BLASTX nr result

ID: Chrysanthemum21_contig00024613 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00024613
         (377 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KVI05704.1| hypothetical protein Ccrd_015954, partial [Cynara...    64   3e-09

>gb|KVI05704.1| hypothetical protein Ccrd_015954, partial [Cynara cardunculus var.
            scolymus]
          Length = 1184

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 16/108 (14%)
 Frame = -3

Query: 276  VTKPKKNKK--SSVTGPEYPTNV-NDPNIPNTDQFETPKKKRKIDAPRISKSAHANKAHG 106
            VTK + +K   SS    E  TNV  DPNI + DQ +TPKK R ID P+ +KSAHANK   
Sbjct: 975  VTKNEHSKLLLSSKKTSEVSTNVVKDPNITHIDQIKTPKKTRMIDTPKTNKSAHANKGQD 1034

Query: 105  EPSAEN-------------QKSSKPRVVLGLACVRAMQKSCAPEINKS 1
             PS+E+             QK +K + V G   V+ ++KS  P +N S
Sbjct: 1035 GPSSESSSSSATFGRSFRYQKLNKQQSVQGQPHVKTLKKS-VPVVNNS 1081


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