BLASTX nr result

ID: Chrysanthemum21_contig00024646 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00024646
         (420 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI10785.1| Zinc finger, RING/FYVE/PHD-type [Cynara carduncul...    78   7e-14
ref|XP_022039839.1| E3 ubiquitin-protein ligase MBR2-like [Helia...    76   3e-13
ref|XP_023752008.1| E3 ubiquitin-protein ligase MBR2-like [Lactu...    73   4e-12
ref|XP_023729894.1| E3 ubiquitin-protein ligase MBR2-like [Lactu...    58   4e-07

>gb|KVI10785.1| Zinc finger, RING/FYVE/PHD-type [Cynara cardunculus var. scolymus]
          Length = 702

 Score = 77.8 bits (190), Expect = 7e-14
 Identities = 40/56 (71%), Positives = 46/56 (82%), Gaps = 2/56 (3%)
 Frame = -1

Query: 213 MQRRRSAFAPLPETTVDLNQGSSSNS--MDESDDWKILPPMERRLLNNDLSNELNF 52
           MQ +RS F P PE  VDLNQGS+SNS  MDE+DDW +L PMERRLLNND+S+ELNF
Sbjct: 1   MQGQRSIFDPFPEV-VDLNQGSNSNSTSMDEADDWNMLSPMERRLLNNDISSELNF 55


>ref|XP_022039839.1| E3 ubiquitin-protein ligase MBR2-like [Helianthus annuus]
 gb|OTG26840.1| putative RING/U-box superfamily protein [Helianthus annuus]
          Length = 607

 Score = 75.9 bits (185), Expect = 3e-13
 Identities = 42/57 (73%), Positives = 46/57 (80%), Gaps = 3/57 (5%)
 Frame = -1

Query: 213 MQRRRSAFAPLPETTVDLNQGSSSN--SMDESDDWK-ILPPMERRLLNNDLSNELNF 52
           MQ +RS F P PET VDLNQGS+ N  SMDE+DDW  +L PMERRLLNNDLSNELNF
Sbjct: 1   MQGQRSIFDPFPET-VDLNQGSNPNTTSMDETDDWNNMLSPMERRLLNNDLSNELNF 56


>ref|XP_023752008.1| E3 ubiquitin-protein ligase MBR2-like [Lactuca sativa]
 gb|PLY99365.1| hypothetical protein LSAT_0X4280 [Lactuca sativa]
          Length = 570

 Score = 72.8 bits (177), Expect = 4e-12
 Identities = 40/60 (66%), Positives = 47/60 (78%), Gaps = 4/60 (6%)
 Frame = -1

Query: 213 MQRRRSAFAPLPETTVDLNQGSSSN---SMDESDDWK-ILPPMERRLLNNDLSNELNFGY 46
           MQ +RS F P PE  VDLNQGS+S+   SMDESDDW  +L P+ERRLLNNDLS++LNF Y
Sbjct: 1   MQGQRSIFDPFPEA-VDLNQGSNSSNNASMDESDDWNNMLSPIERRLLNNDLSSDLNFSY 59


>ref|XP_023729894.1| E3 ubiquitin-protein ligase MBR2-like [Lactuca sativa]
 gb|PLY97560.1| hypothetical protein LSAT_5X112240 [Lactuca sativa]
          Length = 566

 Score = 58.2 bits (139), Expect = 4e-07
 Identities = 35/55 (63%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = -1

Query: 213 MQRRRSAFAPLPETTVDLNQGSSSNSMDESDDWKI-LPPMERRLLNNDLSNELNF 52
           MQR+RS F   PET VDLNQG + + M+ESD+  I L P ERRLL+NDLS ELNF
Sbjct: 1   MQRQRSIFDTFPET-VDLNQGPN-HGMNESDEHNIRLSPTERRLLSNDLSGELNF 53


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