BLASTX nr result

ID: Chrysanthemum21_contig00025115 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00025115
         (747 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10489.1| AP2/ERF domain-containing protein [Cynara cardunc...    66   3e-09
ref|XP_023772883.1| ethylene-responsive transcription factor 4-l...    65   8e-09
ref|XP_023771297.1| ethylene-responsive transcription factor 4 [...    59   7e-07

>gb|KVI10489.1| AP2/ERF domain-containing protein [Cynara cardunculus var.
           scolymus]
          Length = 241

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 59/176 (33%), Positives = 70/176 (39%), Gaps = 41/176 (23%)
 Frame = -1

Query: 747 REFRGDKARTNFP---------------AGMKNFVNNKXXXXXXXXXXXSNTXXXXXXXX 613
           REFRGDKA+TNFP               AG K  V              ++         
Sbjct: 66  REFRGDKAKTNFPTSTELSLPTAAAGGGAGGKKVVTKSPSGESSTVESSNSAVPIAAAAA 125

Query: 612 XXXXXXXS----------HFPVGFPVAHSLFLYQSQMXXXXXXSK--------MLRFNGS 487
                             HFPVGFP+AHSLFLY SQ+      +         M R +GS
Sbjct: 126 VAAAAAPLPPSALDLSLSHFPVGFPMAHSLFLYHSQINNNNNNNNGKHSNRLDMFRLDGS 185

Query: 486 VNRKPNVTI---XXXXXXXXXXXXXXVNISY--DR---KKTIAFDIDLNLPPPEVS 343
           V R P +TI                 VN SY  DR   +KT A D+DLN PPPEV+
Sbjct: 186 VVRAPRLTIGAAVVNGAQSDSDSSSVVNFSYPSDRPQPEKTFALDLDLNFPPPEVA 241


>ref|XP_023772883.1| ethylene-responsive transcription factor 4-like [Lactuca sativa]
 gb|PLY78476.1| hypothetical protein LSAT_7X104600 [Lactuca sativa]
          Length = 223

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 57/158 (36%), Positives = 68/158 (43%), Gaps = 23/158 (14%)
 Frame = -1

Query: 747 REFRGDKARTNFPAGMKNF-----VNNKXXXXXXXXXXXSNTXXXXXXXXXXXXXXXS-- 589
           REFRGDKA+TNFP   +       V  K           S+T                  
Sbjct: 66  REFRGDKAKTNFPTSTELSLPMVAVGGKPKAVTKSPSGESSTVESGSSAVPIAAAPLPPS 125

Query: 588 -------HFPVGFPVAHSLFLYQSQMXXXXXXSK---MLRFNGSVNRKPNVTI-XXXXXX 442
                  HFPVGFP+AHSLFLY SQ+      +    M R +GSV   PN+TI       
Sbjct: 126 ALDLTLSHFPVGFPMAHSLFLYHSQINNTVKHNNRLDMFRLDGSVLPAPNLTIAAGNNAQ 185

Query: 441 XXXXXXXXVNISY--DR---KKTIAFDIDLNLPPPEVS 343
                   VN S+  DR   +KT A D DLN PP EV+
Sbjct: 186 SDSDSSSVVNFSHPTDRPQPEKTFALDFDLNFPPSEVA 223


>ref|XP_023771297.1| ethylene-responsive transcription factor 4 [Lactuca sativa]
 gb|PLY79683.1| hypothetical protein LSAT_5X128280 [Lactuca sativa]
          Length = 227

 Score = 59.3 bits (142), Expect = 7e-07
 Identities = 43/160 (26%), Positives = 65/160 (40%), Gaps = 25/160 (15%)
 Frame = -1

Query: 747 REFRGDKARTNFP--------------AGMKNFV-----NNKXXXXXXXXXXXSNTXXXX 625
           R+FRG KA+TNFP               GMK        ++                   
Sbjct: 68  RQFRGAKAKTNFPFPTDLLLPTAVVSGGGMKFLTKTPTESSMVEASSNSMAPSPGPISTA 127

Query: 624 XXXXXXXXXXXSHFPVGFPVAHSLFLYQSQM------XXXXXXSKMLRFNGSVNRKPNVT 463
                      SH+P+GFP+ HS+FLY SQM              + R + SV R P++T
Sbjct: 128 LLPPEALDLSLSHYPLGFPMPHSMFLYHSQMNLHINNNNNHNRLNVFRSDRSVVRDPHLT 187

Query: 462 IXXXXXXXXXXXXXXVNISYDRKKTIAFDIDLNLPPPEVS 343
           +                +++ ++K++  D+DLN PPPEV+
Sbjct: 188 VGTGGLAQQSDSDSSPVVNFKQEKSLTLDLDLNFPPPEVA 227


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