BLASTX nr result

ID: Chrysanthemum21_contig00023800 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Chrysanthemum21_contig00023800
         (1137 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_022027087.1| agamous-like MADS-box protein AGL104 [Helian...    42   3e-06

>ref|XP_022027087.1| agamous-like MADS-box protein AGL104 [Helianthus annuus]
 gb|OTG32878.1| putative agamous-like protein [Helianthus annuus]
          Length = 322

 Score = 42.4 bits (98), Expect(2) = 3e-06
 Identities = 26/81 (32%), Positives = 34/81 (41%)
 Frame = +1

Query: 88  LLSNQSSAYHPEVLQVK**YLLKHCA*QESFYNRTRLFFSVSVYTILYMATFEAQQ*GNT 267
           +LSNQ+ AYHP  LQ +                                         ++
Sbjct: 173 MLSNQTPAYHPRALQGE-----------------------------------------SS 191

Query: 268 SKNDDISCWQENVCDDTNRMN 330
           SK++DISCW ENVC DTNR+N
Sbjct: 192 SKDNDISCWPENVCYDTNRIN 212



 Score = 38.9 bits (89), Expect(2) = 3e-06
 Identities = 17/21 (80%), Positives = 20/21 (95%)
 Frame = +3

Query: 3   DIHQEISSLQRQLHMGKEQLR 65
           +IHQEIS+LQ+QLHM KEQLR
Sbjct: 117 EIHQEISTLQQQLHMAKEQLR 137


Top