BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00024381
         (461 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004659200.1| replication-associated polyprotein [Blackber...   152   6e-40
ref|YP_009362668.1| RdRP [Alfalfa virus S] >gi|1190234726|gb|ARQ...   144   6e-37
ref|YP_009328892.1| RdRp [Arachis pintoi virus] >gi|1109489164|g...   141   7e-36
gb|APG31855.1| RdRp [Arachis pintoi virus]                            139   3e-35
gb|AHA90833.1| replicase [Garlic virus D]                             136   4e-34
ref|NP_569126.1| replicase [Garlic virus A] >gi|2826150|dbj|BAA6...   132   6e-33
ref|NP_659010.1| hypothetical protein GvEgp1 [Garlic virus E] >g...   132   9e-33
gb|AHB33487.1| replicase [Garlic virus A]                             132   9e-33
gb|AGC09141.1| Replicase [Garlic virus A]                             131   2e-32
gb|AGC67029.1| replicase [Shallot virus X]                            131   2e-32
gb|AVK94126.1| replicase [Garlic virus D] >gi|1356588320|gb|AVK9...   130   3e-32
gb|ALK24278.1| replicase [Garlic virus D]                             129   1e-31
ref|YP_008855206.1| replicase [Garlic virus D] >gi|558868945|gb|...   129   1e-31
ref|NP_620648.1| replicase [Shallot virus X] >gi|548840|sp|Q0457...   129   1e-31
ref|YP_009389473.1| RNA-dependent RNA polymerase [Vanilla latent...   127   5e-31
gb|AGG13306.1| Replicase [Garlic virus X]                             127   7e-31
gb|AGG13276.1| Replicase [Garlic virus A]                             125   2e-30
gb|AFV61767.1| replicase [Garlic virus X]                             124   4e-30
ref|NP_569132.1| replicase [Garlic virus C] >gi|2826157|dbj|BAA6...   124   4e-30
gb|AGG13300.1| Replicase [Garlic virus C]                             124   4e-30

>ref|YP_004659200.1| replication-associated polyprotein [Blackberry virus E]
 gb|AEI17897.1| replication-associated polyprotein [Blackberry virus E]
          Length = 1499

 Score =  152 bits (385), Expect = 6e-40
 Identities = 84/144 (58%), Positives = 99/144 (68%), Gaps = 2/144 (1%)
 Frame = +1

Query: 34   ARRPTPDTSHVATAYPHLTPHQ-VEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVA 210
            A R  PD    A A  H  P + V+IL  HGFTNL QQFS  GAI+P+  N  A+N  +A
Sbjct: 604  APRAGPDPK--ANAEAHTLPKRTVDILRLHGFTNLNQQFSDVGAIQPVIYNTNAANLKLA 661

Query: 211  PPT-SRSQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWV 387
            PP  S+  + + +MA  + R+ YSY +DNKRA AYMSDVKNNLTGLVLPKL R  LSAWV
Sbjct: 662  PPPLSKLNKVLDTMAQKLQRRFYSYVLDNKRATAYMSDVKNNLTGLVLPKLDRNILSAWV 721

Query: 388  ALCEHSTREVKLLVIHGAGGAGKS 459
            +L E S R V +LVIHGAGGAGKS
Sbjct: 722  SLAECSKRTVSVLVIHGAGGAGKS 745


>ref|YP_009362668.1| RdRP [Alfalfa virus S]
 gb|ARQ03275.1| RdRP [Alfalfa virus S]
          Length = 1657

 Score =  144 bits (363), Expect = 6e-37
 Identities = 75/157 (47%), Positives = 97/157 (61%), Gaps = 9/157 (5%)
 Frame = +1

Query: 16   PRTCETARRPTPDTSHV--------ATAYPHLTPHQVEILVKHGFTNLKQQFSGTGAIEP 171
            P T   A    PD +          + ++P      +EIL  HGF NL+ Q  GTG I+P
Sbjct: 756  PATLNVAETKQPDDTQAEERAATPKSNSFPPFPRATIEILQIHGFKNLRPQSDGTGPIQP 815

Query: 172  IFENPRASNFSVAPPTSRSQRT-VTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLV 348
            +  NP       + P+  +    +  +A  + R+VY Y +DNKRA +YMSDVKNNLTGLV
Sbjct: 816  VHWNPNTQKLVASEPSEEAPHCYIYKLAERLKRKVYRYHVDNKRATSYMSDVKNNLTGLV 875

Query: 349  LPKLSRETLSAWVALCEHSTREVKLLVIHGAGGAGKS 459
            LPKL R TLSAWV+LCE+S+R+V +LVIHGAGGAGKS
Sbjct: 876  LPKLDRATLSAWVSLCENSSRDVDVLVIHGAGGAGKS 912


>ref|YP_009328892.1| RdRp [Arachis pintoi virus]
 gb|APG31850.1| RdRp [Arachis pintoi virus]
          Length = 1392

 Score =  141 bits (355), Expect = 7e-36
 Identities = 72/131 (54%), Positives = 90/131 (68%)
 Frame = +1

Query: 67  ATAYPHLTPHQVEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVAPPTSRSQRTVTS 246
           +T+   L    VEIL  HGFT LK Q+ G   I+P++ NP      ++P    S   V  
Sbjct: 518 STSGASLDTPTVEILKLHGFTALKPQWDGESWIQPVYFNPTNGKLPISP-LQDSSHEVAK 576

Query: 247 MASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEHSTREVKLL 426
           +A SI R +Y Y +DNKRAA+YMSDVKNNLTGLVLPKL R+ LSAWV+LCE++ R + +L
Sbjct: 577 LAHSIRRNLYQYTVDNKRAASYMSDVKNNLTGLVLPKLDRDKLSAWVSLCENAERHISIL 636

Query: 427 VIHGAGGAGKS 459
           VIHGAGGAGKS
Sbjct: 637 VIHGAGGAGKS 647


>gb|APG31855.1| RdRp [Arachis pintoi virus]
          Length = 1392

 Score =  139 bits (350), Expect = 3e-35
 Identities = 71/120 (59%), Positives = 85/120 (70%)
 Frame = +1

Query: 100 VEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVAPPTSRSQRTVTSMASSIYRQVYS 279
           VEIL  HGFT L  Q+ G   I+P++ NP      V+P    S   V  +A SI R +Y 
Sbjct: 529 VEILKLHGFTALTPQWDGESWIQPVYFNPSNGKLPVSP-LQDSNHDVAKLAHSIKRNLYQ 587

Query: 280 YPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEHSTREVKLLVIHGAGGAGKS 459
           Y +DNKRAA+YMSDVKNNLTGLVLPKL R+ LSAWV+LCE++ R V +LVIHGAGGAGKS
Sbjct: 588 YAVDNKRAASYMSDVKNNLTGLVLPKLDRDKLSAWVSLCENAERHVSILVIHGAGGAGKS 647


>gb|AHA90833.1| replicase [Garlic virus D]
          Length = 1561

 Score =  136 bits (342), Expect = 4e-34
 Identities = 73/142 (51%), Positives = 88/142 (61%), Gaps = 1/142 (0%)
 Frame = +1

Query: 37   RRPTPDTSHVATAYPHLTPHQVEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVAPP 216
            R   PD          L    VE+L  HGFTN + Q+ G   I+PIF NP     +    
Sbjct: 630  RGEKPDKPAAKVKLHPLDDDTVELLKIHGFTNYRAQYDGEDQIQPIFRNPNTRTLTQFTT 689

Query: 217  TS-RSQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVAL 393
            T+   QR    MA  + RQ Y Y I+ KRA A+MSDVKNNLTGLVLPKL R+ LS+WV+L
Sbjct: 690  TAPEPQRCFIEMAHGLKRQCYEYRINAKRATAFMSDVKNNLTGLVLPKLERDLLSSWVSL 749

Query: 394  CEHSTREVKLLVIHGAGGAGKS 459
             EH+TR+V L+VIHGAGGAGKS
Sbjct: 750  AEHATRKVGLIVIHGAGGAGKS 771


>ref|NP_569126.1| replicase [Garlic virus A]
 dbj|BAA61806.1| replicase [Garlic virus A]
          Length = 1625

 Score =  132 bits (333), Expect = 6e-33
 Identities = 71/139 (51%), Positives = 93/139 (66%), Gaps = 5/139 (3%)
 Frame = +1

Query: 58   SHVATAYPHLTPHQ---VEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSV--APPTS 222
            +HV    P L P     ++IL  HGFT L+ Q  GT  I+P++ N +        A    
Sbjct: 701  NHVRPTRPRLEPLDQATIDILKLHGFTALQPQHDGTDQIQPVYFNDKVKYHRQLEAKDLC 760

Query: 223  RSQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEH 402
             + +   ++A+S++R +Y+Y I+NKRA AYMSDVKNNLTGLVLPKL R+ LS+WVAL E 
Sbjct: 761  ATAKPFITLATSLHRGIYNYRINNKRATAYMSDVKNNLTGLVLPKLDRDLLSSWVALAER 820

Query: 403  STREVKLLVIHGAGGAGKS 459
            +TR+V LLVIHGAGGAGKS
Sbjct: 821  TTRDVGLLVIHGAGGAGKS 839


>ref|NP_659010.1| hypothetical protein GvEgp1 [Garlic virus E]
 emb|CAC83705.1| hypothetical protein [Garlic virus E]
          Length = 1557

 Score =  132 bits (332), Expect = 9e-33
 Identities = 71/145 (48%), Positives = 87/145 (60%), Gaps = 1/145 (0%)
 Frame = +1

Query: 28   ETARRPTPDTSHVATAYPHLTPHQVEILVKHGFTNLKQQFSGTGAIEPIFENPRASNF-S 204
            E   R  P           L    VE+L  HGFTN + Q+ G   I+PI+ NP A     
Sbjct: 623  EPEERGQPSKQTCKVELTPLDADTVELLKLHGFTNYRAQYDGESQIQPIYRNPHAHFLRQ 682

Query: 205  VAPPTSRSQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAW 384
                T+  Q+    MA  + R+ Y Y +D KRA A+MSDVKNNLTGLVLPKL R+ LS+W
Sbjct: 683  YDAQTTTHQQQFVDMAHGLKRRCYGYKVDAKRATAFMSDVKNNLTGLVLPKLDRDLLSSW 742

Query: 385  VALCEHSTREVKLLVIHGAGGAGKS 459
            VAL E++TR V L+VIHGAGGAGKS
Sbjct: 743  VALAENATRTVGLIVIHGAGGAGKS 767


>gb|AHB33487.1| replicase [Garlic virus A]
          Length = 1612

 Score =  132 bits (332), Expect = 9e-33
 Identities = 74/144 (51%), Positives = 94/144 (65%), Gaps = 6/144 (4%)
 Frame = +1

Query: 46   TPDTSHVATAYPHLTPHQ---VEILVKHGFTNLKQQFSGTGAIEPIFENPRAS---NFSV 207
            T +  H   A P L P     ++IL  HGFT L+ Q  GT  I+P++ N +         
Sbjct: 684  TEENDHKQAARPKLEPLDQATIDILKLHGFTALQPQHDGTDQIQPVYFNEKIKCHRRLET 743

Query: 208  APPTSRSQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWV 387
                S +   +T +A+S++R VY+Y I+NKRA AYMSDVKNNLTGLVLPKL R+ LS+WV
Sbjct: 744  KDLCSTASPFIT-LAASLHRGVYNYRINNKRATAYMSDVKNNLTGLVLPKLDRDLLSSWV 802

Query: 388  ALCEHSTREVKLLVIHGAGGAGKS 459
            AL E +TR+V LLVIHGAGGAGKS
Sbjct: 803  ALAERTTRDVGLLVIHGAGGAGKS 826


>gb|AGC09141.1| Replicase [Garlic virus A]
          Length = 1604

 Score =  131 bits (330), Expect = 2e-32
 Identities = 72/134 (53%), Positives = 90/134 (67%), Gaps = 5/134 (3%)
 Frame = +1

Query: 73   AYPHLTPHQ---VEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSV--APPTSRSQRT 237
            A P L P     V+IL  HGFT L+ Q  G   I+P++ N +        A     + + 
Sbjct: 685  ARPRLEPLDHATVDILKLHGFTALQPQHDGADQIQPVYFNDKVKRHRQLEAKDLCATAKP 744

Query: 238  VTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEHSTREV 417
              ++A+S++R VY+Y I+NKRA AYMSDVKNNLTGLVLPKL R+ LS+WVAL E +TREV
Sbjct: 745  FVTLAASLHRGVYNYKINNKRATAYMSDVKNNLTGLVLPKLDRDLLSSWVALAERTTREV 804

Query: 418  KLLVIHGAGGAGKS 459
             LLVIHGAGGAGKS
Sbjct: 805  GLLVIHGAGGAGKS 818


>gb|AGC67029.1| replicase [Shallot virus X]
          Length = 1719

 Score =  131 bits (329), Expect = 2e-32
 Identities = 74/150 (49%), Positives = 97/150 (64%), Gaps = 9/150 (6%)
 Frame = +1

Query: 37   RRPTPDTSHVATAYPHLTPHQ---VEILVKHGFTNLKQQFSGTGAIEPIFENP------R 189
            ++  P  S+  ++ P+L P     VEIL  HGFT L  Q  GT  I P++ N       +
Sbjct: 777  KKTRPAKSNEKSSSPNLEPLDAPTVEILKLHGFTALTPQHDGTCQIRPVYFNKDIHLRRK 836

Query: 190  ASNFSVAPPTSRSQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRE 369
            A    ++PP     R    +A+S++R +Y++ IDN+RA AYMSDVKNNLTGLVLPKL R+
Sbjct: 837  AVKTDMSPPA----RPFFDLATSLHRGIYTHKIDNRRATAYMSDVKNNLTGLVLPKLDRD 892

Query: 370  TLSAWVALCEHSTREVKLLVIHGAGGAGKS 459
             LS+WVAL E +TREV +L IHGAGGAGKS
Sbjct: 893  LLSSWVALAETTTREVAVLAIHGAGGAGKS 922


>gb|AVK94126.1| replicase [Garlic virus D]
 gb|AVK94131.1| replicase [Garlic virus D]
          Length = 1562

 Score =  130 bits (328), Expect = 3e-32
 Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = +1

Query: 100  VEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVAPPTSRS-QRTVTSMASSIYRQVY 276
            +E+L  HGFTN + Q+ G   I+PIF NP     +         Q+    MA  + RQ Y
Sbjct: 652  IELLKMHGFTNYRAQYDGEDQIQPIFRNPNTKFLTQHTTVGAGPQQCFIDMAHGLRRQCY 711

Query: 277  SYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEHSTREVKLLVIHGAGGAGK 456
             Y I+ KRA A+MSDVKNNLTGLVLPKL R+ LS+WV+L EH+TR+V L+VIHGAGGAGK
Sbjct: 712  EYRINAKRATAFMSDVKNNLTGLVLPKLERDLLSSWVSLAEHATRKVGLIVIHGAGGAGK 771

Query: 457  S 459
            S
Sbjct: 772  S 772


>gb|ALK24278.1| replicase [Garlic virus D]
          Length = 1562

 Score =  129 bits (324), Expect = 1e-31
 Identities = 71/138 (51%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
 Frame = +1

Query: 49   PDTSHVATAYPHLTPHQVEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVAPPT-SR 225
            PD          L    VE+L  HGFTN K Q+ G   I+PIF N  A   +    T + 
Sbjct: 635  PDKPVAKVKLNPLDDDTVELLKIHGFTNYKAQYDGEDQIQPIFRNANARFLTHYTTTVAG 694

Query: 226  SQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEHS 405
             Q+    MA  + R  Y Y I+ KRA A+MSDVKNNLTGLVLPKL R+ LS+WV+L EH+
Sbjct: 695  PQQCFIDMAHGLRRHCYEYRINAKRATAFMSDVKNNLTGLVLPKLERDLLSSWVSLAEHA 754

Query: 406  TREVKLLVIHGAGGAGKS 459
            TR+V L+VIHGAGGAGKS
Sbjct: 755  TRKVGLIVIHGAGGAGKS 772


>ref|YP_008855206.1| replicase [Garlic virus D]
 gb|AHA93785.1| replicase [Garlic virus D]
          Length = 1562

 Score =  129 bits (324), Expect = 1e-31
 Identities = 70/138 (50%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
 Frame = +1

Query: 49   PDTSHVATAYPHLTPHQVEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVAPPT-SR 225
            PD          L    VE+L  HGFTN + Q+ G   I+PIF N  A   +    T + 
Sbjct: 635  PDKPVAKVKLNPLDDDTVELLKIHGFTNFRAQYDGEDQIQPIFRNANAKFLTQYTTTVAG 694

Query: 226  SQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEHS 405
             Q+    MA  + R  Y Y I+ KRA A+MSDVKNNLTGLVLPKL R+ LS+WV+L EH+
Sbjct: 695  PQQCFIDMAHGLRRNCYEYRINAKRATAFMSDVKNNLTGLVLPKLERDLLSSWVSLAEHA 754

Query: 406  TREVKLLVIHGAGGAGKS 459
            TR+V L+VIHGAGGAGKS
Sbjct: 755  TRKVGLIVIHGAGGAGKS 772


>ref|NP_620648.1| replicase [Shallot virus X]
 sp|Q04575.1|RDRP_SHVX RecName: Full=RNA replication protein; AltName: Full=194 kDa protein;
            Includes: RecName: Full=RNA-directed RNA polymerase;
            Includes: RecName: Full=Helicase
 gb|AAA47787.1| replicase [Shallot virus X]
          Length = 1718

 Score =  129 bits (324), Expect = 1e-31
 Identities = 73/150 (48%), Positives = 96/150 (64%), Gaps = 9/150 (6%)
 Frame = +1

Query: 37   RRPTPDTSHVATAYPHLTPHQ---VEILVKHGFTNLKQQFSGTGAIEPIFENP------R 189
            ++  P   +  ++ P+L P     VEIL  HGFT L  Q  GT  I P++ N       +
Sbjct: 777  KKTHPAKGNEKSSSPNLEPLDAPTVEILKLHGFTALTPQHDGTCQIRPVYFNKDIHLRRK 836

Query: 190  ASNFSVAPPTSRSQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRE 369
            A    ++PP     R    +A+S++R +Y++ IDN+RA AYMSDVKNNLTGLVLPKL R+
Sbjct: 837  AVKTDMSPPA----RPFFDLATSLHRGIYTHKIDNRRATAYMSDVKNNLTGLVLPKLDRD 892

Query: 370  TLSAWVALCEHSTREVKLLVIHGAGGAGKS 459
             LS+WVAL E +TREV +L IHGAGGAGKS
Sbjct: 893  LLSSWVALAETTTREVAVLAIHGAGGAGKS 922


>ref|YP_009389473.1| RNA-dependent RNA polymerase [Vanilla latent virus]
 gb|ASJ78783.1| RNA-dependent RNA polymerase [Vanilla latent virus]
          Length = 1423

 Score =  127 bits (319), Expect = 5e-31
 Identities = 69/119 (57%), Positives = 80/119 (67%)
 Frame = +1

Query: 103 EILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVAPPTSRSQRTVTSMASSIYRQVYSY 282
           EIL  HGFT LKQQ  G   I P++ N +     +     ++     SMA+ I R  Y Y
Sbjct: 562 EILRIHGFTALKQQSDGISPIMPVYFNDKTDQ--LCKSKIQTGCPFMSMATDIKRHFYDY 619

Query: 283 PIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEHSTREVKLLVIHGAGGAGKS 459
            IDN+R  AYMSDVKNNLTGLVLPKLSRETL AWV+L E+S R + LLVIHGAGGAGKS
Sbjct: 620 TIDNRRGQAYMSDVKNNLTGLVLPKLSRETLQAWVSLAENSKRTIPLLVIHGAGGAGKS 678


>gb|AGG13306.1| Replicase [Garlic virus X]
          Length = 1543

 Score =  127 bits (318), Expect = 7e-31
 Identities = 75/153 (49%), Positives = 93/153 (60%), Gaps = 4/153 (2%)
 Frame = +1

Query: 13   PPRTCETARRPTPDTSHVATAYPHLTPHQVEILVKHGFTNLKQQFSGTGAIEPIFENPRA 192
            P  T       +  TS V      L    VEIL  HGFTN K Q  G   I P+F N +A
Sbjct: 607  PGETANELESASKTTSRVELV--PLDSETVEILKLHGFTNHKPQHDGDFQISPVFYNRQA 664

Query: 193  SNFSVAPP----TSRSQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKL 360
            +   + PP    T+  Q +   MA ++ R  YSY +D KRA A+MSDVKNNLTGLVLPKL
Sbjct: 665  N---LLPPYDGITNSVQSSFIQMAQALKRNCYSYKLDAKRATAFMSDVKNNLTGLVLPKL 721

Query: 361  SRETLSAWVALCEHSTREVKLLVIHGAGGAGKS 459
             R+ L++WVAL E++ R+V L+VIHGAGGAGKS
Sbjct: 722  DRDLLTSWVALSENAHRKVGLIVIHGAGGAGKS 754


>gb|AGG13276.1| Replicase [Garlic virus A]
          Length = 1600

 Score =  125 bits (314), Expect = 2e-30
 Identities = 72/138 (52%), Positives = 91/138 (65%), Gaps = 8/138 (5%)
 Frame = +1

Query: 70   TAYPHLTP---HQVEILVKHGFTNLKQQFSGTGAIEPIFENPRASNF-----SVAPPTSR 225
            +A P L P     ++IL  HGFT L+ Q  G   I+P++ N +         +   PT++
Sbjct: 675  SARPKLEPLDQETIDILKLHGFTALQPQHDGAEQIQPVYFNSKVKTHRRLEVNELCPTAQ 734

Query: 226  SQRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEHS 405
               T   +A+SI R VY+Y + NKRA AYMSDVKNNLTGLVLPKL RE LS+WVAL E +
Sbjct: 735  PFAT---LAASIRRGVYNYKLCNKRATAYMSDVKNNLTGLVLPKLDRELLSSWVALAERT 791

Query: 406  TREVKLLVIHGAGGAGKS 459
            TR+V +LVIHGAGGAGKS
Sbjct: 792  TRDVGVLVIHGAGGAGKS 809


>gb|AFV61767.1| replicase [Garlic virus X]
          Length = 1544

 Score =  124 bits (312), Expect = 4e-30
 Identities = 71/140 (50%), Positives = 90/140 (64%), Gaps = 4/140 (2%)
 Frame = +1

Query: 52   DTSHVATAYPHLTP---HQVEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVAPPTS 222
            ++S   T+   LTP     VEIL  HGFTN K Q  G   I P+F N +A    +    +
Sbjct: 616  ESSPKITSRVDLTPLDSDTVEILKLHGFTNYKPQHDGDFQIAPVFYNHQACQLPLYDGIT 675

Query: 223  RS-QRTVTSMASSIYRQVYSYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCE 399
             S Q     MA ++ R  Y+Y +D KRA A+MSDVKNNLTGLVLPKL R+ L++WVAL E
Sbjct: 676  NSVQSKFIEMAHALKRNCYNYTLDAKRATAFMSDVKNNLTGLVLPKLDRDLLTSWVALSE 735

Query: 400  HSTREVKLLVIHGAGGAGKS 459
            ++ R+V L+VIHGAGGAGKS
Sbjct: 736  NACRKVGLIVIHGAGGAGKS 755


>ref|NP_569132.1| replicase [Garlic virus C]
 dbj|BAA61818.1| replicase [Garlic virus C]
          Length = 1550

 Score =  124 bits (312), Expect = 4e-30
 Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = +1

Query: 100  VEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVAPP-TSRSQRTVTSMASSIYRQVY 276
            +EIL  HGFTNLK Q  G   I P+F N  A +       T+ +Q    +MA ++ R  Y
Sbjct: 643  IEILKIHGFTNLKPQHDGEFQIAPVFYNRLAKHIPTYEGITTTTQSQFIAMAQALKRNCY 702

Query: 277  SYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEHSTREVKLLVIHGAGGAGK 456
             Y +D KRA A+MSDVKNNLTGLVLPKL R+ L++WVAL E++ R V L+VIHGAGGAGK
Sbjct: 703  RYKLDAKRATAFMSDVKNNLTGLVLPKLDRDLLTSWVALAENAKRSVGLIVIHGAGGAGK 762

Query: 457  S 459
            S
Sbjct: 763  S 763


>gb|AGG13300.1| Replicase [Garlic virus C]
          Length = 1550

 Score =  124 bits (312), Expect = 4e-30
 Identities = 66/121 (54%), Positives = 82/121 (67%), Gaps = 1/121 (0%)
 Frame = +1

Query: 100  VEILVKHGFTNLKQQFSGTGAIEPIFENPRASNFSVAPP-TSRSQRTVTSMASSIYRQVY 276
            +EIL  HGFTNLK Q  G   I P+F N  A +       T+ +Q    +MA ++ R  Y
Sbjct: 643  IEILKIHGFTNLKPQHDGEFQIAPVFYNRLAKHIPTYEGITTTTQSQFIAMAQALKRNCY 702

Query: 277  SYPIDNKRAAAYMSDVKNNLTGLVLPKLSRETLSAWVALCEHSTREVKLLVIHGAGGAGK 456
             Y +D KRA A+MSDVKNNLTGLVLPKL R+ L++WVAL E++ R V L+VIHGAGGAGK
Sbjct: 703  RYKLDAKRATAFMSDVKNNLTGLVLPKLDRDLLTSWVALAENAKRSVGLIVIHGAGGAGK 762

Query: 457  S 459
            S
Sbjct: 763  S 763