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1313

 Score =  295 bits (755), Expect(2) = 7e-90
 Identities = 151/225 (67%), Positives = 179/225 (79%), Gaps = 2/225 (0%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DIP +++VKA L   FSMKDLGEAAYILGIKIYRDRS+RLIGLSQS YI
Sbjct: 986  LYVDDILLIGNDIPMLESVKASLKNSFSMKDLGEAAYILGIKIYRDRSRRLIGLSQSTYI 1045

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGL--CSDMCASTPAEVARMQKVPYASAVGSIMYAVRC 472
            DK+L RFNMQN+KKG+LPM   HG+        ST  E  RM  +PYASA+GSIMYA+ C
Sbjct: 1046 DKVLIRFNMQNTKKGFLPM--SHGISPSKSQRPSTTDERDRMNGIPYASAIGSIMYAMIC 1103

Query: 473  TRPDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDA 652
            TR DV++A ++TSRYQ +PGE HW AVK+ILKYLR TKD FL+YGG  D EL V GY DA
Sbjct: 1104 TRQDVSYALSVTSRYQADPGECHWTAVKNILKYLRRTKDAFLIYGG--DEELVVNGYTDA 1161

Query: 653  SWQCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            S+Q DKDD +SQ+G+VF++NGGAV WKS KQ T+A S T+AEYIA
Sbjct: 1162 SFQTDKDDYRSQSGFVFILNGGAVSWKSSKQETVADSTTKAEYIA 1206



 Score = 65.1 bits (157), Expect(2) = 7e-90
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = +1

Query: 1    SRQWNKRFDEEIKRYGFIQNLDEPCVYHKVSGSDVIFLIL 120
            SR WN RFDEEIKR+GF++N +EPCVY KVSGS ++ LIL
Sbjct: 947  SRSWNIRFDEEIKRFGFVKNKEEPCVYMKVSGSTLVILIL 986


>gb|EXX50149.1| gag-pol fusion protein [Rhizophagus irregularis DAOM 197198w]
          Length = 1303

 Score =  298 bits (764), Expect = 1e-89
 Identities = 150/223 (67%), Positives = 180/223 (80%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL+MG DIP++Q+VKA+LGKCF+MKDLGEAAYILGI+I RDR KRLIGLSQ  Y+
Sbjct: 973  LYVDDILLMGNDIPTLQDVKAWLGKCFAMKDLGEAAYILGIRILRDRKKRLIGLSQGTYL 1032

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            +K+LKRF+M+NSKKG LP++    L      ST  E+A M +VPYASAVGSIMYA+ CTR
Sbjct: 1033 EKVLKRFSMENSKKGELPIQSNAKLSKTQSPSTDEEIAEMSRVPYASAVGSIMYAMTCTR 1092

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDVAFA +M SRYQ NPG  HWIAVK+ILKYLR TK+M LV GG+ DT L V GY DAS+
Sbjct: 1093 PDVAFALSMVSRYQGNPGRAHWIAVKNILKYLRRTKNMVLVLGGS-DT-LRVEGYTDASF 1150

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q D+D  +SQ+G+VF++NGGAV WKS KQ T+A S  E+EYIA
Sbjct: 1151 QTDRDSGRSQSGWVFLLNGGAVTWKSSKQETVADSTCESEYIA 1193


>gb|AAV85747.1| Integrase core domain, putative [Oryza sativa Japonica Group]
 gb|AAX92956.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92827.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1184

 Score =  296 bits (758), Expect = 4e-89
 Identities = 149/223 (66%), Positives = 174/223 (78%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DI  +++VK  L   FSMKDLGEAAYILGI+IYRDRSKRLIGLSQS YI
Sbjct: 861  LYVDDILLIGNDISMLESVKTSLKNSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYI 920

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+LKRFNMQ+SKKG+LPM     L  + C  T  E  +M  +PYASA+GSIMYA+ CTR
Sbjct: 921  DKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTR 980

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDV++A + TSRYQ +PGE HWIAVK+ILKYLR TKDMFL YGG    EL V GY DAS+
Sbjct: 981  PDVSYALSATSRYQSDPGESHWIAVKNILKYLRRTKDMFLAYGG--QEELVVNGYTDASF 1038

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +SQ+G+VF +NGGAV WKS KQ  +  S TEAEYIA
Sbjct: 1039 QIDKDDFRSQSGFVFCLNGGAVSWKSSKQDIVVDSTTEAEYIA 1081



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +1

Query: 1   SRQWNKRFDEEIKRYGFIQNLDEPCVYHKVSGSDVIFLIL 120
           SR WN RFDE +K  GF++N +EPCVY K+SGS ++FLIL
Sbjct: 822 SRSWNIRFDEVVKALGFVRNEEEPCVYKKISGSALVFLIL 861


>gb|PKI72506.1| hypothetical protein CRG98_007109 [Punica granatum]
          Length = 783

 Score =  289 bits (740), Expect = 4e-89
 Identities = 145/223 (65%), Positives = 177/223 (79%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DI S+Q+VK +LG+CFSMKDLGEA Y+LGIKIYRDRS RL+GLSQSAYI
Sbjct: 467  LYVDDILLIGNDILSLQSVKTWLGRCFSMKDLGEATYVLGIKIYRDRSNRLLGLSQSAYI 526

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+L RF+MQ+SKKG LPM     L      ST  E  R+ ++PYASA+GSIMYA+ CTR
Sbjct: 527  DKVLWRFSMQDSKKGSLPMLHGISLSKAQSPSTREERDRINRIPYASAIGSIMYAMLCTR 586

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
             +V++  +MTSRYQ +PGE HWIAVK+ILKYLR TK++FLVYGG  + EL V GY D S+
Sbjct: 587  SNVSYTLSMTSRYQSDPGERHWIAVKNILKYLRRTKEIFLVYGG--EEELVVRGYTDVSF 644

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q +KDD++SQ+GYV  +NGGAV WKS KQ T+A S  EAEYIA
Sbjct: 645  QTNKDDSRSQSGYVLCLNGGAVSWKSSKQETVADSTIEAEYIA 687



 Score = 64.7 bits (156), Expect = 4e-08
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +1

Query: 1   SRQWNKRFDEEIKRYGFIQNLDEPCVYHKVSGSDVIFLIL 120
           SR WN RFD+ IK +GFI+N DEPCVY KVSGS VIFL+L
Sbjct: 428 SRSWNLRFDDAIKEFGFIKNEDEPCVYKKVSGSVVIFLVL 467


>ref|WP_042516817.1| hypothetical protein [Lactobacillus brevis]
 gb|KIO93795.1| hypothetical protein QP38_2416 [Lactobacillus brevis]
          Length = 283

 Score =  274 bits (701), Expect = 6e-89
 Identities = 137/223 (61%), Positives = 167/223 (74%)
 Frame = +2

Query: 119 LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
           LYVDDIL++G ++  ++++K YL K FSMKDLGEAAYILGIKIYRDRSKR+IGLSQS Y+
Sbjct: 54  LYVDDILLIGNNVEFLESIKDYLNKSFSMKDLGEAAYILGIKIYRDRSKRVIGLSQSTYL 113

Query: 299 DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
           D +LKRF M+ SKKG+LP+     L    C +T  +   M+ VPYASA+GSIMYA+ CTR
Sbjct: 114 DNVLKRFKMEQSKKGFLPVLQGTKLSKTQCPATDEDREHMRSVPYASAIGSIMYAMMCTR 173

Query: 479 PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
           PDV+ A +M  R Q NP   HW AVK+ILKYL+ TK+MFLVYGG  D EL V GY DAS+
Sbjct: 174 PDVSLAISMAGRSQSNPAVHHWTAVKNILKYLKRTKEMFLVYGG--DEELAVKGYVDASF 231

Query: 659 QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
             D DD+KSQT YVF++N GAV W S KQS +A S  EAEY+A
Sbjct: 232 DTDPDDSKSQTRYVFILNEGAVSWCSSKQSVVADSTCEAEYMA 274



 Score = 62.4 bits (150), Expect = 1e-07
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = +1

Query: 1   SRQWNKRFDEEIKRYGFIQNLDEPCVYHKVSGSDVIFLIL 120
           SR WNKRFDE IK +GFIQ + E C+Y KVSGS V+FLIL
Sbjct: 15  SRSWNKRFDEVIKAFGFIQVVGESCIYKKVSGSSVVFLIL 54


>gb|AAP44605.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1161

 Score =  293 bits (750), Expect = 4e-88
 Identities = 150/223 (67%), Positives = 175/223 (78%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DIP +++VK  L   FSMKDLGEAAYILGI+IYRDRSKRLIGLSQS YI
Sbjct: 852  LYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYI 911

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+LKRFNMQ+SKKG+LPM     L  + C  T  E  +M  +PYASA+GSIMYA+ CTR
Sbjct: 912  DKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTR 971

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
             DV++A + TSRYQ + GE HWIAVK+ILKYLR TKDMFLVYG     EL V GY DAS+
Sbjct: 972  LDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYG--RQEELVVNGYTDASF 1029

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +SQ+G+VF +NGGAV WKS KQ T+A S TEAEYIA
Sbjct: 1030 QTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIA 1072



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +1

Query: 1   SRQWNKRFDEEIKRYGFIQNLDEPCVYHKVSGSDVIFLIL 120
           SR WN RFDE +K  GF++N +EPCVY K+SGS ++FLIL
Sbjct: 813 SRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLIL 852


>gb|ABF97047.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1248

 Score =  293 bits (750), Expect = 8e-88
 Identities = 150/223 (67%), Positives = 175/223 (78%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DIP +++VK  L   FSMKDLGEAAYILGI+IYRDRSKRLIGLSQS YI
Sbjct: 939  LYVDDILLIGNDIPMLESVKTSLKYSFSMKDLGEAAYILGIRIYRDRSKRLIGLSQSTYI 998

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+LKRFNMQ+SKKG+LPM     L  + C  T  E  +M  +PYASA+GSIMYA+ CTR
Sbjct: 999  DKVLKRFNMQDSKKGFLPMSHGINLGKNQCPQTTDERNKMSVIPYASAIGSIMYAMLCTR 1058

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
             DV++A + TSRYQ + GE HWIAVK+ILKYLR TKDMFLVYG     EL V GY DAS+
Sbjct: 1059 LDVSYALSATSRYQSDLGESHWIAVKNILKYLRRTKDMFLVYG--RQEELVVNGYTDASF 1116

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +SQ+G+VF +NGGAV WKS KQ T+A S TEAEYIA
Sbjct: 1117 QTDKDDFRSQSGFVFCLNGGAVSWKSSKQDTVADSTTEAEYIA 1159



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +1

Query: 1    SRQWNKRFDEEIKRYGFIQNLDEPCVYHKVSGSDVIFLIL 120
            SR WN RFDE +K  GF++N +EPCVY K+SGS ++FLIL
Sbjct: 900  SRSWNIRFDEVVKALGFVKNEEEPCVYKKISGSALVFLIL 939


>gb|AAS01945.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1084

 Score =  289 bits (740), Expect = 5e-87
 Identities = 146/223 (65%), Positives = 171/223 (76%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DIP +++V   L   FSMKDLGEAAYILGI+IYRD SKRLIGLS+S YI
Sbjct: 855  LYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIGLSESTYI 914

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+LK FNMQ+SKKG+LPM     L  + C  T  E  +M  +PYASA+GSIMYA+ CTR
Sbjct: 915  DKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAIGSIMYAMLCTR 974

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDV++  + TSRYQ +P E HWIAVK+ILKYLR TKDMFLVYGG    EL V GY DAS+
Sbjct: 975  PDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGG--QEELVVNGYTDASF 1032

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +SQ+G+VF +NG AV WKS KQ T A S TEAEYIA
Sbjct: 1033 QTDKDDFRSQSGFVFCLNGSAVSWKSSKQDTAANSTTEAEYIA 1075


>gb|ABF97213.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1142

 Score =  289 bits (740), Expect = 8e-87
 Identities = 146/223 (65%), Positives = 171/223 (76%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDIL++G DIP +++V   L   FSMKDLGEAAYILGI+IYRD SKRLIGLS+S YI
Sbjct: 913  LYVDDILLIGNDIPMLESVNISLKNSFSMKDLGEAAYILGIRIYRDGSKRLIGLSESTYI 972

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            DK+LK FNMQ+SKKG+LPM     L  + C  T  E  +M  +PYASA+GSIMYA+ CTR
Sbjct: 973  DKVLKMFNMQDSKKGFLPMSHGINLNKNQCLQTTNEQNKMSVIPYASAIGSIMYAMLCTR 1032

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDV++  + TSRYQ +P E HWIAVK+ILKYLR TKDMFLVYGG    EL V GY DAS+
Sbjct: 1033 PDVSYVLSATSRYQSDPSESHWIAVKNILKYLRRTKDMFLVYGG--QEELVVNGYTDASF 1090

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q DKDD +SQ+G+VF +NG AV WKS KQ T A S TEAEYIA
Sbjct: 1091 QTDKDDFRSQSGFVFCLNGSAVSWKSSKQDTAANSTTEAEYIA 1133


>gb|OTG07182.1| putative zinc finger, CCHC-type [Helianthus annuus]
          Length = 1325

 Score =  286 bits (732), Expect(2) = 3e-86
 Identities = 140/223 (62%), Positives = 177/223 (79%)
 Frame = +2

Query: 119  LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
            LYVDDILI+G +IP ++ +K +LG CF+M+DLGEAAYILGIKIYR+RSKRL+GL+QS YI
Sbjct: 995  LYVDDILIIGNNIPMLKEIKHWLGSCFAMQDLGEAAYILGIKIYRNRSKRLLGLTQSTYI 1054

Query: 299  DKILKRFNMQNSKKGYLPMEVKHGLCSDMCASTPAEVARMQKVPYASAVGSIMYAVRCTR 478
            D++++RF M+NSKKG +PM     L      S   E+ +M+ VPYASA+G IMYA+ CTR
Sbjct: 1055 DQVMRRFKMENSKKGGVPMTKGTVLDKSQAPSEDREIKQMEGVPYASAIGFIMYAMVCTR 1114

Query: 479  PDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDASW 658
            PDV++A +MTSRYQQNPG  HW AVK+ILKYLR TKDMFL++GG  + EL V  Y DAS+
Sbjct: 1115 PDVSYALSMTSRYQQNPGVAHWTAVKNILKYLRRTKDMFLIFGG-VNEELTVKCYTDASF 1173

Query: 659  QCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIAMSATEAEYIA 787
            Q D+D ++SQTG+VF +NGGAV WKS KQS +A S TE+EYIA
Sbjct: 1174 QTDRDTSRSQTGFVFTLNGGAVSWKSSKQSVVADSTTESEYIA 1216



 Score = 61.6 bits (148), Expect(2) = 3e-86
 Identities = 25/40 (62%), Positives = 32/40 (80%)
 Frame = +1

Query: 1    SRQWNKRFDEEIKRYGFIQNLDEPCVYHKVSGSDVIFLIL 120
            SR WN RFD+++K +GF++N DEPCVY K SGS + FLIL
Sbjct: 956  SRSWNLRFDQKVKEFGFVKNEDEPCVYRKASGSAISFLIL 995


>dbj|GAU49783.1| hypothetical protein TSUD_369070 [Trifolium subterraneum]
          Length = 1744

 Score =  279 bits (714), Expect(2) = 8e-85
 Identities = 139/215 (64%), Positives = 168/215 (78%), Gaps = 2/215 (0%)
 Frame = +2

Query: 119 LYVDDILIMGKDIPSMQNVKAYLGKCFSMKDLGEAAYILGIKIYRDRSKRLIGLSQSAYI 298
           LYVDD+L+MG +IP++Q VK  LGKCFSMKDLGEAAYI GI+IYRDRS++L+GLSQS YI
Sbjct: 347 LYVDDMLLMGNNIPTLQQVKTRLGKCFSMKDLGEAAYIQGIRIYRDRSQKLLGLSQSKYI 406

Query: 299 DKILKRFNMQNSKKGYLPMEVKHGLCSDMCAS--TPAEVARMQKVPYASAVGSIMYAVRC 472
           DK+L+RF+M  SKKG++PM+  HGLC     S  T  E  RM K+PYASA+G IMYA+ C
Sbjct: 407 DKVLRRFSMHESKKGFIPMQ--HGLCLSKTQSPLTKEERDRMNKIPYASAIGFIMYAMLC 464

Query: 473 TRPDVAFAQNMTSRYQQNPGELHWIAVKHILKYLRNTKDMFLVYGGNPDTELGVTGYCDA 652
           TRPDV++A + TSRYQ NPG+ HW+AVK+ILKYLR TK+ FL+YGG     L V GY  A
Sbjct: 465 TRPDVSYALSATSRYQSNPGDPHWVAVKNILKYLRRTKNSFLIYGGQEG--LAVIGYTYA 522

Query: 653 SWQCDKDDTKSQTGYVFVINGGAVDWKSKKQSTIA 757
           S+Q DKDD KSQ GYVF +NGG V WKS KQ T+A
Sbjct: 523 SFQTDKDDFKSQYGYVFCLNGGDVSWKSSKQETVA 557



 Score = 63.9 bits (154), Expect(2) = 8e-85
 Identities = 27/40 (67%), Positives = 34/40 (85%)
 Frame = +1

Query: 1   SRQWNKRFDEEIKRYGFIQNLDEPCVYHKVSGSDVIFLIL 120
           SR WN RFDE +K++GFI+N DEPCV+ KVSGS V+FL+L
Sbjct: 308 SRSWNLRFDETVKQFGFIKNEDEPCVFKKVSGSIVVFLVL 347


>gb|AAX96622.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group]
 gb|ABA92972.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 305

 Score =  263 bits (673), Expect = 2e-84
 Identities = 132/195 (67%), Positives = 154/195 (78%)
 Frame = +2

Query: 203 MKDLGEAAYILGIKIYRDRSKRLIGLSQSAYIDKILKRFNMQNSKKGYLPMEVKHGLCSD 382
           MKDLGEAAYILGI+IYRDRSKRLIGL QS YIDK+LKRFNMQ+SKKG+LPM     L  +
Sbjct: 1   MKDLGEAAYILGIRIYRDRSKRLIGLRQSTYIDKVLKRFNMQDSKKGFLPMSHDINLGKN 60

Query: 383 MCASTPAEVARMQKVPYASAVGSIMYAVRCTRPDVAFAQNMTSRYQQNPGELHWIAVKHI 562
            C+ T  E  +M  +PYASA+GSIMYA+ CTRPDV++A + TSRYQ +PGE HWIAVK+I
Sbjct: 61  QCSQTTDERNKMSVIPYASAIGSIMYAMLCTRPDVSYALSATSRYQSDPGETHWIAVKNI 120

Query: 563 LKYLRNTKDMFLVYGGNPDTELGVTGYCDASWQCDKDDTKSQTGYVFVINGGAVDWKSKK 742
           LKYL  TKDMFLVYGG    EL V  Y DAS+Q DKDD +SQ+G+VF +NGGAV WKS K
Sbjct: 121 LKYLIRTKDMFLVYGG--QEELVVNDYTDASFQTDKDDFRSQSGFVFCLNGGAVSWKSSK 178

Query: 743 QSTIAMSATEAEYIA 787
           Q T+A S T+ EYIA
Sbjct: 179 QDTLANSTTKTEYIA 193