BLASTX nr result
ID: Chrysanthemum21_contig00023849
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Chrysanthemum21_contig00023849
(883 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_023753232.1| RNA polymerase sigma factor sigA-like [Lactu... 221 5e-65
gb|KVI04620.1| RNA polymerase sigma-70 [Cynara cardunculus var. ... 197 8e-56
gb|KVI10078.1| RNA polymerase sigma-70 [Cynara cardunculus var. ... 191 1e-53
ref|XP_023743973.1| RNA polymerase sigma factor sigA-like [Lactu... 179 5e-49
ref|XP_022038093.1| RNA polymerase sigma factor sigA-like [Helia... 174 6e-47
ref|XP_022006580.1| RNA polymerase sigma factor sigA-like [Helia... 170 1e-45
gb|PLY90261.1| hypothetical protein LSAT_8X14040 [Lactuca sativa] 165 8e-44
ref|XP_023757341.1| RNA polymerase sigma factor sigA-like [Lactu... 165 8e-44
ref|XP_016484511.1| PREDICTED: RNA polymerase sigma factor sigA-... 160 1e-42
ref|XP_019263250.1| PREDICTED: RNA polymerase sigma factor sigA-... 160 3e-42
ref|XP_009767654.1| PREDICTED: RNA polymerase sigma factor sigA-... 160 5e-42
ref|XP_019263249.1| PREDICTED: RNA polymerase sigma factor sigA-... 160 7e-42
ref|XP_019259164.1| PREDICTED: RNA polymerase sigma factor sigA-... 156 2e-40
ref|XP_015070237.1| PREDICTED: RNA polymerase sigma factor sigA ... 154 1e-39
ref|NP_001312542.1| RNA polymerase sigma factor sigA-like [Nicot... 154 2e-39
ref|XP_009771934.1| PREDICTED: RNA polymerase sigma factor sigA ... 154 2e-39
gb|PIN10784.1| hypothetical protein CDL12_16623 [Handroanthus im... 150 2e-39
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA ... 152 8e-39
ref|XP_023877044.1| RNA polymerase sigma factor sigA isoform X1 ... 152 1e-38
ref|XP_023877046.1| RNA polymerase sigma factor sigA isoform X2 ... 152 1e-38
>ref|XP_023753232.1| RNA polymerase sigma factor sigA-like [Lactuca sativa]
ref|XP_023753233.1| RNA polymerase sigma factor sigA-like [Lactuca sativa]
ref|XP_023753234.1| RNA polymerase sigma factor sigA-like [Lactuca sativa]
gb|PLY93468.1| hypothetical protein LSAT_9X50600 [Lactuca sativa]
Length = 486
Score = 221 bits (562), Expect = 5e-65
Identities = 126/237 (53%), Positives = 152/237 (64%), Gaps = 12/237 (5%)
Frame = -1
Query: 676 MMSXXXXXXXXXTRLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN------- 518
MMS L+GSSYFYS+TTEK SC+ D+++TF+ TKN I AKK SN
Sbjct: 1 MMSTTAIGLRATNSLLGSSYFYSDTTEKFSCNGDISFTFVTTKNTITAKKQSNYSHSLTS 60
Query: 517 ---RDSNGRRALKEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXX 347
DS+ RALK+H + ++P STDQWVQ F LED+ ++ E
Sbjct: 61 KRDTDSHSIRALKQHVATSSDPSISTDQWVQRFHHLEDKSSEQELPVEALLLLQSFLEKQ 120
Query: 346 QWKIST--SVNTAIATPTEKSLKKVHVTGSQISARKRRLDAQKKTLNICSDMQSTIGSEL 173
WK+ T + NT TPTEK KK+H+ SQISARKRR++A+KKT N CS+ IGSEL
Sbjct: 121 -WKLPTEKNTNTTTDTPTEKDSKKIHIISSQISARKRRIEARKKTPNSCSE----IGSEL 175
Query: 172 FRNQFKGYVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
+NQFKG+VKG SE LLT SEVI+LSKKIK GL LEEQK RLK KLG EPSE QLA
Sbjct: 176 LQNQFKGHVKGVRSEGLLTQSEVIILSKKIKIGLRLEEQKSRLKEKLGYEPSEGQLA 232
>gb|KVI04620.1| RNA polymerase sigma-70 [Cynara cardunculus var. scolymus]
Length = 507
Score = 197 bits (501), Expect = 8e-56
Identities = 116/232 (50%), Positives = 148/232 (63%), Gaps = 20/232 (8%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN-----------RDSNGRRAL 491
RL+GSS +YS+ +EKLSCSSDL + F+ TKN I AKKSSN +DS+ RAL
Sbjct: 15 RLLGSSSYYSDVSEKLSCSSDLGFIFVPTKNVITAKKSSNYGHGFISNRLNQDSHYIRAL 74
Query: 490 KEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAI 311
KEH ++P SS DQWVQ F+ LE+EG + + QW +ST
Sbjct: 75 KEHVDTASDP-SSIDQWVQGFEHLEEEGDQ-DFSVEALLLLQKSFLEKQWNLSTERTLTT 132
Query: 310 ATPTEKSLKKVHVTGSQISARKRRLDAQKKTLNIC---------SDMQSTIGSELFRNQF 158
ATPTEK+ KK++VTGS SAR+RR+DAQ+KT N ++S I EL +N+
Sbjct: 133 ATPTEKNTKKMYVTGSGKSARRRRIDAQRKTPNRSFSPIQDGGKKQLRSIISPELLQNRT 192
Query: 157 KGYVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
+GY KG S+ LLTH+EV+VLSKK+K G +LEE+K RLK LGSEPSEEQLA
Sbjct: 193 RGYFKGVISDTLLTHAEVVVLSKKVKIGQHLEERKSRLKKSLGSEPSEEQLA 244
>gb|KVI10078.1| RNA polymerase sigma-70 [Cynara cardunculus var. scolymus]
Length = 504
Score = 191 bits (486), Expect = 1e-53
Identities = 112/228 (49%), Positives = 148/228 (64%), Gaps = 17/228 (7%)
Frame = -1
Query: 634 LMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN--------RDSNGRRALKEHA 479
L+GSS +YS+ ++KLSCSS+L + F+ N I +KKSSN RD++ RALKEH
Sbjct: 16 LLGSSPYYSDVSDKLSCSSNLGFIFVPATNLIASKKSSNYGHGFIYSRDTHSIRALKEHV 75
Query: 478 SIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAIATPT 299
+ L STDQWVQ FD L++E ++HE QW +ST T A PT
Sbjct: 76 DTALD-LPSTDQWVQKFDHLDEEVSEHELSVEALLLLHKSLLEKQWTLSTE-RTTTANPT 133
Query: 298 EKSLKKVHVTGSQISARKRRLDAQKKTLNI-CS--------DMQSTIGSELFRNQFKGYV 146
E++ +KVHVTGS ISAR+RR+DAQ KT + CS ++S I EL +N +GY+
Sbjct: 134 ERNSRKVHVTGSGISARRRRIDAQNKTASRNCSVNQVGGSRQLRSIISPELLQNCQRGYL 193
Query: 145 KGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
KG +E LLTHSEV+ LS+KIK GL+LEE+K RLK +LG+EPSE+QLA
Sbjct: 194 KGVRNEALLTHSEVVALSEKIKIGLHLEEEKSRLKERLGTEPSEKQLA 241
>ref|XP_023743973.1| RNA polymerase sigma factor sigA-like [Lactuca sativa]
ref|XP_023743974.1| RNA polymerase sigma factor sigA-like [Lactuca sativa]
gb|PLY66068.1| hypothetical protein LSAT_2X127081 [Lactuca sativa]
Length = 498
Score = 179 bits (454), Expect = 5e-49
Identities = 105/227 (46%), Positives = 143/227 (62%), Gaps = 15/227 (6%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN--------RDSNGRRALKEH 482
R++ SS +YS+ EKLSCSS+L +T++ T N I++KKS N RD++ RALKEH
Sbjct: 15 RILCSSSYYSDVNEKLSCSSNLGFTYVPTTNLISSKKSPNYTHSITRSRDTSPVRALKEH 74
Query: 481 ASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAIATP 302
P TD+WVQ FD L++E ++H+ QW +ST T
Sbjct: 75 VDTTVAP-PITDKWVQGFDHLDEEVSEHDLPVDALLLLHKSLLEKQWTLSTDAPTK---- 129
Query: 301 TEKSLKKVHVTGSQISARKRRLDAQKKTLNICSD-------MQSTIGSELFRNQFKGYVK 143
+KS +KVHVTGS +SAR+RR++AQ K + D ++S I EL +N KGY+K
Sbjct: 130 -DKSSRKVHVTGSGVSARRRRINAQNKKPTVNEDGGIGNKQLRSIISPELVQNCQKGYLK 188
Query: 142 GEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
G ++E LLTHSEV+ LS+KIK GL+LEE+K RLK +LGSEPSE+QLA
Sbjct: 189 GMKNETLLTHSEVVALSEKIKIGLHLEEEKSRLKERLGSEPSEKQLA 235
>ref|XP_022038093.1| RNA polymerase sigma factor sigA-like [Helianthus annuus]
ref|XP_022038094.1| RNA polymerase sigma factor sigA-like [Helianthus annuus]
gb|OTG25137.1| putative sigma factor A [Helianthus annuus]
Length = 508
Score = 174 bits (440), Expect = 6e-47
Identities = 105/232 (45%), Positives = 136/232 (58%), Gaps = 20/232 (8%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN-----------RDSNGRRAL 491
RL+ SS +YS+ TEKL SS+L + + TKN I AKKS+N +D+ RAL
Sbjct: 15 RLLSSSSYYSDVTEKLPSSSELGFVAVPTKNVIAAKKSTNYGHGFIPKRHNQDTRYIRAL 74
Query: 490 KEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAI 311
KEH + A+ SS DQWVQ F+ + +E + E QW +ST
Sbjct: 75 KEHVNT-ASGFSSIDQWVQGFEHIVNEDSDQEFSVEALLSLQKSLLEKQWSLSTETTLTK 133
Query: 310 ATPTEKSLKKVHVTGSQISARKRRLDAQKKTLN---------ICSDMQSTIGSELFRNQF 158
PTEKS K+++V GS SAR+RR+DAQ+KT N ++ I EL +N+
Sbjct: 134 VNPTEKSSKRIYVNGSGKSARRRRIDAQRKTTNKRFSSNEVGTKKPLKFVISPELLQNRA 193
Query: 157 KGYVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
GYVKG S+ LLTH+EV+VLSKKIK G LEE+K RLK +LGSEPSE QLA
Sbjct: 194 SGYVKGITSDTLLTHAEVVVLSKKIKIGQRLEERKSRLKERLGSEPSEVQLA 245
>ref|XP_022006580.1| RNA polymerase sigma factor sigA-like [Helianthus annuus]
gb|OTF99853.1| putative RNA polymerase sigma-F type, RNA polymerase sigma-70 like
domain protein [Helianthus annuus]
Length = 497
Score = 170 bits (430), Expect = 1e-45
Identities = 104/226 (46%), Positives = 142/226 (62%), Gaps = 14/226 (6%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN--------RDSNGRRALKEH 482
RL+GSS +YS +EKLSCSS++ + F+ T ++I +KKS+N RD++ RA+KEH
Sbjct: 15 RLLGSSSYYSEVSEKLSCSSNIGFIFVPTTSSIISKKSTNYSHSLVNKRDTHPTRAVKEH 74
Query: 481 ASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAIATP 302
+ S+TDQWV FD L++E ++HE QW ++T
Sbjct: 75 VDTALDS-STTDQWVHRFDYLDEEVSEHEFPVDALLLLHKSLLEKQWTLTTEETIT---- 129
Query: 301 TEKSLKKVHVTGSQISARKRRLDAQKKTL-NICSD-----MQSTIGSELFRNQFKGYVKG 140
TEK KKV VTGS +SAR+RRL+AQ KTL C D ++S I EL ++ K Y+KG
Sbjct: 130 TEKKSKKV-VTGSGVSARRRRLNAQNKTLAKNCQDGGNKQLRSIISPELLQSYQKAYLKG 188
Query: 139 EESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
++E LLTHSEV+ LS+KIK GL LEE+K LK +LG+EPSE+QLA
Sbjct: 189 VKNEALLTHSEVVALSEKIKIGLQLEEEKSSLKERLGTEPSEKQLA 234
>gb|PLY90261.1| hypothetical protein LSAT_8X14040 [Lactuca sativa]
Length = 497
Score = 165 bits (418), Expect = 8e-44
Identities = 100/223 (44%), Positives = 136/223 (60%), Gaps = 11/223 (4%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN-----------RDSNGRRAL 491
RL+GSS +YS+ EKLSCS+DL + + KN I AKKSSN +D++ RAL
Sbjct: 14 RLLGSSSYYSDVNEKLSCSTDLGFISVPNKNMITAKKSSNYGHGFISNRHNQDTHYIRAL 73
Query: 490 KEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAI 311
KEH I ++P SS WVQ + L++E + + QW +S
Sbjct: 74 KEHVDITSDP-SSIHPWVQGSEHLKEEDSDQDFSVDALLLFQKSLLEKQWNLSNKGALTT 132
Query: 310 ATPTEKSLKKVHVTGSQISARKRRLDAQKKTLNICSDMQSTIGSELFRNQFKGYVKGEES 131
PT+KS +K++V+GS SAR+RR+DAQKKT N ++ I +L +N+ VKG S
Sbjct: 133 VNPTDKSSRKMYVSGSGKSARRRRIDAQKKTPNKRC-IRFVISPDLLQNRAIANVKGITS 191
Query: 130 EVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
+ LLTH+EV+VLSKKIK G +LE+QK RLK +LG EPSE+QLA
Sbjct: 192 DSLLTHAEVVVLSKKIKIGQHLEDQKSRLKERLGCEPSEDQLA 234
>ref|XP_023757341.1| RNA polymerase sigma factor sigA-like [Lactuca sativa]
ref|XP_023757342.1| RNA polymerase sigma factor sigA-like [Lactuca sativa]
Length = 498
Score = 165 bits (418), Expect = 8e-44
Identities = 100/223 (44%), Positives = 136/223 (60%), Gaps = 11/223 (4%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN-----------RDSNGRRAL 491
RL+GSS +YS+ EKLSCS+DL + + KN I AKKSSN +D++ RAL
Sbjct: 15 RLLGSSSYYSDVNEKLSCSTDLGFISVPNKNMITAKKSSNYGHGFISNRHNQDTHYIRAL 74
Query: 490 KEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAI 311
KEH I ++P SS WVQ + L++E + + QW +S
Sbjct: 75 KEHVDITSDP-SSIHPWVQGSEHLKEEDSDQDFSVDALLLFQKSLLEKQWNLSNKGALTT 133
Query: 310 ATPTEKSLKKVHVTGSQISARKRRLDAQKKTLNICSDMQSTIGSELFRNQFKGYVKGEES 131
PT+KS +K++V+GS SAR+RR+DAQKKT N ++ I +L +N+ VKG S
Sbjct: 134 VNPTDKSSRKMYVSGSGKSARRRRIDAQKKTPNKRC-IRFVISPDLLQNRAIANVKGITS 192
Query: 130 EVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
+ LLTH+EV+VLSKKIK G +LE+QK RLK +LG EPSE+QLA
Sbjct: 193 DSLLTHAEVVVLSKKIKIGQHLEDQKSRLKERLGCEPSEDQLA 235
>ref|XP_016484511.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
[Nicotiana tabacum]
Length = 435
Score = 160 bits (406), Expect = 1e-42
Identities = 101/230 (43%), Positives = 131/230 (56%), Gaps = 18/230 (7%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN--------RDSNGRRALKEH 482
R++ SS+ YS+ TEKLSC+SD + F TKN INAKKSSN R +ALKEH
Sbjct: 12 RILSSSFSYSDLTEKLSCASDPCHQFPSTKNVINAKKSSNYSPSYVSNRKKQSVKALKEH 71
Query: 481 ASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAIATP 302
I +N S T+ WVQ F +L++ E QW +S +
Sbjct: 72 VDIASNRDSYTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLENQWNLSAEKAMTDSLQ 131
Query: 301 TEK-SLKKVHVTGSQISARKRRLDAQKKTL----NICSDMQS-----TIGSELFRNQFKG 152
EK S KK+ +T S SAR+RR+D +K+ L + SD S IG EL +N+ KG
Sbjct: 132 NEKNSKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSDSSSKRLRPVIGPELLQNRSKG 191
Query: 151 YVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
Y+ G + LLTH+EV+ LSKKIK GL LEEQK RLK +LG EPS++QLA
Sbjct: 192 YINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQLA 241
>ref|XP_019263250.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X2
[Nicotiana attenuata]
Length = 447
Score = 160 bits (405), Expect = 3e-42
Identities = 98/230 (42%), Positives = 130/230 (56%), Gaps = 18/230 (7%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN--------RDSNGRRALKEH 482
R++ SS+ YS+ TEKLSC+SD + F TKN INAKKSSN R +ALKEH
Sbjct: 12 RILSSSFSYSDLTEKLSCASDPCHQFPSTKNVINAKKSSNYSPSYVSNRKKQSVKALKEH 71
Query: 481 ASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAIATP 302
I +N S T+ WVQ F +L++ E QW +S +
Sbjct: 72 VDIASNRDSDTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLEKQWNLSAEKAMTDSLQ 131
Query: 301 TEK-SLKKVHVTGSQISARKRRLDAQKKTL---------NICSDMQSTIGSELFRNQFKG 152
EK S KK+ +T S SAR+RR+D +K+ L + ++ IG EL +N+ KG
Sbjct: 132 NEKNSKKKMQITCSGTSARRRRMDTRKRDLLPKNSAISNSSSKRLRPVIGPELLQNRSKG 191
Query: 151 YVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
Y+ G + LLTH+EV+ LSKKIK GL LEEQK RLK +LG EPS++QLA
Sbjct: 192 YINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQLA 241
>ref|XP_009767654.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nicotiana
sylvestris]
ref|XP_016484510.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
[Nicotiana tabacum]
Length = 504
Score = 160 bits (406), Expect = 5e-42
Identities = 101/230 (43%), Positives = 131/230 (56%), Gaps = 18/230 (7%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN--------RDSNGRRALKEH 482
R++ SS+ YS+ TEKLSC+SD + F TKN INAKKSSN R +ALKEH
Sbjct: 12 RILSSSFSYSDLTEKLSCASDPCHQFPSTKNVINAKKSSNYSPSYVSNRKKQSVKALKEH 71
Query: 481 ASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAIATP 302
I +N S T+ WVQ F +L++ E QW +S +
Sbjct: 72 VDIASNRDSYTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLENQWNLSAEKAMTDSLQ 131
Query: 301 TEK-SLKKVHVTGSQISARKRRLDAQKKTL----NICSDMQS-----TIGSELFRNQFKG 152
EK S KK+ +T S SAR+RR+D +K+ L + SD S IG EL +N+ KG
Sbjct: 132 NEKNSKKKMQITCSGTSARRRRMDTRKRDLLPKNSATSDSSSKRLRPVIGPELLQNRSKG 191
Query: 151 YVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
Y+ G + LLTH+EV+ LSKKIK GL LEEQK RLK +LG EPS++QLA
Sbjct: 192 YINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQLA 241
>ref|XP_019263249.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
[Nicotiana attenuata]
gb|OIT37280.1| rna polymerase sigma factor siga [Nicotiana attenuata]
Length = 504
Score = 160 bits (405), Expect = 7e-42
Identities = 98/230 (42%), Positives = 130/230 (56%), Gaps = 18/230 (7%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLAYTFIFTKNAINAKKSSN--------RDSNGRRALKEH 482
R++ SS+ YS+ TEKLSC+SD + F TKN INAKKSSN R +ALKEH
Sbjct: 12 RILSSSFSYSDLTEKLSCASDPCHQFPSTKNVINAKKSSNYSPSYVSNRKKQSVKALKEH 71
Query: 481 ASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAIATP 302
I +N S T+ WVQ F +L++ E QW +S +
Sbjct: 72 VDIASNRDSDTEPWVQMFKQLQNGSCSEEDSVEVLLLLQKSMLEKQWNLSAEKAMTDSLQ 131
Query: 301 TEK-SLKKVHVTGSQISARKRRLDAQKKTL---------NICSDMQSTIGSELFRNQFKG 152
EK S KK+ +T S SAR+RR+D +K+ L + ++ IG EL +N+ KG
Sbjct: 132 NEKNSKKKMQITCSGTSARRRRMDTRKRDLLPKNSAISNSSSKRLRPVIGPELLQNRSKG 191
Query: 151 YVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
Y+ G + LLTH+EV+ LSKKIK GL LEEQK RLK +LG EPS++QLA
Sbjct: 192 YINGVVGQELLTHTEVVQLSKKIKFGLYLEEQKSRLKERLGCEPSDDQLA 241
>ref|XP_019259164.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nicotiana
attenuata]
gb|OIT40023.1| rna polymerase sigma factor siga [Nicotiana attenuata]
Length = 508
Score = 156 bits (395), Expect = 2e-40
Identities = 95/232 (40%), Positives = 134/232 (57%), Gaps = 20/232 (8%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLA---YTFIFTKNAINAKKSS--------NRDSNGRRAL 491
RL+ SS++YS+ EKL+C+SD + + KN INAKKSS +R +AL
Sbjct: 15 RLLSSSFYYSDLIEKLNCTSDHSLPCHQVPSVKNVINAKKSSGYSHSCVSSRKPQSAKAL 74
Query: 490 KEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAI 311
KEH + A+P S W + F++L++E + QW +S
Sbjct: 75 KEHVDVTADP-SDVPSWFEMFEQLQNESDDEDDSVEVLLLLQKSMLEKQWNLSLEQTLTA 133
Query: 310 ATPTEKSLKKVHVTGSQISARKRRLDAQKKTLNICSD---------MQSTIGSELFRNQF 158
+ EK KK+H+T S SAR+RR+D++++ L+ S ++S IG EL +N+
Sbjct: 134 SPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPLRSIIGPELLQNRL 193
Query: 157 KGYVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
KGYVKG SE LLTH+EV+ LSKKI+ GL LEEQK RLK +LG EPS++QLA
Sbjct: 194 KGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPSDDQLA 245
>ref|XP_015070237.1| PREDICTED: RNA polymerase sigma factor sigA [Solanum pennellii]
Length = 509
Score = 154 bits (390), Expect = 1e-39
Identities = 94/233 (40%), Positives = 135/233 (57%), Gaps = 21/233 (9%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLA---YTFIFTKNAINAKKSSN--------RDSNGRRAL 491
RL+ SS++YS+ EKLSCSSD + + KN I+AKKSS+ R +AL
Sbjct: 15 RLLSSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYSPSCVSSRKLQSVKAL 74
Query: 490 KEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQ-WKISTSVNTA 314
KEH I ++P S W + F++L++E E + W +S
Sbjct: 75 KEHVDIASDP-SDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKSMLEKQWNLSAEETLT 133
Query: 313 IATPTEKSLKKVHVTGSQISARKRRLDAQKKTL---------NICSDMQSTIGSELFRNQ 161
+T EK+ KK+H+ S SAR+RR+D++++ L + ++S +G EL +N+
Sbjct: 134 ASTQHEKNCKKMHIACSGTSARRRRMDSRQRVLAQKSSATPISATKPLRSILGPELLQNR 193
Query: 160 FKGYVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
KGYVKG SE LLTH+EV+ LSKKIK GL++EEQK RLK +LG EPS++QLA
Sbjct: 194 LKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLGCEPSDDQLA 246
>ref|NP_001312542.1| RNA polymerase sigma factor sigA-like [Nicotiana tabacum]
ref|XP_016474122.1| PREDICTED: RNA polymerase sigma factor sigA-like [Nicotiana
tabacum]
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
Length = 508
Score = 154 bits (388), Expect = 2e-39
Identities = 94/232 (40%), Positives = 134/232 (57%), Gaps = 20/232 (8%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLA---YTFIFTKNAINAKKSSN--------RDSNGRRAL 491
RL+ SS++YS+ EKL+C+SD + + KN I AKKSS+ R S ++L
Sbjct: 15 RLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSPSCVSSRKSQSAKSL 74
Query: 490 KEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAI 311
KEH I A+P S W + +++L++E + QW +S
Sbjct: 75 KEHVDITADP-SDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSMLEKQWNLSLEQTLTA 133
Query: 310 ATPTEKSLKKVHVTGSQISARKRRLDAQKKTLNICSD---------MQSTIGSELFRNQF 158
+ EK KK+H+T S SAR+RR+D++++ L+ S ++S IG EL +N+
Sbjct: 134 SPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPLRSIIGPELLQNRL 193
Query: 157 KGYVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
KGYVKG SE LLTH+EV+ LSKKI+ GL LEEQK RLK +LG EPS++QLA
Sbjct: 194 KGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPSDDQLA 245
>ref|XP_009771934.1| PREDICTED: RNA polymerase sigma factor sigA [Nicotiana sylvestris]
Length = 508
Score = 154 bits (388), Expect = 2e-39
Identities = 94/232 (40%), Positives = 134/232 (57%), Gaps = 20/232 (8%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLA---YTFIFTKNAINAKKSSN--------RDSNGRRAL 491
RL+ SS++YS+ EKL+C+SD + + KN I AKKSS+ R S ++L
Sbjct: 15 RLLSSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYSPSCVSSRKSQSTKSL 74
Query: 490 KEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTAI 311
KEH I A+P S W + +++L++E + QW +S
Sbjct: 75 KEHVDITADP-SDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSMLEKQWNLSLEQTLTA 133
Query: 310 ATPTEKSLKKVHVTGSQISARKRRLDAQKKTLNICSD---------MQSTIGSELFRNQF 158
+ EK KK+H+T S SAR+RR+D++++ L+ S ++S IG EL +N+
Sbjct: 134 SPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPLRSIIGPELLQNRL 193
Query: 157 KGYVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
KGYVKG SE LLTH+EV+ LSKKI+ GL LEEQK RLK +LG EPS++QLA
Sbjct: 194 KGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEPSDDQLA 245
>gb|PIN10784.1| hypothetical protein CDL12_16623 [Handroanthus impetiginosus]
Length = 370
Score = 150 bits (380), Expect = 2e-39
Identities = 98/230 (42%), Positives = 129/230 (56%), Gaps = 20/230 (8%)
Frame = -1
Query: 631 MGSSYFYSNTTEKLSCSS-DLAYTFIFTKNAINAKKSSNRDSNGR----RALKEHASIGA 467
+GS++FYS+ EKL+C+S D Y +KNAI AKKSSN SN R RALKEH +
Sbjct: 19 LGSTFFYSDLAEKLACTSTDPNYQIASSKNAITAKKSSNFISNRRPQSIRALKEHLDAAS 78
Query: 466 NPLSSTDQWV----QSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTA--IAT 305
NP + + W+ L DE + HE QW +S + T +
Sbjct: 79 NPCT-LEPWLIHGTSESSLLNDESSNHEYLVDAILLLQKSMLEKQWNLSANQTTTRTVIQ 137
Query: 304 PTEKSLKKVHVTGSQISARKRRLDAQKKTL---------NICSDMQSTIGSELFRNQFKG 152
E KK+ VT S SAR+RR+D++KK L N +S + EL +N+ KG
Sbjct: 138 KGEMEHKKIQVTCSGTSARRRRMDSRKKVLGRKISTSQLNSSKQWRSVVSPELLQNRLKG 197
Query: 151 YVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
YVKG SE LLTH+EV+ LS+KIK GL LE+ K RL+ +LG EPS+EQLA
Sbjct: 198 YVKGVVSEELLTHAEVVQLSQKIKAGLLLEDHKSRLEERLGCEPSDEQLA 247
>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA [Solanum lycopersicum]
Length = 509
Score = 152 bits (384), Expect = 8e-39
Identities = 92/233 (39%), Positives = 135/233 (57%), Gaps = 21/233 (9%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSDLA---YTFIFTKNAINAKKSSN--------RDSNGRRAL 491
RL+ SS++YS+ EKLSCSSD + + KN I+AKKSS+ R +AL
Sbjct: 15 RLLSSSFYYSDLNEKLSCSSDHSLPCHQVPTVKNVISAKKSSDYSPSCVSSRKLQSVKAL 74
Query: 490 KEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQ-WKISTSVNTA 314
KEH I ++P S W + F++L++E E + W +S
Sbjct: 75 KEHVDIASDP-SDVQSWFERFEQLQNESDDEEDDSVEVLLLLQKSMLEKQWNLSAEETLT 133
Query: 313 IATPTEKSLKKVHVTGSQISARKRRLDAQKKTL---------NICSDMQSTIGSELFRNQ 161
+T +K+ KK+H+ S SAR+RR+D++++ L + ++S +G +L +N+
Sbjct: 134 ASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQKSSATPISATKPLRSILGPDLLQNR 193
Query: 160 FKGYVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
KGYVKG SE LLTH+EV+ LSKKIK GL++EEQK RLK +LG EPS++QLA
Sbjct: 194 LKGYVKGIVSEELLTHTEVLQLSKKIKVGLHVEEQKSRLKERLGCEPSDDQLA 246
>ref|XP_023877044.1| RNA polymerase sigma factor sigA isoform X1 [Quercus suber]
ref|XP_023877045.1| RNA polymerase sigma factor sigA isoform X1 [Quercus suber]
gb|POE80414.1| rna polymerase sigma factor siga [Quercus suber]
Length = 509
Score = 152 bits (383), Expect = 1e-38
Identities = 98/233 (42%), Positives = 134/233 (57%), Gaps = 21/233 (9%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSD--LAYTFIF-TKNAINAKKSSN---------RDSNGRRA 494
RL+ SSY+YS+ T+KLS +D LA+ I TK I++KKSSN R + +A
Sbjct: 15 RLLSSSYYYSDLTDKLSYVNDHALAHNQITSTKKVISSKKSSNYSPSITSSNRQTQSIKA 74
Query: 493 LKEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTA 314
+KEH I ++P S+ + WVQ LE+E + QW +S
Sbjct: 75 VKEHVDITSSP-SAEEPWVQRHTSLEEESSDLNYSVEALLLLQKSMLEKQWNLSFEQTVL 133
Query: 313 IATPTEKSLKKVHVTGSQISARKRRLDAQKKTLN---------ICSDMQSTIGSELFRNQ 161
+P + LKK+ VT S +SAR+RR+ +KK LN M+S I EL +N+
Sbjct: 134 TDSPRGRILKKIPVTCSGVSARQRRMTTRKKNLNKNGYMMQPCTSKQMRSMISPELLQNR 193
Query: 160 FKGYVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
KGYVKG SE LTHS+V+ LSKKIKTG++LEE +LRLK +LG EPS++QLA
Sbjct: 194 SKGYVKGVLSEYSLTHSDVVCLSKKIKTGISLEEHRLRLKERLGCEPSDDQLA 246
>ref|XP_023877046.1| RNA polymerase sigma factor sigA isoform X2 [Quercus suber]
Length = 533
Score = 152 bits (383), Expect = 1e-38
Identities = 98/233 (42%), Positives = 134/233 (57%), Gaps = 21/233 (9%)
Frame = -1
Query: 637 RLMGSSYFYSNTTEKLSCSSD--LAYTFIF-TKNAINAKKSSN---------RDSNGRRA 494
RL+ SSY+YS+ T+KLS +D LA+ I TK I++KKSSN R + +A
Sbjct: 15 RLLSSSYYYSDLTDKLSYVNDHALAHNQITSTKKVISSKKSSNYSPSITSSNRQTQSIKA 74
Query: 493 LKEHASIGANPLSSTDQWVQSFDRLEDEGTKHEXXXXXXXXXXXXXXXXQWKISTSVNTA 314
+KEH I ++P S+ + WVQ LE+E + QW +S
Sbjct: 75 VKEHVDITSSP-SAEEPWVQRHTSLEEESSDLNYSVEALLLLQKSMLEKQWNLSFEQTVL 133
Query: 313 IATPTEKSLKKVHVTGSQISARKRRLDAQKKTLN---------ICSDMQSTIGSELFRNQ 161
+P + LKK+ VT S +SAR+RR+ +KK LN M+S I EL +N+
Sbjct: 134 TDSPRGRILKKIPVTCSGVSARQRRMTTRKKNLNKNGYMMQPCTSKQMRSMISPELLQNR 193
Query: 160 FKGYVKGEESEVLLTHSEVIVLSKKIKTGLNLEEQKLRLKTKLGSEPSEEQLA 2
KGYVKG SE LTHS+V+ LSKKIKTG++LEE +LRLK +LG EPS++QLA
Sbjct: 194 SKGYVKGVLSEYSLTHSDVVCLSKKIKTGISLEEHRLRLKERLGCEPSDDQLA 246