BLASTX nr result

ID: Chrysanthemum21_contig00024283 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00024283
         (868 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM67028.1| late elongated hypocotyl-like [Chrysanthemum set...    65   4e-12

>dbj|BAM67028.1| late elongated hypocotyl-like [Chrysanthemum seticuspe f. boreale]
          Length = 686

 Score = 64.7 bits (156), Expect(2) = 4e-12
 Identities = 30/39 (76%), Positives = 33/39 (84%)
 Frame = +2

Query: 239 YKKCSVEAKESEIVTASAGSRHNDEKCPKRMHLEEGTSS 355
           YK+CS+EAKESEIVTASAGS  NDEKCPKRM LE   S+
Sbjct: 648 YKRCSIEAKESEIVTASAGSSQNDEKCPKRMRLEAEAST 686



 Score = 35.4 bits (80), Expect(2) = 4e-12
 Identities = 16/26 (61%), Positives = 19/26 (73%)
 Frame = +3

Query: 162 VYRSGRSMEEWVLRMGLARVKLNVHH 239
           V +   +MEE VL+MGL  VKLNVHH
Sbjct: 617 VLKGDTNMEEGVLKMGLGSVKLNVHH 642


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